Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G008220 Citrullus lanatus HOM05D004109 ORTHO05D005867 1.2e-278 962.6 491 100.0
MELO3C002828.2 Cucumis melo HOM05D004109 ORTHO05D005867 9.1e-268 926.4 491 96.5
CsaV3_1G037190 Cucumis sativus L. HOM05D004109 ORTHO05D005867 1.6e-267 925.6 491 95.9
Sed0002561 Sechium edule HOM05D004109 ORTHO05D005867 8.9e-263 909.8 491 94.7
Sed0019466 Sechium edule HOM05D004109 ORTHO05D005867 3.5e-259 897.9 491 93.7
Cfa002071 Carpinus fangiana HOM05D004109 ORTHO05D005867 5.4e-228 794.3 491 83.1
GSVIVG01001692001 Vitis vinifera HOM05D004109 ORTHO05D005867 1.2e-227 793.1 491 81.9
FvH4_3g10270 Fragaria vesca HOM05D004109 ORTHO05D005867 2.3e-226 788.9 491 81.7
Potri.001G465300 Populus trichocarpa HOM05D004109 ORTHO05D005867 2.5e-225 785.4 441 89.3
Potri.011G163400 Populus trichocarpa HOM05D004109 ORTHO05D005867 3.3e-225 785.0 491 82.9
Gohir.A13G125500 Gossypium hirsutum HOM05D004109 ORTHO05D005867 9.6e-225 783.5 495 81.6
Prupe.4G091700 Prunus persica HOM05D004109 ORTHO05D005867 1.2e-224 783.1 492 81.7
Gohir.D13G129300 Gossypium hirsutum HOM05D004109 ORTHO05D005867 2.8e-224 781.9 495 81.4
Ciclev10015058m.g Citrus clementina HOM05D004109 ORTHO05D005867 3.6e-224 781.6 490 80.8
Duzib160G0240 Durio zibethinus HOM05D004109 ORTHO05D005867 6.2e-224 780.8 491 80.4
Gorai.013G145300 Gossypium raimondii HOM05D004109 ORTHO05D005867 6.2e-224 780.8 493 81.1
MD10G1251700 Malus domestica HOM05D004109 ORTHO05D005867 6.2e-224 780.8 489 82.6
Solyc02g071890.3 Solanum lycopersicum HOM05D004109 ORTHO05D005867 1.1e-223 780.0 492 80.5
PGR083G1643 Punica granatum HOM05D004109 ORTHO05D005867 1.8e-223 779.2 491 81.1
Sabra11G0141200 Salix brachista HOM05D004109 ORTHO05D005867 3.1e-223 778.5 484 83.1
COL.COLO4_13719 Corchorus olitorius HOM05D004109 ORTHO05D005867 5.3e-223 777.7 492 81.1
Nitab4.5_0001778g0190 Nicotiana tabacum HOM05D004109 ORTHO05D005867 6.9e-223 777.3 491 80.7
CANSAT01G0468 Cannabis sativa HOM05D004109 ORTHO05D005867 4.4e-222 774.6 490 81.4
Hma1.2p1_0892F.1_g233350 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 7.6e-222 773.9 490 80.4
Atru.chr12.891 Acer truncatum HOM05D004109 ORTHO05D005867 1.3e-221 773.1 439 87.9
Nitab4.5_0001793g0060 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.7e-221 772.7 492 79.3
MD05G1271100 Malus domestica HOM05D004109 ORTHO05D005867 3.8e-221 771.5 436 89.4
Cpa.g.sc139.36 Carica papaya HOM05D004109 ORTHO05D005867 2.1e-219 765.8 491 79.4
EL10Ac1g00099 Beta vulgaris HOM05D004109 ORTHO05D005867 2.7e-219 765.4 486 80.0
RcHm_v2.0_Chr5g0016531 Rosa chinensis HOM05D004109 ORTHO05D005867 7.8e-219 763.8 439 87.9
CAN.G411.27 Capsicum annuum HOM05D004109 ORTHO05D005867 5.1e-218 761.1 454 83.9
Eucgr.D00111 Eucalyptus grandis HOM05D004109 ORTHO05D005867 6.6e-218 760.8 444 86.0
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 8.7e-218 760.4 495 80.0
CiPaw.09G142500 Carya illinoinensis HOM05D004109 ORTHO05D005867 8.7e-218 760.4 451 84.9
Migut.B01142 Erythranthe guttata HOM05D004109 ORTHO05D005867 1.5e-217 759.6 491 79.6
