Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G000470 Citrullus lanatus HOM05D039867 ORTHO05D010376 3.9e-117 424.9 224 100.0
MELO3C020524.2 Cucumis melo HOM05D039867 ORTHO05D010376 1.3e-59 233.8 246 58.5
Sed0000970 Sechium edule HOM05D011591 ORTHO05D010376 3.5e-41 172.6 250 48.0
CsaV3_1G036450 Cucumis sativus L. HOM05D039867 ORTHO05D010376 2.4e-34 149.8 136 62.5
QL01p039514 Quercus lobata HOM05D011591 ORTHO05D010376 1.4e-18 97.4 173 39.9
Manes.18G136300 Manihot esculenta HOM05D011591 ORTHO05D010376 2.2e-14 83.6 108 48.1
Potri.009G075000 Populus trichocarpa HOM05D020455 ORTHO05D010376 2.2e-14 83.6 121 43.8
Sabra09G0056900 Salix brachista HOM05D011591 ORTHO05D010376 1.1e-13 81.3 126 42.9
Haze_24379 Corylus avellana HOM05D028161 ORTHO05D010376 4.5e-12 75.9 144 40.3
Hma1.2p1_1974F.1_g309630 Hydrangea macrophylla HOM05D010709 ORTHO05D010376 7.7e-12 75.1 111 39.6
Thecc.09G353600 Theobroma cacao HOM05D020455 ORTHO05D010376 1.1e-10 71.2 169 31.4
FvH4_3g39200 Fragaria vesca HOM05D040535 ORTHO05D010376 1.4e-10 70.9 114 43.0
FAN11G1101 Fragaria x ananassa HOM05D008445 ORTHO05D010376 1.4e-10 70.9 114 43.0
FAN21G0777 Fragaria x ananassa HOM05D002172 ORTHO05D010376 1.4e-10 70.9 114 43.0
Cfa011740 Carpinus fangiana HOM05D028161 ORTHO05D010376 2.5e-10 70.1 96 47.9
Gorai.009G112200 Gossypium raimondii HOM05D020455 ORTHO05D010376 2.1e-09 67.0 159 30.8
CSS0041982 Camellia sinensis var. sinensis HOM05D010709 ORTHO05D010376 7.9e-09 65.1 75 48.0
Gohir.D05G108050 Gossypium hirsutum HOM05D020455 ORTHO05D010376 1.0e-08 64.7 157 30.6
SHI19189 Sapria himalayana HOM05D011591 ORTHO05D010376 1.4e-08 64.3 69 56.5
THA.LOC104810699 Tarenaya hassleriana HOM05D011591 ORTHO05D010376 1.8e-08 63.9 47 70.2
Gohir.A05G107850 Gossypium hirsutum HOM05D020455 ORTHO05D010376 2.6e-07 60.1 162 29.0
Rhsim13G0066500 Rhododendron simsii HOM05D010709 ORTHO05D010376 3.3e-07 59.7 128 37.5
CDE04G2153 Ceratophyllum demersum HOM05D002172 ORTHO05D002167 9.7e-07 58.2 109 33.9
CSS0033974 Camellia sinensis var. sinensis HOM05D010709 ORTHO05D010376 1.3e-06 57.8 114 30.7
arahy.Tifrunner.gnm1.ann1.56J7W4 Arachis hypogaea HOM05D012059 ORTHO05D013484 1.7e-06 57.4 77 45.5
Mapoly0019s0040 Marchantia polymorpha HOM05D001917 ORTHO05D002167 1.7e-06 57.4 92 35.9
Thhalv10014931m.g Eutrema salsugineum HOM05D011591 ORTHO05D010376 3.7e-06 56.2 45 62.2
ATR0602G153 Amborella trichopoda HOM05D002172 ORTHO05D002167 4.8e-06 55.8 93 34.4
PGSC0003DMG400030371 Solanum tuberosum HOM05D010709 ORTHO05D010376 6.3e-06 55.5 63 46.0
C09p69280 Brassica napus HOM05D011591 ORTHO05D010376 8.2e-06 55.1 43 65.1
BolC9t59672H Brassica oleracea HOM05D011591 ORTHO05D010376 8.2e-06 55.1 43 65.1
Pp3c5_20330 Physcomitrium patens HOM05D002172 ORTHO05D002167 8.2e-06 55.1 67 40.3


User provided reference genes

Program Settings