Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 4.9e-154 547.7 273 100.0
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 3.8e-138 495.0 276 89.9
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 4.0e-132 474.9 276 86.6
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.5e-131 473.0 277 87.4
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 1.2e-99 367.1 287 66.2
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.6e-99 366.7 279 65.2
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 7.2e-97 357.8 281 66.5
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 2.7e-96 355.9 282 66.0
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 4.7e-96 355.1 281 65.5
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 1.0e-95 354.0 281 63.7
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 3.0e-95 352.4 281 64.8
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 4.0e-95 352.1 281 63.3
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 8.8e-95 350.9 282 64.5
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 1.2e-94 350.5 282 64.5
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 2.6e-94 349.4 280 64.6
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 3.3e-94 349.0 279 63.8
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 5.7e-94 348.2 282 63.1
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 9.7e-94 347.4 282 61.7
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 9.7e-94 347.4 282 61.7
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 4.8e-93 345.1 282 63.5
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 8.3e-93 344.4 278 64.4
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 1.4e-92 343.6 281 64.1
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 3.1e-92 342.4 277 61.4
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 4.5e-91 338.6 276 63.0
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 1.3e-90 337.0 280 62.5
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.3e-90 337.0 282 60.3
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 2.9e-90 335.9 277 62.5
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 6.5e-90 334.7 281 62.3
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 1.1e-89 334.0 282 63.1
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.1e-89 334.0 280 62.5
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.1e-89 334.0 280 62.5
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 2.7e-88 329.3 273 62.3
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 2.0e-86 323.2 281 58.4
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 7.5e-86 321.2 276 60.9
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 9.8e-86 320.9 282 57.8
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 2.4e-84 316.2 278 61.5
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 5.4e-84 315.1 281 59.8
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 2.7e-83 312.8 282 57.8
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 2.9e-82 309.3 278 56.8
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.8e-82 308.9 277 57.8
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 5.5e-81 305.1 279 57.7
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 7.2e-81 304.7 283 55.5
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 7.2e-81 304.7 279 56.3
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 6.1e-80 301.6 275 56.7
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 6.1e-80 301.6 272 56.6
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 8.0e-80 301.2 284 57.0
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 8.0e-80 301.2 274 57.7
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 1.8e-79 300.1 287 57.1
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 2.3e-79 299.7 270 56.7
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 4.0e-79 298.9 273 56.8
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 1.2e-78 297.4 280 56.8
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 9.8e-78 294.3 282 53.9
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 9.8e-78 294.3 277 56.3
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.8e-78 294.3 277 56.3
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 9.8e-78 294.3 287 55.4
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 4.9e-77 292.0 282 53.9
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 1.4e-76 290.4 282 53.9
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 2.4e-76 289.7 285 53.7
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 3.2e-76 289.3 260 58.8
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 9.2e-76 287.7 288 52.4
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 2.7e-75 286.2 282 56.4
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.0e-74 284.3 285 54.7
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 2.3e-74 283.1 286 53.5
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 2.1e-72 276.6 297 50.2
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 1.0e-71 274.2 279 52.7
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 2.6e-70 269.6 254 56.3
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 8.3e-69 264.6 274 54.0
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 1.1e-68 264.2 288 51.0
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 5.4e-68 261.9 277 49.1
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 2.0e-67 260.0 251 59.4
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 1.0e-66 257.7 238 56.7
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.5e-65 253.8 277 51.6
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 8.9e-63 244.6 233 55.8
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 2.0e-62 243.4 270 49.6
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 2.6e-62 243.0 288 47.6
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 4.4e-62 242.3 276 49.3
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 4.4e-62 242.3 243 54.3
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 5.8e-62 241.9 235 57.4
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.3e-61 240.7 236 56.8
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.1e-59 233.4 277 49.1
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 1.3e-58 230.7 282 45.0
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 2.3e-58 229.9 238 52.9
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 5.6e-57 225.3 254 49.6
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 2.3e-55 219.9 297 44.8
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 3.1e-55 219.5 301 44.5
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.2e-55 218.8 277 46.9
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 3.4e-46 189.5 238 47.1
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 3.8e-45 186.0 194 51.5
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 9.3e-44 181.4 154 59.1
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 9.3e-44 181.4 154 59.1
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.2e-43 181.0 170 55.3
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 2.7e-43 179.9 170 55.3
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 4.6e-43 179.1 236 46.2
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 1.0e-42 177.9 143 60.1
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 6.6e-42 175.3 176 54.0
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 8.7e-42 174.9 204 49.0
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 1.1e-41 174.5 193 48.7
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 2.5e-41 173.3 192 51.0
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 1.3e-40 171.0 196 50.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 3.6e-40 169.5 291 36.4
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 6.2e-40 168.7 158 57.6
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 3.1e-39 166.4 263 41.8
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 5.3e-39 165.6 198 50.5
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 5.3e-39 165.6 293 36.2
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 9.0e-39 164.9 146 53.4
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 1.4e-36 157.5 223 43.5
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 1.2e-35 154.5 155 57.4
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 2.1e-35 153.7 109 69.7
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 1.5e-33 147.5 128 60.2
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 1.5e-33 147.5 180 46.1
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 6.2e-32 142.1 70 90.0
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 3.1e-31 139.8 95 70.5
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.6e-30 136.7 197 44.2
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 1.6e-24 117.5 220 39.5
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 6.9e-15 85.5 78 56.4
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 6.9e-15 85.5 197 35.0
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 1.2e-14 84.7 75 60.0
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.2e-14 84.7 109 50.5
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 2.1e-11 73.9 46 71.7
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 1.8e-10 70.9 92 40.2
SalBow6G0039 Salvia bowleyana HOM05D006517 ORTHO05D007886 1.2e-06 58.2 27 88.9
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 1.2e-06 58.2 76 40.8
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 3.4e-06 56.6 75 38.7
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 4.5e-06 56.2 60 48.3
Sed0009859 Sechium edule HOM05D000088 ORTHO05D003056 4.5e-06 56.2 70 38.6


User provided reference genes

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