Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G004480 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.9e-49 198.7 94 100.0
ClCG06G001050 Citrullus lanatus HOM05D001521 ORTHO05D001342 2.3e-34 148.7 84 78.6
ClCG06G001040 Citrullus lanatus HOM05D001521 ORTHO05D001342 6.0e-27 124.0 84 71.4
CsaV3_6G006920 Cucumis sativus L. HOM05D001521 ORTHO05D001342 6.7e-26 120.6 84 70.2
ClCG03G004470 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.6e-24 115.9 75 80.0
MELO3C022434.2 Cucumis melo HOM05D001521 ORTHO05D001342 3.7e-24 114.8 84 63.1
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 6.0e-19 97.4 93 53.8
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 5.1e-18 94.4 93 52.7
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.1e-17 93.2 84 56.0
GSVIVG01028618001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.5e-17 92.8 93 52.7
Actinidia11759 Actinidia chinensis HOM05D001521 ORTHO05D001342 4.3e-17 91.3 93 50.5
TAR371G0196 Trochodendron aralioides HOM05D001521 ORTHO05D001342 4.3e-17 91.3 93 51.6
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 5.7e-17 90.9 93 49.5
GSVIVG01028617001 Vitis vinifera HOM05D001521 ORTHO05D001342 5.7e-17 90.9 84 57.1
Aqoxy7G03595 Aquilegia oxysepala HOM05D001521 ORTHO05D001342 7.4e-17 90.5 84 53.6
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 1.6e-16 89.4 93 49.5
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 3.7e-16 88.2 93 49.5
Dinv37733 Davidia involucrata HOM05D001521 ORTHO05D001342 3.7e-16 88.2 93 51.6
Hma1.2p1_0033F.1_g020970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 4.8e-16 87.8 84 51.2
Hma1.2p1_0033F.1_g020980 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 4.8e-16 87.8 84 51.2
Dinv37719 Davidia involucrata HOM05D001521 ORTHO05D001342 1.8e-15 85.9 93 49.5
CSS0010403 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 2.4e-15 85.5 84 50.0
Sed0027339 Sechium edule HOM05D001521 ORTHO05D001342 2.4e-15 85.5 84 47.6
GSVIVG01028606001 Vitis vinifera HOM05D001521 ORTHO05D001342 2.4e-15 85.5 93 49.5
Rhsim05G0011700 Rhododendron simsii HOM05D001521 ORTHO05D001342 5.3e-15 84.3 93 49.5
ClCG06G001060 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.2e-14 83.2 84 47.6
Rhsim08G0035600 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.5e-14 82.8 84 52.4
Lj1P1067T12 Lonicera japonica HOM05D001521 ORTHO05D001342 2.0e-14 82.4 85 50.6
Sed0020102 Sechium edule HOM05D001521 ORTHO05D001342 2.0e-14 82.4 84 46.4
Sed0023613 Sechium edule HOM05D001521 ORTHO05D001342 2.0e-14 82.4 84 46.4
Sed0027833 Sechium edule HOM05D001521 ORTHO05D001342 2.0e-14 82.4 93 46.2
Sed0028148 Sechium edule HOM05D001521 ORTHO05D001342 2.0e-14 82.4 82 47.6
Rhsim05G0011500 Rhododendron simsii HOM05D001521 ORTHO05D001342 3.4e-14 81.6 84 53.6
Rhsim05G0010000 Rhododendron simsii HOM05D001521 ORTHO05D001342 4.5e-14 81.3 93 48.4