Lj7A233T12 Lonicera japonica HOM05D004109 ORTHO05D005867 2.5e-217 758.8 437 86.5
ECA238G2995 Erigeron canadensis HOM05D004109 ORTHO05D005867 4.3e-217 758.1 475 81.1
Sopen02g020880 Solanum pennellii HOM05D004109 ORTHO05D005867 4.3e-217 758.1 439 86.6
FAN11G0285 Fragaria x ananassa HOM05D001785 ORTHO05D001933 5.6e-217 757.7 450 85.6
Nn7g37134 Nelumbo nucifera HOM05D004109 ORTHO05D005867 5.6e-217 757.7 464 82.3
AUR62000071 Chenopodium quinoa HOM05D004109 ORTHO05D005867 7.3e-217 757.3 449 84.2
Manes.06G058300 Manihot esculenta HOM05D004109 ORTHO05D005867 9.6e-217 756.9 432 87.7
Ah.05g178270 Amaranthus hybridus HOM05D004109 ORTHO05D005867 4.8e-216 754.6 492 78.7
CSS0030683 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 8.1e-216 753.8 435 87.4
TAR369G0339 Trochodendron aralioides HOM05D004109 ORTHO05D005867 1.8e-215 752.7 436 86.7
Nitab4.5_0008572g0030 Nicotiana tabacum HOM05D004109 ORTHO05D005867 2.4e-215 752.3 475 79.8
MSTRG.20474 Avicennia marina HOM05D004109 ORTHO05D005867 3.1e-215 751.9 441 85.0
HanXRQChr07g0201181 Helianthus annuus HOM05D004109 ORTHO05D005867 5.3e-215 751.1 441 84.8
Hund27096 Selenicereus undatus HOM05D004109 ORTHO05D005867 5.3e-215 751.1 493 77.1
DCAR_003019 Daucus carota HOM05D004109 ORTHO05D005867 2.6e-214 748.8 491 77.2
Lsat_1_v5_gn_2_116541 Lactuca sativa HOM05D004109 ORTHO05D005867 2.6e-214 748.8 472 80.3
QL08p023474 Quercus lobata HOM05D004109 ORTHO05D005867 2.6e-214 748.8 461 82.9
Thecc.10G182100 Theobroma cacao HOM05D004109 ORTHO05D005867 3.4e-214 748.4 449 84.6
Sabra16G0315800 Salix brachista HOM05D004109 ORTHO05D005867 4.5e-214 748.0 449 85.1
PSO675G4088 Papaver somniferum HOM05D004109 ORTHO05D005867 5.8e-214 747.7 485 77.7
MBI02_g14218_MAGBIO Magnolia biondii HOM05D004109 ORTHO05D005867 7.6e-214 747.3 467 80.5
Duzib192G0069 Durio zibethinus HOM05D004109 ORTHO05D005867 9.9e-214 746.9 439 85.9
A06p30510 Brassica napus HOM05D004109 ORTHO05D005867 1.3e-213 746.5 467 80.3
Cc02_g32120 Coffea canephora HOM05D004109 ORTHO05D005867 1.3e-213 746.5 456 82.0
BraA06t26000Z Brassica rapa HOM05D004109 ORTHO05D005867 1.7e-213 746.1 467 80.3
BcaC01g02640 Brassica carinata HOM05D004109 ORTHO05D005867 2.2e-213 745.7 467 79.9
Glyma.15G131700 Glycine max HOM05D004109 ORTHO05D005867 2.9e-213 745.3 439 84.3
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 3.8e-213 745.0 474 81.2
THA.LOC104799477 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 3.8e-213 745.0 439 83.6
C03p62550 Brassica napus HOM05D004109 ORTHO05D005867 4.9e-213 744.6 467 79.9
BolC3t18512H Brassica oleracea HOM05D004109 ORTHO05D005867 4.9e-213 744.6 467 79.9
Aqoxy7G00406 Aquilegia oxysepala HOM05D004109 ORTHO05D005867 6.4e-213 744.2 467 81.6
BcaB02g09768 Brassica carinata HOM05D004109 ORTHO05D005867 6.4e-213 744.2 467 79.9
Carub.0008s2466 Capsella rubella HOM05D004109 ORTHO05D005867 8.4e-213 743.8 443 84.0
THA.LOC104810828 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 1.1e-212 743.4 439 83.8
PSO675G5109 Papaver somniferum HOM05D004109 ORTHO05D005867 1.4e-212 743.0 486 77.6
Rhsim07G0074000 Rhododendron simsii HOM05D004109 ORTHO05D005867 1.9e-212 742.7 439 84.5
