Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G012120 Citrullus lanatus HOM05D002051 ORTHO05D002041 3.8e-47 191.0 90 100.0
ClCG06G016840 Citrullus lanatus HOM05D002051 ORTHO05D002041 9.3e-09 63.5 41 61.0
Peaxi162Scf00485g00104 Petunia axillaris HOM05D002051 ORTHO05D002041 9.3e-09 63.5 87 33.3
Sed0002468 Sechium edule HOM05D002051 ORTHO05D002041 2.7e-08 62.0 41 61.0
PGSC0003DMG400000909 Solanum tuberosum HOM05D002051 ORTHO05D002041 2.7e-08 62.0 72 36.1
MELO3C017108.2 Cucumis melo HOM05D002051 ORTHO05D002041 3.5e-08 61.6 41 58.5
Eucgr.F04363 Eucalyptus grandis HOM05D002051 ORTHO05D002041 3.5e-08 61.6 72 38.9
MELO3C020723.2 Cucumis melo HOM05D002051 ORTHO05D002041 4.6e-08 61.2 41 58.5
CAN.G127.1 Capsicum annuum HOM05D002051 ORTHO05D002041 7.8e-08 60.5 72 34.7
CsaV3_1G001680 Cucumis sativus L. HOM05D002051 ORTHO05D002041 7.8e-08 60.5 41 56.1
Nn5g28199 Nelumbo nucifera HOM05D002051 ORTHO05D002041 7.8e-08 60.5 41 53.7
Sopen11g007730 Solanum pennellii HOM05D002051 ORTHO05D002041 1.0e-07 60.1 72 34.7
VMungo0647G1598 Vigna mungo HOM05D002051 ORTHO05D002041 1.0e-07 60.1 41 53.7
SalBow6G3139 Salvia bowleyana HOM05D002051 ORTHO05D002041 1.3e-07 59.7 72 33.3
Phvul.008G164800 Phaseolus vulgaris HOM05D002051 ORTHO05D002041 1.7e-07 59.3 41 51.2
Solyc11g012970.2 Solanum lycopersicum HOM05D002051 ORTHO05D002041 1.7e-07 59.3 72 34.7
THA.LOC104817223 Tarenaya hassleriana HOM05D002051 ORTHO05D002041 2.3e-07 58.9 41 51.2
PSO541G5789 Papaver somniferum HOM05D002051 ORTHO05D002041 3.9e-07 58.2 41 48.8
SGA_v2.0_scaffold28G12007 Striga asiatica HOM05D002051 ORTHO05D002041 5.1e-07 57.8 72 33.3
TPR.G27806 Trifolium pratense HOM05D002051 ORTHO05D002041 5.1e-07 57.8 41 53.7
Nitab4.5_0001035g0020 Nicotiana tabacum HOM05D002051 ORTHO05D002041 6.6e-07 57.4 41 51.2
Nitab4.5_0002377g0010 Nicotiana tabacum HOM05D002051 ORTHO05D002041 6.6e-07 57.4 41 51.2
TAR376G0379 Trochodendron aralioides HOM05D002051 ORTHO05D002041 6.6e-07 57.4 41 51.2
Aa31LG6G9230 Aethionema arabicum HOM05D002051 ORTHO05D002041 8.7e-07 57.0 41 46.3
Carub.0001s3534 Capsella rubella HOM05D002051 ORTHO05D002041 8.7e-07 57.0 41 48.8
CARHR036070 Cardamine hirsuta HOM05D002051 ORTHO05D002041 8.7e-07 57.0 41 48.8
Prupe.1G500800 Prunus persica HOM05D002051 ORTHO05D002041 8.7e-07 57.0 41 48.8
Hund16847 Selenicereus undatus HOM05D002051 ORTHO05D002041 8.7e-07 57.0 41 51.2
ClCG07G006430 Citrullus lanatus HOM05D002051 ORTHO05D150489 1.1e-06 56.6 68 47.1
FAN20G0736 Fragaria x ananassa HOM05D002051 ORTHO05D002041 1.1e-06 56.6 41 51.2
FAN24G0773 Fragaria x ananassa HOM05D002051 ORTHO05D002041 1.1e-06 56.6 41 51.2
Lsat_1_v5_gn_8_24621 Lactuca sativa HOM05D002051 ORTHO05D002041 1.1e-06 56.6 41 48.8
Psat2g078800 Pisum sativum HOM05D002051 ORTHO05D002041 1.1e-06 56.6 41 51.2
AL1G52470 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 1.5e-06 56.2 41 46.3
ECA233G3833 Erigeron canadensis HOM05D002051 ORTHO05D002041 1.5e-06 56.2 41 48.8
ECA233G4695 Erigeron canadensis HOM05D002051 ORTHO05D002041 1.5e-06 56.2 41 48.8
Thhalv10011489m.g Eutrema salsugineum HOM05D002051 ORTHO05D002041 1.5e-06 56.2 41 48.8
PSO675G2728 Papaver somniferum HOM05D002051 ORTHO05D002041 1.5e-06 56.2 41 46.3
PGR044G1898 Punica granatum HOM05D002051 ORTHO05D002041 1.5e-06 56.2 41 48.8
Ah.12g059460 Amaranthus hybridus HOM05D002051 ORTHO05D002041 1.9e-06 55.8 41 48.8
