Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 4.4e-228 794.3 399 100.0
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 1.3e-192 676.4 379 90.0
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 4.9e-179 631.3 383 83.8
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 6.5e-147 524.6 382 68.8
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 2.7e-145 519.2 383 67.9
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.7e-145 519.2 383 67.9
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 3.3e-143 512.3 382 68.3
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 5.7e-143 511.5 384 67.2
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.7e-142 508.8 383 67.4
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 4.1e-141 505.4 380 70.5
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 2.2e-139 499.6 384 66.4
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.2e-138 495.7 386 67.1
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 9.4e-138 494.2 385 66.0
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.2e-137 493.8 379 63.3
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 3.6e-137 492.3 379 66.2
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 6.1e-137 491.5 390 67.2
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 8.0e-137 491.1 387 66.1
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.4e-136 490.3 379 63.1
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.8e-136 490.0 379 66.8
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 2.0e-135 486.5 381 64.0
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 4.4e-135 485.3 352 70.7
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 4.4e-135 485.3 388 64.9
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 1.7e-134 483.4 337 69.4
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 5.4e-133 478.4 386 63.5
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 2.0e-132 476.5 386 63.7
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 7.7e-132 474.6 378 64.6
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 6.5e-131 471.5 384 65.1
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 6.5e-131 471.5 379 65.2
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 8.5e-131 471.1 361 67.9
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 7.2e-130 468.0 384 64.1
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.6e-129 466.8 377 65.3
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 3.6e-129 465.7 392 60.2
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.2e-127 460.7 388 62.9
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 3.4e-127 459.1 315 71.4
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 4.4e-127 458.8 399 60.9
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 7.5e-127 458.0 386 60.6
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 1.3e-126 457.2 353 66.6
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.3e-126 457.2 385 61.0
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 1.2e-124 450.7 359 64.6
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.0e-124 449.9 386 60.6
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 6.6e-123 444.9 387 60.7
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 1.1e-122 444.1 368 61.1
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 1.5e-122 443.7 385 60.8
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 4.2e-122 442.2 353 65.4
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 5.6e-122 441.8 386 59.3
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 7.2e-122 441.4 404 58.4
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 1.2e-121 440.7 370 62.4
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 1.4e-120 437.2 374 59.9
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 1.8e-120 436.8 380 59.2
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 3.0e-120 436.0 300 71.0
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 5.2e-120 435.3 358 62.6
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 1.5e-119 433.7 349 62.8
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 2.0e-119 433.3 320 68.8
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 2.6e-119 433.0 379 63.3
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 4.4e-119 432.2 366 58.7
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 5.7e-119 431.8 383 58.2
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 5.7e-119 431.8 318 68.2
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 5.7e-119 431.8 366 58.5
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 9.8e-119 431.0 372 58.9
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 9.8e-119 431.0 366 58.5
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 2.9e-118 429.5 394 59.6
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.1e-117 427.6 300 69.0
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 1.4e-117 427.2 312 67.0
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 4.1e-117 425.6 307 67.4
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 2.0e-116 423.3 383 57.4
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 3.5e-116 422.5 360 59.7
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 7.3e-114 414.8 365 58.1
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 2.8e-113 412.9 358 59.8
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 6.2e-113 411.8 270 70.7
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.8e-112 410.2 366 60.1
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 2.3e-112 409.8 371 58.5
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 4.0e-112 409.1 366 59.8
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 6.8e-112 408.3 365 58.6
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 3.4e-111 406.0 325 63.7
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 9.8e-111 404.4 366 58.5
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 1.7e-110 403.7 372 58.1
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 1.7e-110 403.7 372 58.1
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 1.7e-110 403.7 372 58.1
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 1.9e-109 400.2 366 57.9
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 2.4e-109 399.8 253 73.5
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 2.3e-107 393.3 335 60.6
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 3.9e-107 392.5 279 66.3
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 5.6e-106 388.7 239 76.2
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 3.6e-105 386.0 307 61.6
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 3.6e-105 386.0 351 55.0
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 4.7e-105 385.6 385 51.4
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 6.8e-104 381.7 383 56.1
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 7.5e-103 378.3 302 60.9
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 3.7e-102 375.9 335 55.8
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 4.1e-101 372.5 232 75.9
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 2.5e-98 363.2 365 52.3
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 9.5e-98 361.3 361 52.1
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 4.9e-94 349.0 382 51.8
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 3.2e-93 346.3 250 67.2
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 1.2e-87 327.8 197 78.7
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 9.9e-71 271.6 391 42.7
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 2.9e-70 270.0 382 42.4
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 2.7e-60 236.9 151 72.8
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 8.4e-54 215.3 289 37.7
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 2.8e-49 200.3 274 38.7
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 4.1e-48 196.4 177 55.9
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 2.5e-45 187.2 141 65.2
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 2.5e-45 187.2 141 65.2
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.6e-44 184.5 119 76.5
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 5.7e-42 176.0 308 35.7
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 2.8e-41 173.7 226 47.8
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 2.4e-40 170.6 252 37.3
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 2.1e-36 157.5 199 46.7
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 1.8e-35 154.5 149 54.4
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 6.5e-30 136.0 84 78.6
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 5.2e-27 126.3 117 50.4
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 1.4e-24 118.2 225 33.3
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 1.4e-19 101.7 209 29.7
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 8.3e-09 65.9 211 29.9
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 1.1e-08 65.5 86 48.8
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 3.1e-08 63.9 83 49.4
MELO3C020612.2 Cucumis melo HOM05D006754 ORTHO05D008403 4.1e-08 63.5 33 87.9


User provided reference genes

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