Glyma.09G025600 Glycine max HOM05D004109 ORTHO05D005867 2.4e-212 742.3 446 83.4
AL8G41120 Arabidopsis lyrata HOM05D004109 ORTHO05D005867 3.2e-212 741.9 441 83.2
BraA09t36495Z Brassica rapa HOM05D004109 ORTHO05D005867 5.4e-212 741.1 446 82.5
Cfa005415 Carpinus fangiana HOM05D004109 ORTHO05D005867 5.4e-212 741.1 492 79.1
Thhalv10004035m.g Eutrema salsugineum HOM05D004109 ORTHO05D005867 5.4e-212 741.1 443 83.1
A09p08450 Brassica napus HOM05D004109 ORTHO05D005867 7.1e-212 740.7 446 82.5
CARHR277790 Cardamine hirsuta HOM05D004109 ORTHO05D005867 9.3e-212 740.3 443 82.6
AT5G63890 Arabidopsis thaliana HOM05D004109 ORTHO05D005867 1.6e-211 739.6 437 83.8
BcaNung04636 Brassica carinata HOM05D004109 ORTHO05D005867 1.6e-211 739.6 443 82.6
Ca_00854_v3 Cicer arietinum L. HOM05D004109 ORTHO05D005867 2.1e-211 739.2 436 84.9
Aa31LG1G12300 Aethionema arabicum HOM05D004109 ORTHO05D005867 2.7e-211 738.8 439 83.1
Sp2g26950 Schrenkiella parvula HOM05D004109 ORTHO05D005867 3.5e-211 738.4 436 83.7
RcHm_v2.0_Chr7g0241131 Rosa chinensis HOM05D004109 ORTHO05D005867 7.9e-211 737.3 493 78.5
SGA_v2.0_scaffold114G32023 Striga asiatica HOM05D004109 ORTHO05D005867 7.9e-211 737.3 484 77.3
BcaC04g23349 Brassica carinata HOM05D004109 ORTHO05D005867 2.3e-210 735.7 443 82.2
BolC9t53868H Brassica oleracea HOM05D004109 ORTHO05D005867 2.3e-210 735.7 443 82.2
FAN21G0038 Fragaria x ananassa HOM05D001785 ORTHO05D001933 3.0e-210 735.3 488 77.7
Lj4g0018356 Lotus japonicus HOM05D004109 ORTHO05D005867 3.9e-210 734.9 435 84.1
Lj6g0008240 Lotus japonicus HOM05D004109 ORTHO05D005867 3.9e-210 734.9 485 76.9
Phvul.006G126900 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 5.1e-210 734.6 439 82.9
arahy.Tifrunner.gnm1.ann1.E4EMQ7 Arachis hypogaea HOM05D004109 ORTHO05D005867 6.7e-210 734.2 482 77.0
Lalb_Chr20g0120131 Lupinus albus HOM05D004109 ORTHO05D005867 6.7e-210 734.2 439 83.8
C09p09570 Brassica napus HOM05D004109 ORTHO05D005867 5.6e-209 731.1 443 81.7
Psat1g166680 Pisum sativum HOM05D004109 ORTHO05D005867 5.6e-209 731.1 436 83.5
Medtr2g030520 Medicago truncatula HOM05D004109 ORTHO05D005867 4.8e-208 728.0 488 76.2
Glyma.08G081500 Glycine max HOM05D004109 ORTHO05D005867 6.2e-208 727.6 436 82.6
Os01g0232700 Oryza sativa ssp. japonica HOM05D004109 ORTHO05D005867 6.2e-208 727.6 432 83.6
Phvul.002G198300 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 6.2e-208 727.6 436 83.0
TWI63G1440 Tripterygium wilfordii HOM05D004109 ORTHO05D005867 8.1e-208 727.2 491 77.4
FAN25G1737 Fragaria x ananassa HOM05D001785 ORTHO05D001933 1.8e-207 726.1 486 76.5
arahy.Tifrunner.gnm1.ann1.S2DTMZ Arachis hypogaea HOM05D004109 ORTHO05D005867 5.3e-207 724.5 437 81.9
FAN16G0137 Fragaria x ananassa HOM05D001785 ORTHO05D001933 6.9e-207 724.2 488 76.6
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 2.6e-206 722.2 437 81.7
arahy.Tifrunner.gnm1.ann1.X3TBAN Arachis hypogaea HOM05D004109 ORTHO05D005867 2.6e-206 722.2 509 73.7
HPP92_000958 Vanilla planifolia HOM05D004109 ORTHO05D005867 1.4e-204 716.5 435 81.4