Rhsim05G0011200 Rhododendron simsii HOM05D001521 ORTHO05D001342 5.9e-14 80.9 84 47.6
CsaV3_6G006960 Cucumis sativus L. HOM05D001521 ORTHO05D001342 7.7e-14 80.5 84 47.6
Rhsim07G0026400 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.0e-13 80.1 84 51.2
CsaV3_6G006970 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.3e-13 79.7 84 45.2
Lj4P822T29 Lonicera japonica HOM05D001521 ORTHO05D001342 1.3e-13 79.7 85 49.4
MELO3C022429.2 Cucumis melo HOM05D001521 ORTHO05D001342 2.2e-13 79.0 84 45.2
CsaV3_6G006870 Cucumis sativus L. HOM05D001521 ORTHO05D001342 3.8e-13 78.2 84 45.2
CsaV3_6G006990 Cucumis sativus L. HOM05D001521 ORTHO05D001342 6.5e-13 77.4 76 47.4
CANSAT21G0839 Cannabis sativa HOM05D001521 ORTHO05D001342 8.5e-13 77.0 84 45.2
CsaV3_6G006950 Cucumis sativus L. HOM05D001521 ORTHO05D001342 8.5e-13 77.0 87 43.7
SalBow6G2139 Salvia bowleyana HOM05D001521 ORTHO05D001342 8.5e-13 77.0 83 44.6
Sed0023711 Sechium edule HOM05D001521 ORTHO05D001342 8.5e-13 77.0 85 45.9
MELO3C022430.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.1e-12 76.6 87 47.1
Gohir.D02G009800 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.1e-12 76.6 84 46.4
Gorai.005G012100 Gossypium raimondii HOM05D001521 ORTHO05D001342 1.1e-12 76.6 84 46.4
Gohir.A02G009500 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.4e-12 76.3 84 47.6
MD01G1104300 Malus domestica HOM05D001521 ORTHO05D001342 1.4e-12 76.3 79 46.8
MELO3C022437.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.9e-12 75.9 84 42.9
CsaV3_6G006900 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.9e-12 75.9 84 44.0
Rhsim05G0009700 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.9e-12 75.9 84 50.0
Sed0017234 Sechium edule HOM05D001521 ORTHO05D001342 1.9e-12 75.9 86 45.3
Cpa.g.sc83.14 Carica papaya HOM05D001521 ORTHO05D001342 3.2e-12 75.1 84 46.4
CsaV3_6G006880 Cucumis sativus L. HOM05D001521 ORTHO05D001342 3.2e-12 75.1 84 39.3
MD07G1171100 Malus domestica HOM05D001521 ORTHO05D001342 3.2e-12 75.1 92 41.3
CsaV3_6G006860 Cucumis sativus L. HOM05D001521 ORTHO05D001342 4.2e-12 74.7 83 42.2
Duzib177G0128 Durio zibethinus HOM05D001521 ORTHO05D001342 4.2e-12 74.7 93 43.0
Duzib177G0777 Durio zibethinus HOM05D001521 ORTHO05D001342 4.2e-12 74.7 93 43.0
CSS0022841 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 5.5e-12 74.3 82 46.3
Prupe.2G097700 Prunus persica HOM05D001521 ORTHO05D001342 5.5e-12 74.3 86 52.3
Cpa.g.sc1831.1 Carica papaya HOM05D001521 ORTHO05D001342 7.2e-12 73.9 87 49.4
Oeu035081.1 Olea europaea HOM05D001521 ORTHO05D001342 7.2e-12 73.9 93 49.5
Duzib177G1034 Durio zibethinus HOM05D001521 ORTHO05D001342 9.4e-12 73.6 93 41.9
Dinv04994 Davidia involucrata HOM05D001521 ORTHO05D001342 1.2e-11 73.2 97 44.3
Duzib177G1049 Durio zibethinus HOM05D001521 ORTHO05D001342 1.2e-11 73.2 93 41.9
