Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G006790 Citrullus lanatus HOM05D002924 ORTHO05D028993 3.8e-49 198.0 109 100.0
MELO3C002741.2 Cucumis melo HOM05D065241 ORTHO05D028993 1.1e-24 116.7 123 64.2
CsaV3_1G032370 Cucumis sativus L. HOM05D065241 ORTHO05D028993 8.0e-23 110.5 122 59.0
Sed0018194 Sechium edule HOM05D002924 ORTHO05D028993 2.3e-17 92.4 116 48.3
Sed0024828 Sechium edule HOM05D002924 ORTHO05D003122 3.7e-12 75.1 121 43.8
Actinidia39583 Actinidia chinensis HOM05D002924 ORTHO05D003122 1.3e-09 66.6 126 41.3
Actinidia07706 Actinidia chinensis HOM05D002924 ORTHO05D003122 3.0e-09 65.5 121 43.8
MD10G1260700 Malus domestica HOM05D002924 ORTHO05D003122 3.0e-09 65.5 112 42.9
Nitab4.5_0001531g0050 Nicotiana tabacum HOM05D002924 ORTHO05D003122 3.0e-09 65.5 82 51.2
Peaxi162Scf00394g00120 Petunia axillaris HOM05D002924 ORTHO05D003122 3.0e-09 65.5 123 41.5
Sed0007473 Sechium edule HOM05D002924 ORTHO05D003122 6.6e-09 64.3 122 39.3
CiPaw.09G122300 Carya illinoinensis HOM05D002924 ORTHO05D003122 1.5e-08 63.2 83 48.2
GSVIVG01021514001 Vitis vinifera HOM05D002924 ORTHO05D003122 1.5e-08 63.2 124 43.5
Glyma.15G093100 Glycine max HOM05D002924 ORTHO05D003122 2.5e-08 62.4 131 36.6
CsaV3_6G051810 Cucumis sativus L. HOM05D002924 ORTHO05D003122 3.3e-08 62.0 93 44.1
MD05G1282100 Malus domestica HOM05D002924 ORTHO05D003122 3.3e-08 62.0 111 41.4
CSS0028188 Camellia sinensis var. sinensis HOM05D002924 ORTHO05D003122 4.3e-08 61.6 107 39.3
Gohir.D05G150200 Gossypium hirsutum HOM05D002924 ORTHO05D003122 4.3e-08 61.6 117 41.9
Nitab4.5_0001531g0020 Nicotiana tabacum HOM05D002924 ORTHO05D003122 4.3e-08 61.6 124 37.1
Prupe.4G082500 Prunus persica HOM05D002924 ORTHO05D003122 4.3e-08 61.6 122 41.8
GSVIVG01021518001 Vitis vinifera HOM05D002924 ORTHO05D003122 4.3e-08 61.6 80 46.2
PSO675G3356 Papaver somniferum HOM05D002924 ORTHO05D003122 5.6e-08 61.2 121 41.3
QL05p059253 Quercus lobata HOM05D002924 ORTHO05D003122 5.6e-08 61.2 125 36.8
MELO3C007125.2 Cucumis melo HOM05D002924 ORTHO05D003122 7.3e-08 60.8 92 43.5
Dinv32237 Davidia involucrata HOM05D002924 ORTHO05D003122 9.5e-08 60.5 126 37.3
Nitab4.5_0005246g0010 Nicotiana tabacum HOM05D002924 ORTHO05D003122 9.5e-08 60.5 135 37.0
CiPaw.10G090800 Carya illinoinensis HOM05D002924 ORTHO05D003122 1.6e-07 59.7 79 45.6
Rhsim13G0114700 Rhododendron simsii HOM05D002924 ORTHO05D003122 1.6e-07 59.7 119 37.0
Nn4g26591 Nelumbo nucifera HOM05D002924 ORTHO05D003122 2.1e-07 59.3 130 40.8
TWI09G0754 Tripterygium wilfordii HOM05D002924 ORTHO05D003122 2.1e-07 59.3 118 36.4
GSVIVG01007188001 Vitis vinifera HOM05D002924 ORTHO05D003122 2.1e-07 59.3 92 42.4
ClCG01G024700 Citrullus lanatus HOM05D002924 ORTHO05D003122 2.8e-07 58.9 90 43.3
Duzib160G0328 Durio zibethinus HOM05D002924 ORTHO05D003122 2.8e-07 58.9 121 40.5
Cpa.g.sc17.12 Carica papaya HOM05D002924 ORTHO05D003122 3.6e-07 58.5 119 37.0
Gorai.009G154300 Gossypium raimondii HOM05D002924 ORTHO05D003122 3.6e-07 58.5 122 41.0
