Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G017440 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.1e-131 472.2 222 100.0
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.0e-17 92.0 166 34.3
ClCG06G018450 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.7e-16 90.5 75 49.3
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-16 90.5 99 43.4
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.6e-16 88.6 168 33.3
ClCG10G001990 Citrullus lanatus HOM05D007588 ORTHO05D001339 8.7e-16 88.2 64 53.1
MELO3C003063.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.6e-15 85.5 75 50.7
MELO3C023377.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.6e-15 84.7 73 50.7
MELO3C000403.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.3e-14 84.3 64 54.7
MELO3C014073.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.3e-14 84.3 99 42.4
MELO3C000406.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.8e-14 82.4 64 53.1
MELO3C032919.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.1e-14 81.6 108 37.0
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 1.1e-13 81.3 109 38.5
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.4e-13 80.1 64 54.7
Sed0008707 Sechium edule HOM05D007588 ORTHO05D001339 2.4e-13 80.1 87 44.8
Sed0005891 Sechium edule HOM05D007588 ORTHO05D001339 4.0e-13 79.3 68 52.9
Sed0011849 Sechium edule HOM05D007588 ORTHO05D001339 9.0e-13 78.2 77 42.9
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 9.0e-13 78.2 64 53.1
ClCG05G011080 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.0e-12 77.0 64 51.6
MELO3C026771.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.0e-12 77.0 121 36.4
MELO3C035530.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.0e-12 77.0 121 36.4
MELO3C005552.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.4e-12 76.3 63 52.4
MELO3C021089.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.4e-12 76.3 79 43.0
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 5.8e-12 75.5 77 41.6
Sed0005938 Sechium edule HOM05D007588 ORTHO05D001339 7.6e-12 75.1 107 36.4
MELO3C004802.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.3e-11 74.3 99 38.4
MELO3C003179.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.2e-11 73.6 63 47.6
MELO3C004043.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.2e-11 73.6 69 46.4
MELO3C012990.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.9e-11 73.2 64 46.9
MELO3C009067.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.9e-11 72.4 97 39.2
Sed0001869 Sechium edule HOM05D007588 ORTHO05D001339 4.9e-11 72.4 109 36.7
ClCG03G008310 Citrullus lanatus HOM05D007588 ORTHO05D001339 8.4e-11 71.6 84 39.3
MELO3C029797.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.4e-11 71.6 63 44.4
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 8.4e-11 71.6 100 34.0
MELO3C006457.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-10 70.9 73 41.1
MELO3C023616.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.9e-10 70.5 63 49.2
CsaV3_6G033820 Cucumis sativus L. HOM05D007588 ORTHO05D001339 4.2e-10 69.3 64 35.9
ClCG06G009500 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.2e-09 67.8 110 31.8
MELO3C029351.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.1e-09 67.0 51 58.8
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-09 67.0 92 37.0
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 2.7e-09 66.6 191 27.2
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.7e-09 66.6 64 43.8
MELO3C032938.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.7e-09 66.6 62 48.4
Sed0012823 Sechium edule HOM05D007588 ORTHO05D001339 4.6e-09 65.9 75 38.7
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 6.0e-09 65.5 64 43.8
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-08 64.7 91 34.1
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 1.3e-08 64.3 85 36.5
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 1.8e-08 63.9 64 42.2
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 3.0e-08 63.2 91 33.0
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 3.0e-08 63.2 59 40.7
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.9e-08 62.8 50 54.0
ClCG02G006510 Citrullus lanatus HOM05D000003 ORTHO05D000004 6.7e-08 62.0 53 54.7
MELO3C012892.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.7e-08 61.6 51 54.9
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 8.7e-08 61.6 91 33.0
ClCG07G006510 Citrullus lanatus HOM05D009184 ORTHO05D000001 1.1e-07 61.2 64 39.1
ClCG08G006820 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.1e-07 61.2 46 60.9
MELO3C029873.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.1e-07 61.2 50 54.0
ClCG03G010370 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.5e-07 60.8 64 39.1
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-07 60.8 71 35.2
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-07 60.5 71 35.2
MELO3C028681.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.5e-07 60.1 50 46.0
ClCG05G010700 Citrullus lanatus HOM05D009184 ORTHO05D001339 3.3e-07 59.7 64 37.5
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-07 59.7 66 34.8
ClCG06G009830 Citrullus lanatus HOM05D009184 ORTHO05D015610 7.4e-07 58.5 64 35.9
Sed0000206 Sechium edule HOM05D007588 ORTHO05D001339 7.4e-07 58.5 45 55.6
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.3e-06 57.8 64 37.5
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 1.3e-06 57.8 63 38.1
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.6e-06 57.4 64 39.1
MELO3C020247.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.6e-06 57.4 51 51.0
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-06 57.4 79 35.4
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 2.1e-06 57.0 63 36.5
MELO3C026648.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.1e-06 57.0 45 53.3
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-06 56.6 62 35.5
Sed0021777 Sechium edule HOM05D007588 ORTHO05D001339 3.6e-06 56.2 60 41.7
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-06 55.8 115 27.8
CsaV3_1G009110 Cucumis sativus L. HOM05D007588 ORTHO05D001339 6.2e-06 55.5 72 41.7
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 6.2e-06 55.5 75 34.7
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 8.1e-06 55.1 65 32.3
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 8.1e-06 55.1 62 35.5
Sed0016803 Sechium edule HOM05D007588 ORTHO05D001339 8.1e-06 55.1 60 43.3
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 8.1e-06 55.1 52 40.4
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.1e-06 55.1 52 40.4
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.1e-06 55.1 52 40.4
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.1e-06 55.1 52 40.4


User provided reference genes

Program Settings