Lj1P1067T24 Lonicera japonica HOM05D001521 ORTHO05D001342 1.6e-11 72.8 84 45.2
Cpa.g.sc83.17 Carica papaya HOM05D001521 ORTHO05D001342 2.1e-11 72.4 84 45.2
MELO3C022436.2 Cucumis melo HOM05D001521 ORTHO05D001342 2.1e-11 72.4 84 41.7
Gohir.A02G009148 Gossypium hirsutum HOM05D001521 ORTHO05D001342 2.1e-11 72.4 84 47.6
Gohir.A02G009200 Gossypium hirsutum HOM05D001521 ORTHO05D001342 2.7e-11 72.0 84 47.6
Sed0026868 Sechium edule HOM05D001521 ORTHO05D001342 2.7e-11 72.0 85 47.1
Prupe.2G087400 Prunus persica HOM05D001521 ORTHO05D001342 3.6e-11 71.6 87 51.7
RcHm_v2.0_Chr1g0336971 Rosa chinensis HOM05D001521 ORTHO05D001342 3.6e-11 71.6 84 45.2
Zm00001eb088020 Zea mays HOM05D001521 ORTHO05D001342 4.6e-11 71.2 94 43.6
Gohir.D02G009400 Gossypium hirsutum HOM05D001521 ORTHO05D001342 6.1e-11 70.9 84 47.6
Gohir.D02G009500 Gossypium hirsutum HOM05D001521 ORTHO05D001342 6.1e-11 70.9 84 48.8
Gorai.005G011500 Gossypium raimondii HOM05D001521 ORTHO05D001342 6.1e-11 70.9 84 47.6
Lj9P654T21 Lonicera japonica HOM05D001521 ORTHO05D001342 6.1e-11 70.9 85 44.7
Rhsim05G0009900 Rhododendron simsii HOM05D001521 ORTHO05D001342 6.1e-11 70.9 86 47.7
Dinv37728 Davidia involucrata HOM05D001521 ORTHO05D001342 1.4e-10 69.7 72 50.0
Aqoxy1G04261 Aquilegia oxysepala HOM05D001521 ORTHO05D001342 2.3e-10 68.9 88 46.6
FvH4_7g07020 Fragaria vesca HOM05D001521 ORTHO05D001342 2.3e-10 68.9 85 44.7
FAN06G3326 Fragaria x ananassa HOM05D001521 ORTHO05D001342 2.3e-10 68.9 85 44.7
FAN10G4107 Fragaria x ananassa HOM05D001521 ORTHO05D001342 2.3e-10 68.9 85 44.7
SalBow6G5371 Salvia bowleyana HOM05D001521 ORTHO05D001342 2.3e-10 68.9 84 41.7
Duzib177G0352 Durio zibethinus HOM05D001521 ORTHO05D001342 3.0e-10 68.6 93 40.9
Sed0007160 Sechium edule HOM05D001521 ORTHO05D001342 3.0e-10 68.6 84 45.2
CANSAT80G1970 Cannabis sativa HOM05D001521 ORTHO05D001342 3.9e-10 68.2 83 37.3
Cpa.g.sc567.1 Carica papaya HOM05D001521 ORTHO05D001342 3.9e-10 68.2 84 41.7
Gorai.005G011900 Gossypium raimondii HOM05D001521 ORTHO05D001342 3.9e-10 68.2 84 44.0
Hma1.2p1_0439F.1_g153190 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 3.9e-10 68.2 95 40.0
Zm00001eb087960 Zea mays HOM05D001521 ORTHO05D001342 3.9e-10 68.2 94 41.5
Sed0024723 Sechium edule HOM05D001521 ORTHO05D001342 5.1e-10 67.8 84 39.3
CsaV3_6G006980 Cucumis sativus L. HOM05D001521 ORTHO05D001342 8.8e-10 67.0 87 42.5
Dinv05622 Davidia involucrata HOM05D001521 ORTHO05D001342 8.8e-10 67.0 101 41.6
Duzib177G0760 Durio zibethinus HOM05D001521 ORTHO05D001342 8.8e-10 67.0 84 42.9
Gorai.005G011400 Gossypium raimondii HOM05D001521 ORTHO05D001342 8.8e-10 67.0 84 44.0
Rhsim05G0011800 Rhododendron simsii HOM05D001521 ORTHO05D001342 8.8e-10 67.0 86 45.3
ClCG06G000920 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.5e-09 66.2 84 44.0
Gohir.A02G009300 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.5e-09 66.2 84 45.2
