Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 1.1e-217 759.6 381 100.0
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.7e-205 719.2 391 91.8
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.4e-202 709.5 391 91.3
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 1.3e-189 666.4 397 85.9
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 5.4e-159 564.7 396 74.5
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 7.1e-159 564.3 396 72.0
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.2e-158 563.5 386 73.8
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 1.7e-157 559.7 397 72.8
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 3.3e-156 555.4 376 74.2
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 7.3e-156 554.3 389 74.0
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.2e-155 553.5 393 72.8
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 2.1e-155 552.7 372 75.0
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 4.7e-155 551.6 396 72.5
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 6.2e-155 551.2 390 74.1
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 8.1e-155 550.8 389 73.3
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 6.9e-154 547.7 336 81.0
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 1.2e-153 547.0 370 75.7
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 4.4e-153 545.0 378 73.5
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 9.9e-153 543.9 394 71.8
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 9.9e-153 543.9 385 71.2
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 2.9e-152 542.3 400 70.2
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 2.9e-152 542.3 393 71.0
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.9e-152 542.3 391 72.1
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.1e-151 540.4 389 71.0
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.9e-151 539.7 385 71.4
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.9e-151 539.7 387 70.5
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 2.4e-151 539.3 398 69.8
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 3.2e-151 538.9 330 78.5
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 3.2e-151 538.9 376 74.5
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.2e-151 538.9 385 70.9
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 4.2e-151 538.5 392 70.4
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 4.2e-151 538.5 388 71.4
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 9.3e-151 537.3 376 71.8
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.2e-150 537.0 383 72.3
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 2.1e-150 536.2 387 70.0
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.7e-150 535.8 391 70.3
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 3.5e-150 535.4 387 71.8
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 3.5e-150 535.4 387 70.8
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 6.0e-150 534.6 398 68.8
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 6.0e-150 534.6 386 70.7
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 7.8e-150 534.3 392 69.9
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 7.8e-150 534.3 398 69.3
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.0e-149 533.9 383 71.8
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 3.0e-149 532.3 388 68.8
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 3.9e-149 531.9 345 75.9
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 5.1e-149 531.6 384 71.9
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.7e-149 530.8 338 78.7
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.1e-148 530.4 403 67.2
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.1e-148 530.4 400 68.8
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.1e-148 530.4 391 70.6
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 1.5e-148 530.0 387 70.3
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 1.5e-148 530.0 387 70.3
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 1.9e-148 529.6 387 69.5
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 1.9e-148 529.6 387 69.5
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 1.9e-148 529.6 338 78.4
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.9e-148 529.6 338 78.4
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.9e-148 529.6 338 78.7
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 2.5e-148 529.3 387 69.3
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 3.3e-148 528.9 393 69.2
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 5.6e-148 528.1 362 72.7
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 7.3e-148 527.7 366 71.9
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 7.3e-148 527.7 387 69.0
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 1.3e-147 526.9 398 69.3
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.6e-147 526.6 387 68.5
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.1e-147 526.2 387 68.5
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.1e-147 526.2 387 70.0
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 4.8e-147 525.0 384 70.1
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 6.2e-147 524.6 332 77.4
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 6.2e-147 524.6 396 67.7
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 6.2e-147 524.6 396 67.7
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 8.1e-147 524.2 384 70.3
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.4e-146 523.5 387 69.0
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.4e-146 522.7 324 79.0
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 2.0e-145 519.6 399 67.4
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.6e-145 519.2 374 70.6
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 3.4e-145 518.8 364 70.9
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 4.5e-145 518.5 387 69.8
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 5.8e-145 518.1 437 62.7
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 9.9e-145 517.3 371 69.8
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 2.9e-144 515.8 383 67.6
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 6.4e-144 514.6 392 66.3
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 1.9e-143 513.1 350 74.0
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.4e-143 512.7 366 71.6
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 7.1e-143 511.1 364 69.2
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 4.6e-142 508.4 357 71.4
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 2.3e-141 506.1 412 63.8
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 1.9e-140 503.1 408 64.0
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 4.8e-139 498.4 329 73.6
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 8.1e-139 497.7 389 66.1
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.8e-138 496.5 420 63.6
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.5e-137 493.4 330 71.8
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 7.6e-137 491.1 299 81.9
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 9.9e-137 490.7 389 65.6
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.3e-136 490.3 364 66.8
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.9e-135 486.5 373 66.2
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 2.3e-133 479.6 368 68.5
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.3e-130 468.4 362 66.3
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.2e-129 467.2 382 64.4
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 3.4e-129 465.7 387 64.3
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 6.5e-128 461.5 335 72.8
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 6.7e-125 451.4 421 59.4
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 5.3e-122 441.8 354 64.4
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 2.6e-121 439.5 349 64.8
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 1.9e-119 433.3 340 63.2
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.9e-117 425.6 323 65.0
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.5e-116 423.7 380 57.6
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.3e-115 420.6 268 77.2
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 2.5e-111 406.4 321 62.6
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 6.7e-109 398.3 270 74.8
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 2.8e-99 366.3 323 60.1
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 6.3e-99 365.2 292 64.0
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 4.2e-79 299.3 295 50.5
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 1.2e-76 291.2 292 51.4
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.5e-76 290.8 307 55.4
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 8.3e-75 285.0 302 48.3
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 5.4e-74 282.3 190 72.1
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 6.8e-69 265.4 181 76.2
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 9.9e-44 181.8 183 55.2
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.6e-41 174.5 113 78.8
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 6.2e-38 162.5 130 60.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.6e-33 146.4 102 70.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 7.9e-25 119.0 134 50.0
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 1.8e-21 107.8 104 56.7
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.5e-20 104.8 160 37.5
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.9e-19 100.5 105 50.5
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 8.7e-16 89.0 59 74.6
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 4.8e-14 83.2 52 67.3


User provided reference genes

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