Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G009910 Citrullus lanatus HOM05D004326 ORTHO05D004570 2.0e-34 148.7 81 100.0
MELO3C008521.2 Cucumis melo HOM05D004326 ORTHO05D004570 6.6e-14 80.5 51 80.4
Atru.chr11.1355 Acer truncatum HOM05D004326 ORTHO05D004570 7.3e-13 77.0 55 74.5
TWI31G0110 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 1.6e-12 75.9 50 74.0
Eucgr.G02348 Eucalyptus grandis HOM05D004326 ORTHO05D004570 4.7e-12 74.3 55 69.1
Lalb_Chr17g0341881 Lupinus albus HOM05D004326 ORTHO05D004570 8.1e-12 73.6 50 70.0
Oeu058414.1 Olea europaea HOM05D004326 ORTHO05D004570 1.1e-11 73.2 50 74.0
Gohir.D12G173600 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.8e-11 72.4 50 76.0
Gorai.008G186200 Gossypium raimondii HOM05D004326 ORTHO05D004570 1.8e-11 72.4 50 76.0
Gohir.A12G170400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 2.3e-11 72.0 50 74.0
Gohir.A13G053100 Gossypium hirsutum HOM05D004326 ORTHO05D004570 2.3e-11 72.0 39 92.3
Gohir.D13G069701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 3.1e-11 71.6 56 71.4
TWI79G1601 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 3.1e-11 71.6 50 74.0
Lalb_Chr10g0099751 Lupinus albus HOM05D004326 ORTHO05D004570 4.0e-11 71.2 50 70.0
PGR102G0365 Punica granatum HOM05D004326 ORTHO05D004570 4.0e-11 71.2 50 74.0
CiPaw.15G003600 Carya illinoinensis HOM05D004326 ORTHO05D004570 6.8e-11 70.5 39 89.7
Prupe.1G305400 Prunus persica HOM05D004326 ORTHO05D004570 8.9e-11 70.1 50 70.0
CANSAT64G1998 Cannabis sativa HOM05D004326 ORTHO05D004570 1.2e-10 69.7 50 72.0
MD13G1046500 Malus domestica HOM05D004326 ORTHO05D004570 1.2e-10 69.7 51 70.6
MD16G1048200 Malus domestica HOM05D004326 ORTHO05D004570 1.2e-10 69.7 51 70.6
PSO063G2411 Papaver somniferum HOM05D004326 ORTHO05D004570 1.5e-10 69.3 50 70.0
PSO782G5714 Papaver somniferum HOM05D004326 ORTHO05D004570 1.5e-10 69.3 50 70.0
CAN.G184.91 Capsicum annuum HOM05D004326 ORTHO05D004570 2.6e-10 68.6 39 87.2
Duzib251G0285 Durio zibethinus HOM05D004326 ORTHO05D004570 2.6e-10 68.6 39 87.2
Glyma.01G088000 Glycine max HOM05D004326 ORTHO05D004570 2.6e-10 68.6 39 84.6
Glyma.02G100100 Glycine max HOM05D004326 ORTHO05D004570 2.6e-10 68.6 39 84.6
THA.LOC104805244 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.6e-10 68.6 39 87.2
THA.LOC104825713 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.6e-10 68.6 39 87.2
Thecc.02G361000 Theobroma cacao HOM05D004326 ORTHO05D004570 2.6e-10 68.6 39 87.2
PGR119G2456 Punica granatum HOM05D004326 ORTHO05D004570 3.4e-10 68.2 39 87.2
CARHR013620 Cardamine hirsuta HOM05D004326 ORTHO05D004570 7.5e-10 67.0 50 70.0
Duzib268G0802 Durio zibethinus HOM05D004326 ORTHO05D004570 7.5e-10 67.0 39 84.6
Glyma.20G185900 Glycine max HOM05D004326 ORTHO05D004570 7.5e-10 67.0 39 84.6
Phvul.007G102250 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 7.5e-10 67.0 39 84.6
Carub.0001s1297 Capsella rubella HOM05D004326 ORTHO05D004570 1.7e-09 65.9 50 68.0
Glyma.10G204600 Glycine max HOM05D004326 ORTHO05D004570 2.2e-09 65.5 39 82.1
Lalb_Chr02g0151761 Lupinus albus HOM05D004326 ORTHO05D004570 2.9e-09 65.1 38 78.9