Rhsim05G0010100 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.5e-09 66.2 86 44.2
TAR636G2451 Trochodendron aralioides HOM05D001521 ORTHO05D001342 1.5e-09 66.2 89 42.7
Hma1.2p1_1715F.1_g299020 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.0e-09 65.9 53 60.4
Hma1.2p1_0439F.1_g153140 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.5e-09 65.5 86 44.2
Sed0017923 Sechium edule HOM05D001521 ORTHO05D001342 2.5e-09 65.5 86 43.0
AUR62036893 Chenopodium quinoa HOM05D001521 ORTHO05D001342 4.3e-09 64.7 84 41.7
COL.COLO4_27140 Corchorus olitorius HOM05D001521 ORTHO05D001342 4.3e-09 64.7 87 39.1
Gohir.A02G009180 Gossypium hirsutum HOM05D001521 ORTHO05D001342 4.3e-09 64.7 84 41.7
Gohir.D02G009366 Gossypium hirsutum HOM05D001521 ORTHO05D001342 5.7e-09 64.3 84 44.0
RcHm_v2.0_Chr2g0163571 Rosa chinensis HOM05D001521 ORTHO05D001342 5.7e-09 64.3 76 40.8
CSS0049728 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 7.4e-09 63.9 61 50.8
AUR62040541 Chenopodium quinoa HOM05D001521 ORTHO05D001342 7.4e-09 63.9 84 42.9
Lj9P658T33 Lonicera japonica HOM05D001521 ORTHO05D001342 7.4e-09 63.9 85 40.0
ClCG06G003020 Citrullus lanatus HOM05D001521 ORTHO05D001342 9.7e-09 63.5 85 42.4
Duzib192G0699 Durio zibethinus HOM05D001521 ORTHO05D001342 9.7e-09 63.5 87 42.5
Gohir.D02G009550 Gossypium hirsutum HOM05D001521 ORTHO05D001342 9.7e-09 63.5 83 42.2
SalBow6G1515 Salvia bowleyana HOM05D001521 ORTHO05D001342 9.7e-09 63.5 84 40.5
CSS0039569 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 1.3e-08 63.2 66 56.1
ECA233G0126 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-08 63.2 83 39.8
Gohir.D02G018600 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.3e-08 63.2 84 39.3
Sed0017368 Sechium edule HOM05D001521 ORTHO05D001342 1.3e-08 63.2 83 41.0
Sed0024914 Sechium edule HOM05D001521 ORTHO05D001342 1.3e-08 63.2 85 42.4
Gohir.D02G009600 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.7e-08 62.8 84 41.7
Gorai.005G023100 Gossypium raimondii HOM05D001521 ORTHO05D001342 1.7e-08 62.8 84 39.3
Sed0003936 Sechium edule HOM05D001521 ORTHO05D001342 1.7e-08 62.8 65 47.7
Sc04g0007420 Simmondsia chinensis HOM05D001521 ORTHO05D001342 2.2e-08 62.4 50 62.0
MELO3C021142.2 Cucumis melo HOM05D001521 ORTHO05D001342 2.8e-08 62.0 87 37.9
ClCG06G000900 Citrullus lanatus HOM05D001521 ORTHO05D001342 3.7e-08 61.6 84 40.5
Duzib192G0018 Durio zibethinus HOM05D001521 ORTHO05D001342 3.7e-08 61.6 87 43.7
Lj9P654T39 Lonicera japonica HOM05D001521 ORTHO05D001342 3.7e-08 61.6 76 40.8
CANSAT11G0684 Cannabis sativa HOM05D001521 ORTHO05D001342 6.3e-08 60.8 88 38.6
ClCG06G003010 Citrullus lanatus HOM05D001521 ORTHO05D001342 6.3e-08 60.8 87 36.8
Lj9P163T5 Lonicera japonica HOM05D001521 ORTHO05D001342 6.3e-08 60.8 76 40.8
