Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 2.9e-85 318.5 165 100.0
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 1.8e-79 299.3 165 93.9
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 3.5e-78 295.0 165 92.7
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 3.4e-65 251.9 167 80.2
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 8.9e-50 200.7 164 68.9
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 3.4e-49 198.7 154 68.8
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 2.2e-48 196.1 165 65.5
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 6.4e-48 194.5 165 68.5
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 3.2e-47 192.2 165 65.5
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 5.4e-47 191.4 165 66.7
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 9.2e-47 190.7 165 66.1
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 1.6e-46 189.9 168 64.3
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 1.6e-46 189.9 162 66.7
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.0e-45 187.2 164 64.0
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.1e-44 183.7 160 62.5
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 5.6e-44 181.4 162 61.1
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 2.8e-43 179.1 130 71.5
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 3.6e-43 178.7 168 64.3
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 8.1e-43 177.6 149 64.4
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 3.1e-42 175.6 127 71.7
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.0e-42 175.3 120 75.0
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 5.2e-42 174.9 118 75.4
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 6.8e-42 174.5 131 71.8
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 6.8e-42 174.5 163 61.3
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 8.9e-42 174.1 128 68.0
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 8.9e-42 174.1 119 73.1
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.5e-41 173.3 129 69.8
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 2.6e-41 172.6 126 72.2
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 3.4e-41 172.2 118 73.7
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.4e-41 171.8 121 72.7
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 4.4e-41 171.8 130 64.6
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 7.6e-41 171.0 120 68.3
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.7e-40 169.9 113 75.2
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 1.7e-40 169.9 126 71.4
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 2.2e-40 169.5 123 66.7
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 4.9e-40 168.3 119 70.6
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 1.1e-39 167.2 121 71.9
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 1.4e-39 166.8 117 71.8
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.4e-39 166.8 123 65.9
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 4.1e-39 165.2 119 68.1
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 7.1e-39 164.5 122 70.5
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 7.1e-39 164.5 148 62.2
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 9.2e-39 164.1 160 58.1
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.6e-38 163.3 121 68.6
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 2.1e-38 162.9 114 73.7
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 2.7e-38 162.5 121 70.2
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 4.6e-38 161.8 115 73.0
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 6.0e-38 161.4 120 71.7
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 6.0e-38 161.4 164 56.1
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 6.0e-38 161.4 115 72.2
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 6.0e-38 161.4 121 67.8
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 6.0e-38 161.4 136 62.5
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 7.8e-38 161.0 130 63.8
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 1.3e-37 160.2 101 77.2
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 2.3e-37 159.5 126 65.9
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 3.9e-37 158.7 166 55.4
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 5.1e-37 158.3 123 69.1
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 5.1e-37 158.3 123 69.1
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 5.1e-37 158.3 123 69.1
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 5.1e-37 158.3 123 69.1
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 5.1e-37 158.3 123 69.1
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 1.1e-36 157.1 142 61.3
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.9e-36 156.4 137 60.6
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 2.5e-36 156.0 123 67.5
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 3.3e-36 155.6 150 56.7
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 4.3e-36 155.2 113 73.5
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 4.3e-36 155.2 115 72.2
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 7.3e-36 154.5 116 70.7
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 9.6e-36 154.1 163 57.1
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 9.6e-36 154.1 126 62.7
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.1e-35 152.9 116 65.5
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 3.6e-35 152.1 170 51.8
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 1.1e-34 150.6 126 65.9
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 1.2e-33 147.1 164 54.9
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 2.0e-33 146.4 163 56.4
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 1.7e-32 143.3 139 62.6
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 1.1e-31 140.6 95 70.5
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 7.1e-31 137.9 139 59.7
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 3.5e-30 135.6 86 80.2
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 3.5e-30 135.6 102 72.5
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 7.8e-30 134.4 141 52.5
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 3.0e-29 132.5 117 61.5
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 3.9e-29 132.1 113 60.2
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 1.3e-27 127.1 100 66.0
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 8.1e-27 124.4 121 57.0
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 8.1e-27 124.4 102 61.8
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.1e-26 124.0 92 69.6
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 1.4e-26 123.6 117 54.7
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 1.5e-25 120.2 120 56.7
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 4.2e-23 112.1 102 59.8
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 9.3e-23 110.9 71 67.6
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 6.0e-22 108.2 89 59.6
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 1.0e-21 107.5 131 44.3
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 1.5e-20 103.6 121 43.8
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 1.9e-20 103.2 105 52.4
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 3.3e-20 102.4 199 40.2
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 2.4e-18 96.3 135 45.2
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 3.4e-17 92.4 55 80.0
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 4.2e-15 85.5 146 36.3
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 3.5e-14 82.4 130 42.3
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 3.5e-14 82.4 129 38.8
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 1.8e-13 80.1 68 63.2
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 1.5e-12 77.0 120 39.2
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 2.8e-11 72.8 113 44.2
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 5.8e-09 65.1 124 38.7
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 2.7e-06 56.2 80 52.5


User provided reference genes

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