Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G000950 Citrullus lanatus HOM05D003304 ORTHO05D003762 4.8e-111 404.4 197 100.0
CsaV3_3G014790 Cucumis sativus L. HOM05D003304 ORTHO05D003762 1.8e-52 209.9 171 65.5
MELO3C006676.2 Cucumis melo HOM05D003304 ORTHO05D003762 9.0e-49 197.6 171 63.7
Sed0009993 Sechium edule HOM05D003304 ORTHO05D003762 1.6e-34 150.2 145 57.2
Sed0000258 Sechium edule HOM05D003304 ORTHO05D003762 2.6e-32 142.9 150 60.0
CiPaw.01G146800 Carya illinoinensis HOM05D003304 ORTHO05D003762 2.0e-16 90.1 159 40.3
Thecc.04G287300 Theobroma cacao HOM05D003304 ORTHO05D003762 5.0e-15 85.5 154 40.3
Duzib052G0413 Durio zibethinus HOM05D003304 ORTHO05D003762 6.5e-15 85.1 141 39.7
FAN17G2918 Fragaria x ananassa HOM05D003304 ORTHO05D003762 3.2e-14 82.8 139 41.7
RcHm_v2.0_Chr4g0422951 Rosa chinensis HOM05D003304 ORTHO05D003762 3.6e-13 79.3 144 40.3
Duzib212G1014 Durio zibethinus HOM05D003304 ORTHO05D003762 4.7e-13 79.0 144 39.6
Manes.15G011400 Manihot esculenta HOM05D003304 ORTHO05D003762 6.1e-13 78.6 153 37.3
Sabra10G0007700 Salix brachista HOM05D003304 ORTHO05D003762 8.0e-13 78.2 142 39.4
FAN07G2181 Fragaria x ananassa HOM05D003304 ORTHO05D003762 1.0e-12 77.8 141 39.7
Potri.010G012000 Populus trichocarpa HOM05D003304 ORTHO05D003762 2.3e-12 76.6 144 38.9
QL06p009983 Quercus lobata HOM05D003304 ORTHO05D003762 3.9e-12 75.9 156 40.4
QL93p2007_0071 Quercus lobata HOM05D003304 ORTHO05D003762 3.9e-12 75.9 156 40.4
FAN12G1565 Fragaria x ananassa HOM05D003304 ORTHO05D003762 5.2e-12 75.5 142 38.7
FvH4_4g18460 Fragaria vesca HOM05D003304 ORTHO05D003762 1.1e-11 74.3 142 38.7
ClCG06G005040 Citrullus lanatus HOM05D003304 ORTHO05D003762 2.6e-11 73.2 149 35.6
FAN12G0090 Fragaria x ananassa HOM05D003304 ORTHO05D003762 2.6e-11 73.2 142 38.7
TWI73G0854 Tripterygium wilfordii HOM05D003304 ORTHO05D003762 5.7e-11 72.0 153 38.6
TWI53G1575 Tripterygium wilfordii HOM05D003304 ORTHO05D003762 1.3e-10 70.9 144 37.5
Ciclev10004985m.g Citrus clementina HOM05D003304 ORTHO05D003762 1.7e-10 70.5 139 38.1
Gohir.A10G165400 Gossypium hirsutum HOM05D003304 ORTHO05D003762 1.7e-10 70.5 148 35.1
VMungo1215G1188 Vigna mungo HOM05D003304 ORTHO05D003762 2.2e-10 70.1 141 37.6
Sabra08G0152100 Salix brachista HOM05D003304 ORTHO05D003762 3.7e-10 69.3 140 36.4
Cpa.g.sc16.193 Carica papaya HOM05D003304 ORTHO05D003762 8.2e-10 68.2 146 35.6
GSVIVG01035139001 Vitis vinifera HOM05D003304 ORTHO05D003762 8.2e-10 68.2 140 37.9
TWI09G1044 Tripterygium wilfordii HOM05D003304 ORTHO05D003762 1.4e-09 67.4 144 39.6
Lj4g0014231 Lotus japonicus HOM05D003304 ORTHO05D003762 2.4e-09 66.6 150 37.3
MD16G1166700 Malus domestica HOM05D003304 ORTHO05D003762 4.1e-09 65.9 143 37.1
Gohir.D10G171500 Gossypium hirsutum HOM05D003304 ORTHO05D003762 7.0e-09 65.1 152 33.6
Lalb_Chr15g0083391 Lupinus albus HOM05D003304 ORTHO05D003762 7.0e-09 65.1 140 37.1
CsaV3_6G023920 Cucumis sativus L. HOM05D003304 ORTHO05D003762 2.6e-08 63.2 150 36.0
Gorai.011G191600 Gossypium raimondii HOM05D003304 ORTHO05D003762 4.5e-08 62.4 152 32.9
TAR622G1126 Trochodendron aralioides HOM05D003304 ORTHO05D003762 4.5e-08 62.4 141 34.8
MELO3C021319.2 Cucumis melo HOM05D003304 ORTHO05D003762 5.9e-08 62.0 150 35.3
Glyma.17G027500 Glycine max HOM05D003304 ORTHO05D003762 1.0e-07 61.2 119 37.8
Lj6g0014556 Lotus japonicus HOM05D003304 ORTHO05D003762 1.0e-07 61.2 140 35.0
Sed0002765 Sechium edule HOM05D003304 ORTHO05D003762 1.3e-07 60.8 141 36.2
MD13G1166900 Malus domestica HOM05D003304 ORTHO05D003762 1.7e-07 60.5 142 35.2
Phvul.003G096600 Phaseolus vulgaris HOM05D003304 ORTHO05D003762 3.8e-07 59.3 143 34.3
Hma1.2p1_0078F.1_g040430 Hydrangea macrophylla HOM05D003304 ORTHO05D003762 1.1e-06 57.8 149 32.2
CANSAT78G0081 Cannabis sativa HOM05D003304 ORTHO05D003762 1.9e-06 57.0 156 33.3
Oeu006408.1 Olea europaea HOM05D003304 ORTHO05D003762 3.2e-06 56.2 135 37.8
Oeu053986.1 Olea europaea HOM05D003304 ORTHO05D003762 7.2e-06 55.1 137 36.5
Aqoxy3G03400 Aquilegia oxysepala HOM05D003304 ORTHO05D003762 9.4e-06 54.7 116 37.1


User provided reference genes

Program Settings