Rhsim05G0009800 Rhododendron simsii HOM05D001521 ORTHO05D001342 6.3e-08 60.8 84 42.9
CANSAT54G0295 Cannabis sativa HOM05D001521 ORTHO05D001342 8.2e-08 60.5 86 41.9
CANSAT54G1711 Cannabis sativa HOM05D001521 ORTHO05D001342 1.4e-07 59.7 83 34.9
Hma1.2p1_0439F.1_g153130 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.8e-07 59.3 85 41.2
RcHm_v2.0_Chr1g0337031 Rosa chinensis HOM05D001521 ORTHO05D001342 1.8e-07 59.3 93 39.8
ClCG04G001220 Citrullus lanatus HOM05D001521 ORTHO05D001342 2.4e-07 58.9 47 59.6
CsaV3_6G006750 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.4e-07 58.9 97 39.2
MD03G1201500 Malus domestica HOM05D001521 ORTHO05D001342 2.4e-07 58.9 85 42.4
Zm00001eb087980 Zea mays HOM05D001521 ORTHO05D001342 3.1e-07 58.5 96 35.4
Zm00001eb088000 Zea mays HOM05D001521 ORTHO05D001342 3.1e-07 58.5 96 35.4
EL10Ac1g02024 Beta vulgaris HOM05D001521 ORTHO05D001342 4.1e-07 58.2 84 35.7
CsaV3_6G008860 Cucumis sativus L. HOM05D001521 ORTHO05D001342 5.3e-07 57.8 86 40.7
SalBow1G5839 Salvia bowleyana HOM05D001521 ORTHO05D001342 5.3e-07 57.8 59 44.1
Dinv37729 Davidia involucrata HOM05D001521 ORTHO05D001342 6.9e-07 57.4 89 33.7
Gohir.A02G009164 Gossypium hirsutum HOM05D001521 ORTHO05D001342 6.9e-07 57.4 84 39.3
CANSAT11G1279 Cannabis sativa HOM05D001521 ORTHO05D001342 9.1e-07 57.0 88 37.5
Lj6P278T5 Lonicera japonica HOM05D001521 ORTHO05D001342 9.1e-07 57.0 85 37.6
SalBow8G0938 Salvia bowleyana HOM05D001521 ORTHO05D001342 9.1e-07 57.0 66 40.9
Sed0019348 Sechium edule HOM05D001521 ORTHO05D001342 9.1e-07 57.0 52 50.0
ECA232G3207 Erigeron canadensis HOM05D001521 ORTHO05D001342 1.2e-06 56.6 79 40.5
Hma1.2p1_3600F.1_g336970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.2e-06 56.6 85 40.0
CANSAT80G0301 Cannabis sativa HOM05D001521 ORTHO05D001342 1.5e-06 56.2 84 38.1
FAN09G4470 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.5e-06 56.2 76 35.5
ECA247G2522 Erigeron canadensis HOM05D001521 ORTHO05D001342 2.0e-06 55.8 84 33.3
FAN05G2842 Fragaria x ananassa HOM05D001521 ORTHO05D001342 2.6e-06 55.5 79 39.2
Dinv37730 Davidia involucrata HOM05D001521 ORTHO05D001342 3.4e-06 55.1 89 31.5
ECA232G4337 Erigeron canadensis HOM05D001521 ORTHO05D001342 3.4e-06 55.1 90 35.6
FvH4_6g46030 Fragaria vesca HOM05D001521 ORTHO05D001342 3.4e-06 55.1 76 35.5
PSO421G0572 Papaver somniferum HOM05D001521 ORTHO05D001342 3.4e-06 55.1 99 32.3
Cpa.g.sc567.2 Carica papaya HOM05D001521 ORTHO05D001342 5.9e-06 54.3 58 39.7
MELO3C021143.2 Cucumis melo HOM05D001521 ORTHO05D001342 7.7e-06 53.9 86 39.5
FvH4_6g46040 Fragaria vesca HOM05D001521 ORTHO05D001342 7.7e-06 53.9 79 39.2
Gohir.D02G019700 Gossypium hirsutum HOM05D001521 ORTHO05D001342 7.7e-06 53.9 76 39.5
Gorai.005G024800 Gossypium raimondii HOM05D001521 ORTHO05D001342 7.7e-06 53.9 76 39.5


User provided reference genes

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