Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G011750 Citrullus lanatus HOM05D005625 ORTHO05D007564 0.0e+00 1253.0 617 100.0
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 9.6e-81 305.4 160 95.6
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 2.8e-80 303.9 160 95.6
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 2.5e-73 280.8 159 86.8
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 2.5e-60 237.7 160 71.9
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 2.7e-59 234.2 160 71.9
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 4.6e-59 233.4 184 62.5
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 7.9e-59 232.6 160 70.6
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 1.3e-58 231.9 161 69.6
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 1.8e-58 231.5 160 70.6
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 8.7e-58 229.2 151 73.5
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 1.1e-57 228.8 160 68.8
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 1.1e-57 228.8 160 68.8
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 1.5e-57 228.4 150 72.7
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 1.6e-56 224.9 160 70.6
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 4.8e-56 223.4 191 60.2
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 4.8e-56 223.4 151 71.5
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 8.2e-56 222.6 153 69.9
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 2.4e-55 221.1 150 70.7
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 2.4e-55 221.1 161 65.8
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 3.1e-55 220.7 160 69.4
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 4.1e-55 220.3 157 70.1
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 5.3e-55 219.9 160 68.1
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 1.2e-54 218.8 153 69.3
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 1.5e-54 218.4 157 68.2
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 2.6e-54 217.6 160 68.1
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 2.6e-54 217.6 152 69.1
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 4.5e-54 216.9 160 67.5
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 4.5e-54 216.9 151 70.9
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 5.9e-54 216.5 160 65.6
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 5.9e-54 216.5 152 68.4
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 7.7e-54 216.1 151 70.2
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 7.7e-54 216.1 157 66.2
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 1.0e-53 215.7 163 62.0
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 1.3e-53 215.3 151 66.9
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 1.7e-53 214.9 151 69.5
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 2.2e-53 214.5 151 69.5
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 2.9e-53 214.2 160 68.1
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 3.8e-53 213.8 160 65.0
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 5.0e-53 213.4 151 68.9
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 8.5e-53 212.6 220 51.8
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 1.4e-52 211.8 151 68.9
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 1.4e-52 211.8 150 66.7
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 1.4e-52 211.8 150 66.0
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 1.9e-52 211.5 151 68.9
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 1.9e-52 211.5 151 68.9
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 1.9e-52 211.5 150 65.3
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 2.5e-52 211.1 151 68.9
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 2.5e-52 211.1 150 66.7
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 5.5e-52 209.9 150 66.0
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 7.2e-52 209.5 151 67.5
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 9.4e-52 209.1 153 65.4
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 1.2e-51 208.8 150 65.3
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 1.2e-51 208.8 152 66.4
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 1.2e-51 208.8 152 67.1
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 1.6e-51 208.4 151 68.9
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 2.1e-51 208.0 150 65.3
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 2.1e-51 208.0 153 67.3
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 2.7e-51 207.6 152 64.5
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 4.6e-51 206.8 159 64.2
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 4.6e-51 206.8 152 64.5
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 4.6e-51 206.8 151 66.2
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 4.6e-51 206.8 166 60.8
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 7.9e-51 206.1 149 67.8
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 7.9e-51 206.1 150 64.7
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 1.4e-50 205.3 157 64.3
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 1.4e-50 205.3 153 65.4
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 1.4e-50 205.3 152 63.2
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 1.8e-50 204.9 150 63.3
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 3.0e-50 204.1 153 66.0
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 3.9e-50 203.8 150 62.7
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 3.9e-50 203.8 160 61.9
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 5.1e-50 203.4 161 64.0
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 5.1e-50 203.4 160 63.1
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 8.8e-50 202.6 165 61.8
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 1.1e-49 202.2 154 63.0
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 1.5e-49 201.8 150 62.0
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 2.5e-49 201.1 154 63.6
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 3.3e-49 200.7 160 61.2
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 4.3e-49 200.3 157 63.1
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 7.4e-49 199.5 150 61.3
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 9.7e-49 199.1 153 64.7
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 1.7e-48 198.4 161 62.1
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 4.8e-48 196.8 153 58.8
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 4.8e-48 196.8 161 61.5
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 4.8e-48 196.8 161 61.5
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 6.3e-48 196.4 152 62.5