CDE06G2252 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 2.5e-204 715.7 431 81.7
vmacro13807 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 3.2e-204 715.3 428 84.3
ATR0810G187 Amborella trichopoda HOM05D004109 ORTHO05D005867 3.5e-203 711.8 431 81.7
unitig_0.g2208 Utricularia gibba HOM05D004109 ORTHO05D005867 1.9e-201 706.1 431 81.0
VMungo0540G0358 Vigna mungo HOM05D004109 ORTHO05D005867 3.7e-200 701.8 448 79.5
CDE03G0162 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 6.9e-199 697.6 437 78.9
SEGI_09299 Sequoiadendron giganteum HOM05D004109 ORTHO05D005867 4.2e-196 688.3 433 78.5
Sc26g0000620 Simmondsia chinensis HOM05D004109 ORTHO05D005867 1.2e-195 686.8 413 82.6
Nitab4.5_0003703g0080 Nicotiana tabacum HOM05D004109 ORTHO05D005867 3.7e-192 675.2 388 86.1
BcaNung04631 Brassica carinata HOM05D004109 ORTHO05D005867 9.4e-188 660.6 439 77.0
Pp3c25_2460 Physcomitrium patens HOM05D004109 ORTHO05D005867 3.3e-185 652.1 432 73.6
Pp3c16_4820 Physcomitrium patens HOM05D004109 ORTHO05D005867 2.2e-181 639.4 432 73.1
Mapoly0060s0093 Marchantia polymorpha HOM05D004109 ORTHO05D005867 6.5e-181 637.9 451 71.2
AagrBONN_evm.TU.Sc2ySwM_228.1565 Anthoceros agrestis HOM05D004109 ORTHO05D005867 1.3e-176 623.6 469 69.1
SMO137G0061 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 2.2e-176 622.9 427 74.5
Cre02.g077350 Chlamydomonas reinhardtii HOM05D004109 ORTHO05D005867 6.1e-171 604.7 427 71.0
CBR_g8928 Chara braunii HOM05D004109 ORTHO05D005867 1.4e-170 603.6 430 69.8
AUR62019245 Chenopodium quinoa HOM05D004109 ORTHO05D005867 2.0e-169 599.7 359 83.3
PRCOL_00002586 Prasinoderma coloniale HOM05D004109 ORTHO05D005867 5.3e-167 591.7 431 68.9
vmacro23219 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 5.7e-161 571.6 478 66.9
MCO06G190 Micromonas commoda HOM05D004109 ORTHO05D005867 7.7e-158 561.2 428 67.1
CSS0014434 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.8e-152 542.7 318 86.5
Dinv23908 Davidia involucrata HOM05D004109 ORTHO05D005867 5.9e-150 535.0 315 85.1
Haze_16420 Corylus avellana HOM05D004109 ORTHO05D005867 1.1e-124 451.1 300 78.3
Cfa023091 Carpinus fangiana HOM05D004109 ORTHO05D005867 6.0e-118 428.7 461 49.2
SMO170G0053 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 3.3e-116 422.9 330 68.8
Zm00001eb059830 Zea mays HOM05D004109 ORTHO05D005867 3.3e-116 422.9 258 82.2
Peaxi162Scf00112g01722 Petunia axillaris HOM05D004109 ORTHO05D005867 2.4e-114 416.8 233 87.1
TPR.G26361 Trifolium pratense HOM05D004109 ORTHO05D005867 1.7e-112 410.6 258 79.8
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 5.4e-111 405.6 258 78.7
Peaxi162Scf00112g01719 Petunia axillaris HOM05D004109 ORTHO05D005867 6.4e-96 355.5 257 73.2
Migut.B01141 Erythranthe guttata HOM05D004109 ORTHO05D005867 3.7e-91 339.7 405 53.3
Actinidia34688 Actinidia chinensis HOM05D004109 ORTHO05D005867 1.3e-88 331.3 201 83.1
Haze_01914 Corylus avellana HOM05D004109 ORTHO05D005867 2.2e-88 330.5 182 89.6
VMungo0251G3018 Vigna mungo HOM05D004109 ORTHO05D005867 8.7e-85 318.5 177 87.0
Haze_01911 Corylus avellana HOM05D004109 ORTHO05D001172 6.3e-75 285.8 228 68.4
