Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.9e-116 422.5 222 100.0
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 1.2e-94 350.1 223 78.5
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 5.5e-87 324.7 235 72.8
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 8.2e-83 310.8 198 78.3
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 7.3e-39 164.9 226 46.0
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.2e-38 164.1 227 41.0
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 4.7e-38 162.2 212 44.8
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 1.1e-37 161.0 222 44.6
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.4e-37 160.6 207 45.4
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 3.1e-37 159.5 214 43.9
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.5e-36 157.1 219 44.7
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 2.0e-36 156.8 225 41.3
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.0e-36 156.8 225 42.7
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 3.4e-36 156.0 213 44.1
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 7.5e-36 154.8 214 43.5
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.3e-35 154.1 225 42.2
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.2e-35 153.3 225 42.2
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 6.4e-35 151.8 225 42.2
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 8.3e-35 151.4 217 43.3
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 1.4e-34 150.6 214 43.0
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 4.1e-34 149.1 236 42.4
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 5.4e-34 148.7 226 42.9
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 2.1e-33 146.7 223 42.6
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.7e-33 146.4 226 45.6
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 3.5e-33 146.0 210 40.5
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 3.5e-33 146.0 210 40.5
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 3.5e-33 146.0 215 43.3
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 4.6e-33 145.6 226 38.9
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 7.8e-33 144.8 209 42.1
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 7.8e-33 144.8 223 40.8
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 7.8e-33 144.8 215 44.2
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 3.0e-32 142.9 220 40.9
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.9e-31 140.2 209 39.7
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 5.6e-31 138.7 255 35.7
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 1.2e-30 137.5 213 39.4
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.2e-30 137.5 240 35.8
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.1e-30 136.7 215 39.5
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.4e-29 134.0 242 40.9
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.4e-29 134.0 242 39.7
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.4e-29 134.0 214 38.3
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.8e-29 133.7 218 41.3
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 6.8e-29 131.7 233 45.9
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 8.9e-29 131.3 241 39.4
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 8.9e-29 131.3 190 41.6
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 2.0e-28 130.2 240 40.4
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 4.4e-28 129.0 215 40.0
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.8e-28 128.6 241 37.3
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 9.9e-28 127.9 219 40.6
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 6.4e-27 125.2 236 41.9
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 8.4e-27 124.8 223 37.7
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.1e-26 124.4 240 35.8
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 4.1e-26 122.5 204 41.2
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.6e-25 120.6 229 38.4
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.6e-25 120.6 207 37.7
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 3.5e-25 119.4 225 38.7
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 4.6e-25 119.0 239 38.1
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 6.0e-25 118.6 235 38.7
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.0e-24 116.3 229 38.4
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.1e-24 115.5 229 38.9
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 5.1e-24 115.5 203 36.0
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 4.3e-23 112.5 215 33.5
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 5.6e-23 112.1 231 35.9
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 7.3e-23 111.7 202 38.1
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 1.6e-22 110.5 203 36.9
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.6e-22 110.5 179 40.2
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 3.6e-22 109.4 225 36.9
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 8.1e-22 108.2 206 37.4
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 1.8e-21 107.1 231 35.1
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 2.4e-21 106.7 221 33.5
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 3.1e-21 106.3 209 36.8
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 3.1e-21 106.3 235 37.0
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 4.0e-21 105.9 210 36.7
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 5.2e-21 105.5 205 37.1
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 6.9e-21 105.1 190 37.9
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 6.9e-21 105.1 210 33.8
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 2.0e-20 103.6 229 34.5
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 2.0e-20 103.6 235 36.2
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 3.4e-20 102.8 229 35.8
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 4.4e-20 102.4 212 36.3
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 4.4e-20 102.4 212 36.3
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.9e-19 99.8 204 35.8
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 4.9e-19 99.0 212 36.8
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 4.2e-18 95.9 221 35.3
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 4.2e-18 95.9 216 35.6
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 1.2e-17 94.4 207 36.7
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.2e-17 94.4 211 34.1
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 4.6e-17 92.4 244 35.7
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 3.0e-16 89.7 204 32.8
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 3.0e-16 89.7 204 32.8
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 5.1e-16 89.0 178 36.5
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 8.7e-16 88.2 208 34.6
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 6.2e-14 82.0 203 34.0
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 2.4e-13 80.1 212 31.6
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 6.9e-13 78.6 203 34.0
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 3.2e-10 69.7 202 28.2
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 1.6e-09 67.4 204 33.8
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 1.3e-08 64.3 164 32.9
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.3e-08 64.3 147 36.7
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 3.0e-08 63.2 182 29.1
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 4.3e-07 59.3 180 28.9
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 4.3e-07 59.3 180 28.9
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 3.6e-06 56.2 216 30.6
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 4.8e-06 55.8 188 27.1


User provided reference genes

Program Settings