AT1G44820 Arabidopsis thaliana HOM05D002051 ORTHO05D002041 1.9e-06 55.8 41 48.8
CANSAT25G0469 Cannabis sativa HOM05D002051 ORTHO05D002041 1.9e-06 55.8 41 51.2
MELO3C004918.2 Cucumis melo HOM05D002051 ORTHO05D002041 1.9e-06 55.8 34 67.6
ECA233G1940 Erigeron canadensis HOM05D002051 ORTHO05D002041 1.9e-06 55.8 41 48.8
FvH4_2g26640 Fragaria vesca HOM05D002051 ORTHO05D002041 1.9e-06 55.8 41 51.2
Lalb_Chr10g0101881 Lupinus albus HOM05D002051 ORTHO05D002041 1.9e-06 55.8 41 48.8
Manes.02G161800 Manihot esculenta HOM05D002051 ORTHO05D002041 1.9e-06 55.8 41 48.8
RcHm_v2.0_Chr6g0295491 Rosa chinensis HOM05D002051 ORTHO05D002041 1.9e-06 55.8 41 48.8
BcaB07g33919 Brassica carinata HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 48.8
BcaC08g42875 Brassica carinata HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 48.8
A10p07320 Brassica napus HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 48.8
C06p00950 Brassica napus HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 48.8
BolC6t35230H Brassica oleracea HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 48.8
BraSC36t46085Z Brassica rapa HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 48.8
CiPaw.05G223600 Carya illinoinensis HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 48.8
CDE04G1787 Ceratophyllum demersum HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 53.7
MELO3C025808.2 Cucumis melo HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 53.7
MBI06_g20721_MAGBIO Magnolia biondii HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 51.2
Sp1g33670 Schrenkiella parvula HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 48.8
Sp1g33680 Schrenkiella parvula HOM05D002051 ORTHO05D002041 2.5e-06 55.5 41 48.8
AT1G44180 Arabidopsis thaliana HOM05D002051 ORTHO05D002041 3.3e-06 55.1 41 46.3
Ca_05220_v3 Cicer arietinum L. HOM05D002051 ORTHO05D002041 3.3e-06 55.1 41 51.2
Ca_05221_v3 Cicer arietinum L. HOM05D002051 ORTHO05D002041 3.3e-06 55.1 41 51.2
Cc10_g10950 Coffea canephora HOM05D002051 ORTHO05D002041 3.3e-06 55.1 41 46.3
Haze_00468 Corylus avellana HOM05D002051 ORTHO05D002041 3.3e-06 55.1 41 48.8
Potri.002G085400 Populus trichocarpa HOM05D002051 ORTHO05D002041 3.3e-06 55.1 41 48.8
Potri.002G085500 Populus trichocarpa HOM05D002051 ORTHO05D002041 3.3e-06 55.1 41 48.8
Sabra02G0066900 Salix brachista HOM05D002051 ORTHO05D002041 3.3e-06 55.1 41 48.8
AL1G52220 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 4.3e-06 54.7 41 46.3
Cfa015997 Carpinus fangiana HOM05D002051 ORTHO05D002041 4.3e-06 54.7 41 48.8
FAN27G1239 Fragaria x ananassa HOM05D002051 ORTHO05D002041 4.3e-06 54.7 41 51.2
Gohir.A01G188200 Gossypium hirsutum HOM05D002051 ORTHO05D002041 4.3e-06 54.7 41 46.3
Gohir.D01G181400 Gossypium hirsutum HOM05D002051 ORTHO05D002041 4.3e-06 54.7 41 46.3
Gorai.002G221000 Gossypium raimondii HOM05D002051 ORTHO05D002041 4.3e-06 54.7 41 46.3
COL.COLO4_12209 Corchorus olitorius HOM05D002051 ORTHO05D002041 5.6e-06 54.3 41 46.3
Cpa.g.sc36.43 Carica papaya HOM05D002051 ORTHO05D002041 7.3e-06 53.9 41 48.8
MD15G1352300 Malus domestica HOM05D002051 ORTHO05D002041 9.6e-06 53.5 41 46.3
Medtr5g058430 Medicago truncatula HOM05D002051 ORTHO05D002041 9.6e-06 53.5 41 48.8
QL09p035596 Quercus lobata HOM05D002051 ORTHO05D002041 9.6e-06 53.5 41 46.3
Thecc.08G122400 Theobroma cacao HOM05D002051 ORTHO05D002041 9.6e-06 53.5 41 46.3


User provided reference genes

Program Settings