Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 2.2e-171 605.5 309 100.0
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 1.9e-98 363.2 196 95.4
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.2e-95 354.0 195 92.8
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 2.8e-89 332.8 196 87.2
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 2.4e-88 329.7 196 85.2
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 1.2e-87 327.4 196 86.2
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.5e-87 327.0 196 84.7
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.0e-87 326.6 196 84.2
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 2.6e-87 326.2 196 84.2
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 3.4e-87 325.9 196 85.7
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 3.4e-87 325.9 196 85.2
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 5.9e-87 325.1 196 84.7
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 1.3e-86 323.9 197 83.2
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.7e-86 323.6 196 84.7
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 2.2e-86 323.2 196 83.7
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 2.2e-86 323.2 196 83.7
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 8.5e-86 321.2 196 83.7
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.9e-85 320.1 196 83.7
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 2.5e-85 319.7 196 84.2
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.2e-85 319.3 196 84.2
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 4.2e-85 318.9 196 83.7
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 9.4e-85 317.8 195 83.1
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 9.4e-85 317.8 196 83.2
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 9.4e-85 317.8 196 83.2
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.2e-84 317.4 195 82.6
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 1.2e-84 317.4 207 77.8
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.1e-84 316.6 197 83.2
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 2.7e-84 316.2 196 82.1
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.7e-84 316.2 196 82.7
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 4.6e-84 315.5 196 82.7
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 6.1e-84 315.1 197 81.7
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 7.9e-84 314.7 196 81.1
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 1.4e-83 313.9 196 82.1
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.8e-83 313.5 200 82.0
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 2.3e-83 313.2 195 81.5
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 3.0e-83 312.8 222 73.0
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 3.9e-83 312.4 196 80.6
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 6.7e-83 311.6 196 83.2
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 6.7e-83 311.6 196 80.1
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 6.7e-83 311.6 196 82.1
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 8.8e-83 311.2 196 79.6
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 2.0e-82 310.1 196 81.6
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.0e-82 310.1 196 81.6
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 3.3e-82 309.3 196 81.6
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 4.3e-82 308.9 224 73.7
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 4.3e-82 308.9 224 73.7
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 7.4e-82 308.1 196 79.6
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 9.7e-82 307.8 195 79.5
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 9.7e-82 307.8 207 77.3
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 9.7e-82 307.8 195 80.0
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.3e-81 307.4 195 80.5
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.3e-81 307.4 195 81.0
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.3e-81 307.4 195 81.0
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.3e-81 307.4 195 81.0
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.7e-81 307.0 195 79.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 2.2e-81 306.6 195 80.5
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 2.2e-81 306.6 182 85.2
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 2.8e-81 306.2 196 80.1
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 3.7e-81 305.8 195 80.0
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.7e-81 305.8 195 78.5
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.7e-81 305.8 195 78.5
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 6.3e-81 305.1 196 80.1
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 6.3e-81 305.1 196 80.1
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 8.2e-81 304.7 217 71.9
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 1.1e-80 304.3 196 80.6
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.4e-80 303.9 196 78.1
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.8e-80 303.5 196 78.1
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 4.1e-80 302.4 204 77.5
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 9.1e-80 301.2 196 78.1
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 9.1e-80 301.2 195 78.5
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.2e-79 300.8 189 81.5
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 7.7e-79 298.1 196 76.5
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.0e-78 297.7 196 77.0
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.7e-78 297.0 195 77.9
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.2e-78 296.6 182 83.0
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.2e-78 296.6 196 77.6
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 5.0e-78 295.4 187 82.4
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 6.5e-78 295.0 222 71.2
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 8.5e-78 294.7 182 83.0
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.1e-77 294.3 182 83.0
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.9e-77 293.5 181 81.8
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 2.5e-77 293.1 221 71.5
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 3.2e-77 292.7 196 80.6
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 3.6e-76 289.3 196 77.0
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.5e-74 283.9 184 76.6
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 5.7e-74 282.0 181 79.6
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 7.4e-74 281.6 196 76.5
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 9.7e-74 281.2 196 79.1
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 3.1e-72 276.2 169 85.2
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 8.5e-70 268.1 196 73.0
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.1e-69 267.7 197 68.5
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.1e-68 263.5 213 66.2
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 6.1e-68 261.9 172 80.2
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 3.0e-67 259.6 196 67.9
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 8.2e-65 251.5 172 75.6
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.4e-64 250.8 196 65.3
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.8e-64 250.4 196 66.3
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.4e-64 250.0 153 86.3
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 1.2e-63 247.7 196 69.9
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.2e-60 237.7 196 68.9
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 2.1e-60 236.9 211 64.5
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.8e-56 223.8 142 83.8
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.7e-55 219.9 194 62.9
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.5e-53 213.4 151 77.5
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 3.2e-53 213.0 130 82.3
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.8e-44 183.3 172 61.0
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.2e-42 177.9 120 78.3
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.4e-42 176.4 112 78.6
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 7.5e-42 175.3 137 67.9
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 8.3e-41 171.8 136 72.8
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.5e-34 151.0 108 75.0
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 7.5e-34 148.7 114 68.4
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 6.2e-28 129.0 194 37.6
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 2.0e-26 124.0 192 35.9
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 2.0e-26 124.0 74 78.4
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 5.4e-24 115.9 195 37.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.7e-22 110.9 87 69.0
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 4.3e-21 106.3 101 60.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 7.3e-21 105.5 101 59.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 2.0e-18 97.4 83 63.9
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 4.3e-13 79.7 68 52.9
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.6e-07 61.2 29 82.8


User provided reference genes

Program Settings