Solyc08g036660.4 Solanum lycopersicum HOM05D002924 ORTHO05D003122 4.7e-07 58.2 132 34.1
Cc00_g01970 Coffea canephora HOM05D002924 ORTHO05D003122 6.2e-07 57.8 72 50.0
Gohir.A10G041900 Gossypium hirsutum HOM05D002924 ORTHO05D003122 6.2e-07 57.8 116 38.8
Gohir.D10G042800 Gossypium hirsutum HOM05D002924 ORTHO05D003122 6.2e-07 57.8 116 38.8
Phvul.006G165800 Phaseolus vulgaris HOM05D002924 ORTHO05D003122 6.2e-07 57.8 127 36.2
PGSC0003DMG400008781 Solanum tuberosum HOM05D002924 ORTHO05D003122 6.2e-07 57.8 121 38.0
CANSAT35G0631 Cannabis sativa HOM05D002924 ORTHO05D003122 8.0e-07 57.4 89 44.9
Lsat_1_v5_gn_7_28101 Lactuca sativa HOM05D002924 ORTHO05D003122 8.0e-07 57.4 127 38.6
Peaxi162Scf00317g00117 Petunia axillaris HOM05D002924 ORTHO05D003122 8.0e-07 57.4 129 37.2
Peaxi162Scf00317g00121 Petunia axillaris HOM05D002924 ORTHO05D003122 8.0e-07 57.4 121 37.2
PGSC0003DMG400001174 Solanum tuberosum HOM05D002924 ORTHO05D003122 8.0e-07 57.4 113 36.3
MSTRG.16253 Avicennia marina HOM05D002924 ORTHO05D003122 1.1e-06 57.0 70 50.0
Medtr2g019190 Medicago truncatula HOM05D002924 ORTHO05D003122 1.1e-06 57.0 132 35.6
QL05p057398 Quercus lobata HOM05D002924 ORTHO05D003122 1.1e-06 57.0 136 35.3
SalBow8G3543 Salvia bowleyana HOM05D002924 ORTHO05D003122 1.1e-06 57.0 119 41.2
COL.COLO4_31051 Corchorus olitorius HOM05D002924 ORTHO05D003122 1.4e-06 56.6 120 35.8
Thecc.06G148600 Theobroma cacao HOM05D002924 ORTHO05D003122 1.4e-06 56.6 124 39.5
MSTRG.7496 Avicennia marina HOM05D002924 ORTHO05D003122 1.8e-06 56.2 118 38.1
Gohir.A05G147700 Gossypium hirsutum HOM05D002924 ORTHO05D003122 1.8e-06 56.2 117 41.0
Gorai.011G045300 Gossypium raimondii HOM05D002924 ORTHO05D003122 1.8e-06 56.2 116 37.9
Manes.15G122900 Manihot esculenta HOM05D002924 ORTHO05D003122 2.3e-06 55.8 132 37.1
Duzib235G1474 Durio zibethinus HOM05D002924 ORTHO05D003122 3.1e-06 55.5 117 39.3
MD05G1282000 Malus domestica HOM05D002924 ORTHO05D003122 3.1e-06 55.5 77 46.8
VMungo0540G0736 Vigna mungo HOM05D002924 ORTHO05D003122 3.1e-06 55.5 131 35.9
GSVIVG01021516001 Vitis vinifera HOM05D002924 ORTHO05D003122 3.1e-06 55.5 124 38.7
Aqoxy1G01686 Aquilegia oxysepala HOM05D002924 ORTHO05D003122 4.0e-06 55.1 120 37.5
ClCG03G006750 Citrullus lanatus HOM05D002924 ORTHO05D003122 4.0e-06 55.1 82 43.9
Potri.006G023301 Populus trichocarpa HOM05D002924 ORTHO05D003122 4.0e-06 55.1 119 41.2
Sopen08g011410 Solanum pennellii HOM05D002924 ORTHO05D003122 4.0e-06 55.1 80 42.5
TAR488G0001 Trochodendron aralioides HOM05D002924 ORTHO05D003122 5.2e-06 54.7 117 36.8
Lalb_Chr15g0086781 Lupinus albus HOM05D002924 ORTHO05D003122 6.8e-06 54.3 80 47.5
Nitab4.5_0009991g0010 Nicotiana tabacum HOM05D002924 ORTHO05D003122 6.8e-06 54.3 80 46.2
PGSC0003DMG400001178 Solanum tuberosum HOM05D002924 ORTHO05D003122 6.8e-06 54.3 110 37.3
Atru.chr10.1192 Acer truncatum HOM05D002924 ORTHO05D003122 8.9e-06 53.9 134 36.6
vmacro03333 Vaccinium macrocarpon HOM05D002924 ORTHO05D003122 8.9e-06 53.9 120 34.2


User provided reference genes

Program Settings