Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G017300 Citrullus lanatus HOM05D009824 ORTHO05D010344 1.9e-56 222.2 107 100.0
CsaV3_3G023270 Cucumis sativus L. HOM05D009824 ORTHO05D012089 2.9e-25 118.6 101 63.4
ClCG03G012270 Citrullus lanatus HOM05D009824 ORTHO05D012089 7.6e-18 94.0 72 62.5
TPR.G6486 Trifolium pratense HOM05D009824 ORTHO05D012089 6.0e-15 84.3 84 46.4
TPR.G6428 Trifolium pratense HOM05D009824 ORTHO05D012089 4.9e-09 64.7 71 42.3
Ciclev10018043m.g Citrus clementina HOM05D009824 ORTHO05D012089 1.9e-08 62.8 75 41.3
Sabra13G0115000 Salix brachista HOM05D009824 ORTHO05D012089 4.2e-08 61.6 50 54.0
AT2G32835 Arabidopsis thaliana HOM05D010069 ORTHO05D011961 1.2e-07 60.1 63 44.4
BcaC04g22331 Brassica carinata HOM05D008190 ORTHO05D010344 1.6e-07 59.7 72 44.4
C09p20500 Brassica napus HOM05D008190 ORTHO05D010344 1.6e-07 59.7 72 44.4
BolC9t54955H Brassica oleracea HOM05D008190 ORTHO05D010344 1.6e-07 59.7 72 44.4
CARHR126820 Cardamine hirsuta HOM05D010425 ORTHO05D014400 2.7e-07 58.9 72 37.5
AL4G28390 Arabidopsis lyrata HOM05D010425 ORTHO05D014400 3.5e-07 58.5 72 37.5
Cpa.g.sc183.18 Carica papaya HOM05D009824 ORTHO05D012089 4.6e-07 58.2 71 39.4
Prupe.3G207900 Prunus persica HOM05D009824 ORTHO05D012089 4.6e-07 58.2 71 42.3
AT1G61566 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 6.0e-07 57.8 76 43.4
Cpa.g.sc132.46 Carica papaya HOM05D009824 ORTHO05D012089 6.0e-07 57.8 46 58.7
FAN05G3200 Fragaria x ananassa HOM05D011987 ORTHO05D012913 6.0e-07 57.8 72 44.4
A09p16740 Brassica napus HOM05D008190 ORTHO05D010344 7.9e-07 57.4 72 43.1
A09p16750 Brassica napus HOM05D008190 ORTHO05D010344 7.9e-07 57.4 72 43.1
BraA09t37311Z Brassica rapa HOM05D008190 ORTHO05D010344 7.9e-07 57.4 72 43.1
BraA09t37312Z Brassica rapa HOM05D008190 ORTHO05D010344 7.9e-07 57.4 72 43.1
Potri.019G102400 Populus trichocarpa HOM05D000973 ORTHO05D012089 7.9e-07 57.4 55 49.1
Atru.chr10.1415 Acer truncatum HOM05D009824 ORTHO05D012913 1.0e-06 57.0 75 36.0
BcaC04g22332 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-06 57.0 72 43.1
C09p20480 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-06 57.0 72 43.1
BolC9t54953H Brassica oleracea HOM05D008190 ORTHO05D010344 1.0e-06 57.0 72 43.1
QL03p008520 Quercus lobata HOM05D011987 ORTHO05D012913 1.3e-06 56.6 81 35.8
QL10p003547 Quercus lobata HOM05D011987 ORTHO05D012913 1.3e-06 56.6 81 35.8
AL4G30810 Arabidopsis lyrata HOM05D010425 ORTHO05D014400 1.8e-06 56.2 72 36.1
AT2G32885 Arabidopsis thaliana HOM05D010425 ORTHO05D014400 3.0e-06 55.5 72 36.1
CARHR050840 Cardamine hirsuta HOM05D008190 ORTHO05D010344 3.0e-06 55.5 75 40.0
Manes.13G061750 Manihot esculenta HOM05D009824 ORTHO05D012089 3.0e-06 55.5 90 34.4
A05p42830 Brassica napus HOM05D008965 ORTHO05D011533 5.1e-06 54.7 54 46.3
Nn2g14868 Nelumbo nucifera HOM05D011987 ORTHO05D012913 5.1e-06 54.7 71 39.4
TAR720G0005 Trochodendron aralioides HOM05D003038 ORTHO05D003514 5.1e-06 54.7 88 36.4
AL2G14700 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 6.7e-06 54.3 76 38.2
AL2G15970 Arabidopsis lyrata HOM05D010069 ORTHO05D011961 6.7e-06 54.3 63 39.7
BcaC04g22333 Brassica carinata HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
BcaC04g22334 Brassica carinata HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
BcaC04g22335 Brassica carinata HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
BcaC04g22336 Brassica carinata HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
BcaC04g22337 Brassica carinata HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
BcaC04g22338 Brassica carinata HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
C09p20440 Brassica napus HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
C09p20450 Brassica napus HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
C09p20460 Brassica napus HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
C09p20470 Brassica napus HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
BolC9t54948H Brassica oleracea HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
BolC9t54950H Brassica oleracea HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
BolC9t54951H Brassica oleracea HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
BolC9t54952H Brassica oleracea HOM05D008190 ORTHO05D010344 8.7e-06 53.9 72 41.7
Carub.0002s0714 Capsella rubella HOM05D010069 ORTHO05D011961 8.7e-06 53.9 72 36.1
Carub.0002s0715 Capsella rubella HOM05D010069 ORTHO05D011961 8.7e-06 53.9 72 36.1
Carub.0002s0717 Capsella rubella HOM05D010069 ORTHO05D011961 8.7e-06 53.9 72 36.1


User provided reference genes

Program Settings