Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 5.9e-61 237.3 114 100.0
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 9.5e-59 229.9 114 96.5
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 9.5e-59 229.9 114 96.5
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 3.9e-52 208.0 111 89.2
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 3.2e-46 188.3 112 78.6
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 3.5e-45 184.9 111 75.7
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 7.8e-45 183.7 111 75.7
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 1.0e-44 183.3 109 76.1
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 3.0e-44 181.8 110 77.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.0e-44 181.8 108 80.6
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 8.6e-44 180.3 110 77.3
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 1.1e-43 179.9 111 75.7
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.5e-43 178.7 109 75.2
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.5e-43 178.7 109 75.2
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 4.3e-43 177.9 112 73.2
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 9.5e-43 176.8 110 74.5
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 9.5e-43 176.8 108 75.0
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 9.5e-43 176.8 110 73.6
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 9.5e-43 176.8 110 73.6
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.2e-42 176.4 109 71.6
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.6e-42 176.0 110 73.6
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 2.1e-42 175.6 110 72.7
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.1e-42 175.6 111 74.8
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 2.8e-42 175.3 109 75.2
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 4.7e-42 174.5 109 72.5
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 4.7e-42 174.5 110 72.7
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 6.2e-42 174.1 108 73.1
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 8.1e-42 173.7 110 71.8
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 8.1e-42 173.7 111 76.6
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.1e-41 173.3 112 73.2
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.4e-41 172.9 110 70.9
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.8e-41 172.6 111 71.2
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.8e-41 172.6 109 74.3
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.8e-41 172.6 110 73.6
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.3e-41 172.2 108 73.1
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 2.3e-41 172.2 111 72.1
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 3.1e-41 171.8 112 67.0
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.1e-41 171.8 110 71.8
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 4.0e-41 171.4 111 72.1
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 5.2e-41 171.0 109 72.5
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 6.8e-41 170.6 115 69.6
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 6.8e-41 170.6 107 72.0
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 8.9e-41 170.2 109 71.6
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 8.9e-41 170.2 107 72.9
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 8.9e-41 170.2 110 70.9
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.2e-40 169.9 109 74.3
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.2e-40 169.9 109 75.2
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.2e-40 169.9 110 70.9
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.5e-40 169.5 110 70.9
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.5e-40 169.5 111 68.5
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.5e-40 169.5 111 68.5
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.0e-40 169.1 103 78.6
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.6e-40 168.7 109 73.4
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 3.4e-40 168.3 107 75.7
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 3.4e-40 168.3 110 74.5
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 3.4e-40 168.3 110 70.9
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 3.4e-40 168.3 110 70.9
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.4e-40 167.9 111 71.2
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 5.8e-40 167.5 109 72.5
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 9.8e-40 166.8 110 71.8
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.3e-39 166.4 110 69.1
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.3e-39 166.4 110 69.1
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.3e-39 166.4 108 74.1
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 2.2e-39 165.6 110 71.8
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 2.2e-39 165.6 110 72.7
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.2e-39 165.6 110 70.9
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 4.9e-39 164.5 111 72.1
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 8.3e-39 163.7 111 70.3
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 8.3e-39 163.7 110 70.9
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 8.3e-39 163.7 106 70.8
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.1e-38 163.3 111 70.3
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.4e-38 162.9 109 69.7
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.9e-38 162.5 111 66.7
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 2.4e-38 162.2 111 71.2
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 4.6e-37 157.9 108 65.7
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 4.6e-37 157.9 102 67.6
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 6.0e-37 157.5 104 67.3
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 6.0e-37 157.5 104 67.3
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 6.0e-37 157.5 104 67.3
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 7.8e-37 157.1 104 67.3
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.0e-36 156.8 104 67.3
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.0e-36 156.8 104 68.3
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.3e-36 156.4 107 65.4
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 1.3e-36 156.4 112 64.3
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.7e-36 156.0 109 65.1
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 3.0e-36 155.2 104 66.3
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 5.1e-36 154.5 104 66.3
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 5.1e-36 154.5 93 80.6
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 6.6e-36 154.1 104 65.4
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 8.6e-36 153.7 104 65.4
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 8.6e-36 153.7 104 65.4
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.5e-35 152.9 93 78.5
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-35 152.9 104 66.3
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.5e-35 152.9 104 66.3
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.5e-35 152.9 101 71.3
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.5e-35 152.9 101 71.3
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 1.5e-35 152.9 108 64.8
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 2.5e-35 152.1 104 64.4
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 3.3e-35 151.8 108 69.4
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 4.3e-35 151.4 106 70.8
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 7.3e-35 150.6 96 75.0
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.6e-34 149.4 106 61.3
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 2.1e-34 149.1 93 74.2
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.1e-34 149.1 93 74.2
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 2.8e-34 148.7 104 67.3
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 4.7e-34 147.9 116 62.9
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.1e-33 146.7 107 65.4
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 3.4e-32 141.7 99 66.7
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 1.7e-31 139.4 104 60.6
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.2e-31 139.0 111 63.1
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 2.9e-31 138.7 110 59.1
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 8.4e-31 137.1 112 59.8
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.4e-30 136.3 88 69.3
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 7.1e-30 134.0 88 69.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.7e-28 129.4 85 67.1
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.9e-27 125.9 100 57.0
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.9e-27 125.9 87 66.7
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 9.6e-27 123.6 83 68.7
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.2e-26 123.2 83 65.1
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.1e-25 120.2 94 59.6
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.1e-25 118.6 88 65.9
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 8.9e-25 117.1 79 70.9
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 1.2e-24 116.7 95 57.9
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 5.8e-24 114.4 80 63.8
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 7.8e-21 104.0 68 73.5
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.3e-20 103.2 66 72.7
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 8.7e-20 100.5 84 54.8
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 4.3e-19 98.2 91 54.9
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.8e-18 95.5 61 72.1
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.3e-14 80.5 54 72.2
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 1.3e-10 70.1 50 64.0
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.1e-09 67.0 56 58.9
ClCG09G006620 Citrullus lanatus HOM05D032925 ORTHO05D034760 4.9e-07 58.2 85 41.2
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.9e-06 56.2 39 64.1


User provided reference genes

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