PSO675G6350 Papaver somniferum HOM05D004109 ORTHO05D005867 2.1e-70 270.8 182 75.8
Haze_27135 Corylus avellana HOM05D004109 ORTHO05D005867 2.3e-69 267.3 420 40.7
BolC8t51924H Brassica oleracea HOM05D004109 ORTHO05D005867 2.4e-66 257.3 217 63.6
C01p45280 Brassica napus HOM05D004109 ORTHO05D005867 3.4e-65 253.4 223 62.3
C03p60030 Brassica napus HOM05D004109 ORTHO05D005867 2.9e-64 250.4 217 62.2
BolC3t15408H Brassica oleracea HOM05D004109 ORTHO05D005867 6.5e-64 249.2 245 58.0
Lsat_1_v5_gn_0_46200 Lactuca sativa HOM05D004109 ORTHO05D005867 1.1e-63 248.4 289 47.8
TPR.G39866 Trifolium pratense HOM05D004109 ORTHO05D005867 8.2e-59 232.3 122 90.2
BcaC01g02810 Brassica carinata HOM05D004109 ORTHO05D005867 2.4e-58 230.7 215 58.1
CSS0037475 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 6.3e-51 206.1 116 87.1
SMO137G0105 Selaginella moellendorffii HOM05D004109 ORTHO05D019780 2.8e-43 180.6 188 55.9
PGSC0003DMG400028409 Solanum tuberosum HOM05D004109 ORTHO05D005867 6.5e-40 169.5 89 92.1
CSS0025757 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 9.4e-39 165.6 95 86.3
vmacro20533 Vaccinium macrocarpon HOM05D004109 ORTHO05D000800 7.7e-33 146.0 161 54.0
Lsat_1_v5_gn_0_43980 Lactuca sativa HOM05D004109 ORTHO05D005867 8.3e-27 125.9 127 47.2
vmacro20532 Vaccinium macrocarpon HOM05D004109 ORTHO05D426529 3.5e-25 120.6 136 52.9
Lsat_1_v5_gn_2_130860 Lactuca sativa HOM05D004109 ORTHO05D019780 5.6e-23 113.2 67 83.6
HanXRQChr17g0545961 Helianthus annuus HOM05D004109 ORTHO05D225632 2.8e-22 110.9 83 62.7
BcaC09g48845 Brassica carinata HOM05D004109 ORTHO05D009034 3.1e-21 107.5 212 38.7
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 7.5e-20 102.8 125 49.6
Hma1.2p1_0258F.1_g104030 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 6.4e-19 99.8 64 79.7
vmacro20529 Vaccinium macrocarpon HOM05D004109 ORTHO05D427059 2.3e-16 91.3 122 47.5
PSO063G0645 Papaver somniferum HOM05D004109 ORTHO05D019780 8.6e-16 89.4 57 77.2
AagrBONN_evm.TU.Sc2ySwM_117.3019 Anthoceros agrestis HOM05D000719 ORTHO05D000569 2.5e-15 87.8 66 68.2
BolC3t18268H Brassica oleracea HOM05D004109 ORTHO05D005867 3.1e-13 80.9 45 88.9
Actinidia02690 Actinidia chinensis HOM05D004109 ORTHO05D054316 1.5e-12 78.6 53 73.6
arahy.Tifrunner.gnm1.ann1.P7LCDJ Arachis hypogaea HOM05D004109 ORTHO05D019780 2.2e-11 74.7 48 77.1
BolC3t18267H Brassica oleracea HOM05D004109 ORTHO05D019780 1.1e-10 72.4 46 78.3
arahy.Tifrunner.gnm1.ann1.V2D64V Arachis hypogaea HOM05D004109 ORTHO05D019780 1.4e-10 72.0 69 59.4
vmacro09568 Vaccinium macrocarpon HOM05D004109 ORTHO05D003511 2.1e-09 68.2 69 60.9
Glyma.20G022700 Glycine max HOM05D004109 ORTHO05D019780 1.7e-08 65.1 37 86.5
Zm00001eb213480 Zea mays HOM05D002921 ORTHO05D003258 7.3e-07 59.7 55 61.8
SMO137G0306 Selaginella moellendorffii HOM05D004109 ORTHO05D377039 2.8e-06 57.8 31 80.6
Lsat_1_v5_gn_3_28400 Lactuca sativa HOM05D001423 ORTHO05D048396 4.7e-06 57.0 43 65.1
vmacro07499 Vaccinium macrocarpon HOM05D004109 ORTHO05D426741 4.7e-06 57.0 58 56.9


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