Lalb_Chr06g0170221 Lupinus albus HOM05D004326 ORTHO05D004570 2.9e-09 65.1 39 79.5
THA.LOC109116167 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.9e-09 65.1 39 82.1
AL1G24940 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 6.4e-09 63.9 39 79.5
AT1G13245 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 6.4e-09 63.9 39 79.5
AT3G25717 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 6.4e-09 63.9 38 81.6
A09p24960 Brassica napus HOM05D004326 ORTHO05D004570 6.4e-09 63.9 38 81.6
BraA09t38084Z Brassica rapa HOM05D004326 ORTHO05D004570 6.4e-09 63.9 38 81.6
Carub.0005s0354 Capsella rubella HOM05D004326 ORTHO05D004570 6.4e-09 63.9 38 81.6
Manes.14G097600 Manihot esculenta HOM05D004326 ORTHO05D004570 6.4e-09 63.9 39 79.5
AL2G27790 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 8.3e-09 63.5 39 79.5
AT1G68825 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 8.3e-09 63.5 39 79.5
C06p37300 Brassica napus HOM05D004326 ORTHO05D004570 8.3e-09 63.5 39 79.5
Potri.008G116700 Populus trichocarpa HOM05D004326 ORTHO05D004570 8.3e-09 63.5 39 76.9
A06p08510 Brassica napus HOM05D004326 ORTHO05D004570 1.1e-08 63.2 50 66.0
C05p10110 Brassica napus HOM05D004326 ORTHO05D004570 1.1e-08 63.2 50 66.0
Potri.010G129600 Populus trichocarpa HOM05D004326 ORTHO05D004570 1.1e-08 63.2 39 76.9
A08p32390 Brassica napus HOM05D004326 ORTHO05D004570 1.9e-08 62.4 39 79.5
BolC5t29757H Brassica oleracea HOM05D004326 ORTHO05D004570 1.9e-08 62.4 39 79.5
BraA06t24046Z Brassica rapa HOM05D004326 ORTHO05D004570 1.9e-08 62.4 39 79.5
BraA08t35162Z Brassica rapa HOM05D004326 ORTHO05D004570 1.9e-08 62.4 39 79.5
Carub.0002s1541 Capsella rubella HOM05D004326 ORTHO05D004570 1.9e-08 62.4 39 76.9
Sed0016204 Sechium edule HOM05D004326 ORTHO05D004570 2.4e-08 62.0 34 82.4
A06p42560 Brassica napus HOM05D004326 ORTHO05D004570 3.2e-08 61.6 38 76.3
BolC8t49226H Brassica oleracea HOM05D004326 ORTHO05D004570 3.2e-08 61.6 39 79.5
BraA06t27171Z Brassica rapa HOM05D004326 ORTHO05D004570 3.2e-08 61.6 38 76.3
Manes.06G072200 Manihot esculenta HOM05D004326 ORTHO05D004570 3.2e-08 61.6 39 74.4
PSO478G3685 Papaver somniferum HOM05D004326 ORTHO05D004570 3.2e-08 61.6 39 76.9
Manes.01G107900 Manihot esculenta HOM05D004326 ORTHO05D004570 4.1e-08 61.2 39 64.1
THA.LOC109117025 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 4.1e-08 61.2 39 74.4
Migut.K01265 Erythranthe guttata HOM05D004326 ORTHO05D004570 5.4e-08 60.8 40 82.5
C08p16040 Brassica napus HOM05D004326 ORTHO05D004570 9.2e-08 60.1 39 76.9
PSO017G5195 Papaver somniferum HOM05D004326 ORTHO05D004570 9.2e-08 60.1 38 73.7
Duzib084G0446 Durio zibethinus HOM05D004326 ORTHO05D004570 1.2e-07 59.7 40 70.0
Glyma.10G129200 Glycine max HOM05D004326 ORTHO05D004570 1.2e-07 59.7 39 76.9
Medtr1g093650 Medicago truncatula HOM05D004326 ORTHO05D004570 1.2e-07 59.7 39 76.9
Potri.004G102950 Populus trichocarpa HOM05D004326 ORTHO05D004570 1.2e-07 59.7 50 58.0
Migut.L01097 Erythranthe guttata HOM05D004326 ORTHO05D004570 2.7e-07 58.5 39 69.2
Potri.017G112100 Populus trichocarpa HOM05D004326 ORTHO05D004570 2.7e-07 58.5 50 56.0