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 1.1e-47 195.7 168 56.5
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 1.1e-47 195.7 151 61.6
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 2.4e-47 194.5 161 61.5
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 5.0e-45 186.8 171 55.0
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 1.1e-44 185.7 152 61.2
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 1.4e-44 185.3 150 60.0
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 1.2e-43 182.2 171 53.8
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 2.7e-43 181.0 152 60.5
Os05g0105300 Oryza sativa ssp. japonica HOM05D005625 ORTHO05D007564 4.5e-38 163.7 152 54.6
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 2.3e-34 151.4 150 47.3
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 2.8e-32 144.4 154 46.1
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 1.1e-31 142.5 95 68.4
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 1.7e-29 135.2 153 42.5
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 4.2e-28 130.6 156 42.9
BcaB04g17633 Brassica carinata HOM05D005625 ORTHO05D007564 1.6e-27 128.6 101 64.4
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 2.3e-26 124.8 160 41.9
Cre02.g095113 Chlamydomonas reinhardtii HOM05D005625 ORTHO05D007564 1.7e-24 118.6 155 40.0
ClCG06G009490 Citrullus lanatus HOM05D018160 ORTHO05D001339 4.2e-20 104.0 194 35.1
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 3.0e-18 97.8 154 37.0
ClCG07G006500 Citrullus lanatus HOM05D005236 ORTHO05D006557 1.2e-14 85.9 68 57.4
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 7.7e-14 83.2 68 66.2
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.7e-13 82.0 69 53.6
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 2.9e-13 81.3 71 52.1
ClCG07G006510 Citrullus lanatus HOM05D009184 ORTHO05D000001 2.9e-13 81.3 69 50.7
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 5.0e-13 80.5 350 22.0
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 6.6e-13 80.1 69 52.2
ClCG06G009500 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.1e-12 79.3 69 52.2
ClCG03G009620 Citrullus lanatus HOM05D018160 ORTHO05D001339 2.5e-12 78.2 194 30.4
Glyma.15G127633 Glycine max HOM05D005625 ORTHO05D007564 2.5e-12 78.2 117 41.0
ClCG10G007440 Citrullus lanatus HOM05D000003 ORTHO05D000004 7.3e-12 76.6 70 47.1
ClCG01G016460 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.6e-11 75.5 70 45.7
ClCG06G009830 Citrullus lanatus HOM05D009184 ORTHO05D015610 1.6e-11 75.5 70 44.3
ClCG03G010370 Citrullus lanatus HOM05D009184 ORTHO05D001339 2.1e-11 75.1 69 46.4
Lj2C818T1 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-11 74.7 131 35.1
ClCG02G011570 Citrullus lanatus HOM05D018160 ORTHO05D020462 3.6e-11 74.3 95 34.7
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 1.0e-10 72.8 57 59.6
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.4e-10 72.4 69 49.3
PRCOL_00002543 Prasinoderma coloniale HOM05D005625 ORTHO05D007564 1.4e-10 72.4 163 31.3
ClCG05G010700 Citrullus lanatus HOM05D009184 ORTHO05D001339 2.3e-10 71.6 71 46.5
ClCG04G003160 Citrullus lanatus HOM05D002427 ORTHO05D002818 8.9e-10 69.7 65 44.6
ClCG04G001010 Citrullus lanatus HOM05D009184 ORTHO05D015610 1.2e-09 69.3 86 39.5
ClCG08G003980 Citrullus lanatus HOM05D005970 ORTHO05D007146 5.7e-09 67.0 69 47.8
Lju110A3T19 Lonicera japonica HOM05D002180 ORTHO05D001339 9.8e-09 66.2 115 33.9
Lj1A438T30 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-08 65.9 68 44.1
C02p28970 Brassica napus HOM05D005625 ORTHO05D022022 1.7e-08 65.5 56 62.5
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-08 65.1 95 37.9
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-08 64.3 76 40.8
BolC2t08946H Brassica oleracea HOM05D005625 ORTHO05D022022 4.9e-08 63.9 55 61.8
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 6.4e-08 63.5 149 31.5
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 8.3e-08 63.2 97 36.1
ClCG06G018450 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.4e-07 62.4 65 41.5
Lj2C1001T2 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-07 61.6 76 38.2
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-07 61.6 76 38.2
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-07 61.6 76 38.2
Lju1819C2G19 Lonicera japonica HOM05D001942 ORTHO05D001996 2.4e-07 61.6 76 38.2
TPR.G26547 Trifolium pratense HOM05D005625 ORTHO05D022022 2.4e-07 61.6 55 52.7
Lj1C1063T3 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-07 61.2 67 41.8
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-07 61.2 76 38.2
Lj4C817G2 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-07 61.2 76 38.2
Lj6A393T51 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-07 61.2 66 43.9
Lju41A59G27 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-07 61.2 67 41.8
Lj2C8G2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-07 60.8 67 41.8
Lj3C270T6 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-07 60.8 67 44.8
A02p17310 Brassica napus HOM05D005625 ORTHO05D022022 9.2e-07 59.7 55 58.2
BraA02t06779Z Brassica rapa HOM05D005625 ORTHO05D022022 9.2e-07 59.7 55 58.2
Lj5P747T21 Lonicera japonica HOM05D002180 ORTHO05D001339 9.2e-07 59.7 68 39.7
Lj9C248G5 Lonicera japonica HOM05D002180 ORTHO05D001339 9.2e-07 59.7 67 40.3
Lj2C42T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 59.3 67 44.8
Lj3A585T50 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 59.3 67 44.8
Lj3C991T5 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 59.3 76 36.8
Lj8A607T65 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 59.3 67 44.8
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-06 58.9 88 35.2
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-06 58.5 64 42.2
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 2.0e-06 58.5 74 36.5
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-06 58.5 64 40.6
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-06 58.2 80 33.8
Lj9P310T15 Lonicera japonica HOM05D002180 ORTHO05D001339 3.5e-06 57.8 64 42.2
Lj5C600G1 Lonicera japonica HOM05D002180 ORTHO05D003085 4.6e-06 57.4 67 44.8
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 5.9e-06 57.0 96 31.2
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 5.9e-06 57.0 76 35.5
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 5.9e-06 57.0 96 31.2
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-06 56.6 96 31.2
Lj5C665G8 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-06 56.6 80 33.8
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-06 56.6 76 35.5
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-06 56.6 76 35.5
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-06 56.6 96 31.2
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-06 56.6 80 36.2


User provided reference genes

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