Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 2.6e-192 675.2 348 100.0
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 5.4e-174 614.4 339 94.4
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 2.5e-171 605.5 348 90.8
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 4.0e-169 598.2 348 89.1
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 6.9e-169 597.4 352 86.9
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 8.4e-167 590.5 349 86.8
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 1.1e-166 590.1 347 87.9
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 1.4e-166 589.7 347 87.9
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 2.1e-165 585.9 347 87.0
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 3.5e-165 585.1 348 87.4
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 7.9e-165 583.9 353 85.3
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 1.3e-164 583.2 332 89.8
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 1.8e-164 582.8 347 86.2
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 2.3e-164 582.4 347 86.2
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 2.3e-164 582.4 347 86.2
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 3.0e-164 582.0 358 84.1
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 3.9e-164 581.6 347 87.0
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 5.1e-164 581.3 347 85.9
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 6.7e-164 580.9 347 87.0
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 1.5e-163 579.7 359 83.8
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 1.9e-163 579.3 357 84.6
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.5e-163 578.9 349 85.4
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 3.3e-163 578.6 347 87.0
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 4.3e-163 578.2 351 84.6
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 9.6e-163 577.0 349 85.1
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 1.6e-162 576.2 347 86.7
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 2.1e-162 575.9 346 86.4
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 2.8e-162 575.5 347 86.2
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 2.8e-162 575.5 347 85.3
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 3.7e-162 575.1 347 85.9
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 4.8e-162 574.7 353 83.9
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 4.8e-162 574.7 347 85.3
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 4.8e-162 574.7 347 86.2
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 6.2e-162 574.3 346 86.4
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 6.2e-162 574.3 346 86.4
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 6.2e-162 574.3 346 86.4
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 1.1e-161 573.5 347 85.6
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 1.1e-161 573.5 348 85.9
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 1.1e-161 573.5 349 84.8
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 1.1e-161 573.5 347 85.6
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.4e-161 573.2 349 85.1
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 1.4e-161 573.2 347 85.3
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 1.4e-161 573.2 347 85.3
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 1.8e-161 572.8 351 83.8
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 2.4e-161 572.4 348 85.3
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.1e-161 572.0 350 85.1
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 3.1e-161 572.0 347 85.9
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 5.3e-161 571.2 351 83.8
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 6.9e-161 570.9 357 82.6
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 6.9e-161 570.9 347 85.0
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 1.2e-160 570.1 351 83.8
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 1.2e-160 570.1 347 85.3
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 1.3e-159 566.6 347 84.1
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 1.3e-159 566.6 347 84.1
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 1.7e-159 566.2 347 83.9
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 2.2e-159 565.8 353 82.2
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 2.2e-159 565.8 345 84.9
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 3.8e-159 565.1 348 84.5
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 5.0e-159 564.7 347 83.9
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 5.0e-159 564.7 347 83.3
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 1.1e-158 563.5 347 83.9
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 1.9e-158 562.8 343 85.7
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 2.5e-158 562.4 347 83.9
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 3.2e-158 562.0 358 81.6
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 5.5e-158 561.2 348 83.9
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 1.2e-157 560.1 345 83.5
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 2.1e-157 559.3 347 83.3
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 6.1e-157 557.8 347 83.6
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 1.0e-156 557.0 347 82.7
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 3.9e-156 555.1 347 82.4
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 7.4e-155 550.8 347 81.6
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 1.3e-154 550.1 342 83.0
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 7.7e-152 540.8 349 79.9
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 2.9e-151 538.9 348 81.9
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 2.5e-150 535.8 343 84.0
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 7.2e-150 534.3 343 83.4
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 7.2e-150 534.3 347 79.3
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 3.6e-149 531.9 347 80.7
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 3.3e-147 525.4 363 78.2
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 9.7e-147 523.9 359 77.4
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 1.2e-144 516.9 321 84.4
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 1.5e-144 516.5 356 77.8
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 2.9e-143 512.3 310 84.5
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 1.1e-142 510.4 348 79.0
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 2.3e-140 502.7 371 73.6
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 3.0e-140 502.3 305 86.2
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 1.1e-134 483.8 439 63.6
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 1.6e-133 479.9 299 84.3
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 1.5e-131 473.4 344 68.0
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 2.2e-130 469.5 360 65.8
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 9.4e-126 454.1 275 85.8
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 2.1e-125 453.0 305 74.8
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 6.1e-125 451.4 274 84.3
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 8.0e-125 451.1 333 69.1
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 6.3e-122 441.4 322 71.4
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 1.6e-120 436.8 274 81.8
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 3.6e-117 425.6 258 86.0
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 2.4e-113 412.9 249 85.9
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 4.1e-113 412.1 334 65.9
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.5e-107 393.7 246 82.9
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 6.4e-106 388.3 279 75.6
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 1.0e-103 380.9 294 65.3
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 1.3e-95 354.0 219 82.2
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 3.9e-95 352.4 266 70.3
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 1.3e-87 327.4 266 69.9
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 2.4e-81 306.6 332 47.6
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 3.4e-75 286.2 154 93.5
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 3.9e-63 246.1 165 77.0
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 6.6e-63 245.4 134 89.6
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 6.2e-61 238.8 164 78.0
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 4.0e-60 236.1 283 52.7
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 6.4e-58 228.8 130 88.5
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 4.6e-40 169.5 123 73.2
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 3.4e-35 153.3 121 70.2
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 5.9e-35 152.5 123 67.5
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 4.7e-24 116.3 130 52.3
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 2.7e-16 90.5 99 53.5
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 2.0e-14 84.3 77 57.1
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 2.5e-09 67.4 142 35.2


User provided reference genes

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