PSO063G2252 Papaver somniferum HOM05D004326 ORTHO05D004570 3.5e-07 58.2 31 83.9
PGSC0003DMG400007475 Solanum tuberosum HOM05D004326 ORTHO05D004570 3.5e-07 58.2 31 83.9
TWI12G0968 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 6.0e-07 57.4 39 66.7
TWI56G0546 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 6.0e-07 57.4 39 66.7
PGR042G3431 Punica granatum HOM05D004326 ORTHO05D004570 7.8e-07 57.0 39 64.1
Thecc.04G138400 Theobroma cacao HOM05D004326 ORTHO05D004570 7.8e-07 57.0 39 66.7
BolC7t43991H Brassica oleracea HOM05D004326 ORTHO05D004570 1.0e-06 56.6 38 71.1
Duzib084G0016 Durio zibethinus HOM05D004326 ORTHO05D004570 1.0e-06 56.6 40 67.5
CiPaw.03G059200 Carya illinoinensis HOM05D004326 ORTHO05D004570 1.7e-06 55.8 39 66.7
Manes.02G066501 Manihot esculenta HOM05D004326 ORTHO05D004570 1.7e-06 55.8 39 61.5
CANSAT64G0444 Cannabis sativa HOM05D004326 ORTHO05D004570 2.3e-06 55.5 39 64.1
Migut.K00857 Erythranthe guttata HOM05D004326 ORTHO05D004570 2.3e-06 55.5 39 69.2
Gohir.A09G046900 Gossypium hirsutum HOM05D004326 ORTHO05D004570 2.3e-06 55.5 39 61.5
Gohir.D09G047400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 2.3e-06 55.5 39 61.5
Gorai.006G062700 Gossypium raimondii HOM05D004326 ORTHO05D004570 2.3e-06 55.5 39 61.5
MD09G1083800 Malus domestica HOM05D004326 ORTHO05D004570 2.3e-06 55.5 39 56.4
PGR083G2212 Punica granatum HOM05D004326 ORTHO05D004570 3.0e-06 55.1 39 66.7
Duzib138G0964 Durio zibethinus HOM05D004326 ORTHO05D004570 3.9e-06 54.7 39 64.1
Glyma.08G256500 Glycine max HOM05D004326 ORTHO05D004570 3.9e-06 54.7 39 64.1
Gohir.A07G168701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 3.9e-06 54.7 39 64.1
Gohir.D07G179500 Gossypium hirsutum HOM05D004326 ORTHO05D004570 3.9e-06 54.7 39 64.1
Gorai.001G200500 Gossypium raimondii HOM05D004326 ORTHO05D004570 3.9e-06 54.7 39 64.1
Lalb_Chr17g0336511 Lupinus albus HOM05D004326 ORTHO05D004570 3.9e-06 54.7 39 61.5
MBI18_g23947_MAGBIO Magnolia biondii HOM05D008503 ORTHO05D010842 3.9e-06 54.7 33 63.6
Phvul.008G020301 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 3.9e-06 54.7 39 64.1
Sed0007261 Sechium edule HOM05D004326 ORTHO05D004570 3.9e-06 54.7 39 61.5
CANSAT56G2970 Cannabis sativa HOM05D001415 ORTHO05D001075 5.1e-06 54.3 42 57.1
CiPaw.15G127400 Carya illinoinensis HOM05D004326 ORTHO05D004570 6.6e-06 53.9 39 59.0
FvH4_6g45391 Fragaria vesca HOM05D004326 ORTHO05D004570 6.6e-06 53.9 31 71.0
FAN14G2544 Fragaria x ananassa HOM05D004326 ORTHO05D004570 6.6e-06 53.9 31 71.0
FAN14G3188 Fragaria x ananassa HOM05D004326 ORTHO05D004570 6.6e-06 53.9 31 71.0
Prupe.3G240100 Prunus persica HOM05D004326 ORTHO05D004570 6.6e-06 53.9 39 61.5
CAN.G93.32 Capsicum annuum HOM05D004326 ORTHO05D004570 8.6e-06 53.5 52 51.9
Glyma.18G280800 Glycine max HOM05D004326 ORTHO05D004570 8.6e-06 53.5 39 64.1
Manes.01G020350 Manihot esculenta HOM05D004326 ORTHO05D004570 8.6e-06 53.5 39 64.1
Solyc02g065570.1 Solanum lycopersicum HOM05D004326 ORTHO05D004570 8.6e-06 53.5 39 64.1


User provided reference genes

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