Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 6.6e-242 840.5 490 100.0
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 5.8e-206 721.1 482 82.0
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 1.8e-191 672.9 476 77.5
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 1.8e-146 523.5 473 59.8
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 4.7e-139 498.8 475 57.1
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 1.7e-136 490.3 480 57.3
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 3.2e-135 486.1 473 55.8
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 2.5e-132 476.5 454 57.5
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 2.5e-132 476.5 485 55.7
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 3.3e-132 476.1 473 55.8
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 5.6e-132 475.3 411 61.8
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 9.5e-132 474.6 474 55.5
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 1.2e-131 474.2 473 55.6
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 9.8e-129 464.5 481 53.2
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 1.1e-127 461.1 578 47.6
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.6e-126 457.2 462 54.8
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 7.8e-126 454.9 482 52.5
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.1e-124 451.1 474 53.2
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 9.5e-124 448.0 480 54.2
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 6.2e-123 445.3 474 52.5
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 6.8e-122 441.8 476 52.7
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 1.2e-121 441.0 471 52.4
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 1.7e-120 437.2 462 51.9
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 2.2e-120 436.8 485 50.1
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 4.9e-120 435.6 473 51.4
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 1.6e-118 430.6 473 58.1
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 5.6e-116 422.2 478 50.6
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 7.3e-116 421.8 473 52.2
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 2.8e-115 419.9 483 47.6
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 4.7e-115 419.1 470 49.4
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 6.2e-115 418.7 405 55.3
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 1.4e-114 417.5 486 51.0
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 1.8e-114 417.2 476 49.6
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 4.0e-114 416.0 435 54.0
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 2.0e-113 413.7 485 48.7
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 2.0e-113 413.7 514 47.7
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 1.3e-112 411.0 465 49.5
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 2.2e-112 410.2 473 47.4
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 6.4e-112 408.7 467 49.9
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 6.4e-112 408.7 480 56.0
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 8.4e-112 408.3 406 54.7
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 8.4e-112 408.3 476 50.0
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 9.2e-111 404.8 484 47.1
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 5.1e-109 399.1 473 47.6
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 3.3e-108 396.4 474 48.5
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 3.6e-107 392.9 465 48.6
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 8.1e-107 391.7 470 49.8
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 2.4e-106 390.2 483 53.2
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 2.0e-105 387.1 474 52.7
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 7.6e-105 385.2 628 40.8
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 2.9e-104 383.3 491 47.5
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 1.9e-103 380.6 473 45.2
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 4.2e-103 379.4 474 46.8
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 5.4e-103 379.0 473 43.1
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 9.3e-103 378.3 465 46.7
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 9.3e-103 378.3 472 47.9
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 9.3e-103 378.3 485 44.7
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 1.7e-101 374.0 473 46.3
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 1.7e-101 374.0 464 45.9
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 2.3e-101 373.6 480 45.4
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 2.3e-101 373.6 461 45.8
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 6.6e-101 372.1 452 49.1
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.5e-100 370.9 358 57.0
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 1.3e-99 367.9 489 44.2
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 1.3e-99 367.9 489 44.4
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 1.3e-99 367.9 489 44.2
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 1.6e-99 367.5 476 46.0
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 2.1e-99 367.1 481 45.9
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 2.8e-99 366.7 498 43.0
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 1.1e-98 364.8 494 44.9
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 1.4e-98 364.4 474 45.6
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 9.0e-98 361.7 484 45.5
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 2.6e-97 360.1 339 57.5
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 5.8e-97 359.0 485 43.5
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 5.4e-95 352.4 485 44.7
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 7.1e-95 352.1 473 42.7
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.2e-94 351.3 476 44.3
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 2.7e-94 350.1 474 44.1
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 2.7e-94 350.1 473 43.1
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.0e-93 348.2 496 43.5
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.7e-93 347.4 501 43.3
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 1.7e-93 347.4 478 43.3
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 5.1e-93 345.9 473 42.5
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 6.6e-93 345.5 476 43.5
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 1.1e-92 344.7 265 76.6
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 1.1e-92 344.7 473 42.3
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 2.5e-92 343.6 477 44.0
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 3.3e-92 343.2 473 42.1
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 4.3e-92 342.8 481 42.0
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.3e-92 342.8 474 43.7
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 4.8e-91 339.3 473 49.7
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 1.1e-90 338.2 355 53.2
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 4.0e-90 336.3 476 43.3
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 4.9e-88 329.3 474 42.8
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 4.9e-88 329.3 389 48.1
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 6.4e-88 328.9 452 44.0
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 1.1e-87 328.2 498 39.6
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 1.8e-85 320.9 384 49.7
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 1.8e-85 320.9 483 42.7
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 1.9e-84 317.4 418 45.2
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 3.3e-84 316.6 461 42.7
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 1.0e-80 305.1 466 39.7
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 4.9e-80 302.8 480 42.5
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 3.2e-79 300.1 248 58.9
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 2.1e-78 297.4 287 54.7
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 5.1e-77 292.7 458 43.2
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 4.8e-75 286.2 464 43.3
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 4.1e-74 283.1 483 39.3
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 1.9e-71 274.2 450 38.0
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 1.0e-69 268.5 510 36.1
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 2.3e-69 267.3 460 42.2
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 2.5e-68 263.8 361 43.5
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 3.3e-68 263.5 473 34.7
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 3.4e-65 253.4 647 30.8
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 1.0e-64 251.9 385 50.1
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 3.8e-64 250.0 221 57.9
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 2.3e-61 240.7 254 49.2
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 1.5e-60 238.0 205 56.1
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 3.7e-59 233.4 252 52.0
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 5.9e-57 226.1 462 33.3
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 2.1e-54 217.6 326 43.3
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 2.1e-54 217.6 474 33.5
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 4.8e-51 206.5 462 31.6
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.1e-50 205.3 449 34.3
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 2.6e-44 184.1 239 49.8
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 9.7e-44 182.2 206 43.7
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 1.7e-40 171.4 376 31.9
Atru.chr4.610 Acer truncatum HOM05D004546 ORTHO05D005419 2.1e-38 164.5 204 41.7
TPR.G37878 Trifolium pratense HOM05D004546 ORTHO05D005419 2.6e-36 157.5 160 52.5
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 2.8e-35 154.1 474 28.7
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.8e-35 153.3 461 29.5
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 2.5e-31 141.0 207 44.4
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 2.7e-30 137.5 446 25.8
MD08G1232500 Malus domestica HOM05D004546 ORTHO05D005419 6.8e-29 132.9 99 59.6
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 2.8e-27 127.5 250 32.8
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 1.1e-26 125.6 425 27.8
TPR.G37996 Trifolium pratense HOM05D004546 ORTHO05D005419 4.1e-26 123.6 183 41.5
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.3e-24 118.6 101 56.4
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 5.6e-23 113.2 100 56.0
CAN.G1882.3 Capsicum annuum HOM05D004546 ORTHO05D005419 9.5e-23 112.5 82 73.2
TPR.G7268 Trifolium pratense HOM05D004546 ORTHO05D005419 1.7e-19 101.7 74 70.3
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 2.2e-19 101.3 151 40.4
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 3.7e-19 100.5 112 52.7
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 4.9e-19 100.1 138 43.5
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 7.0e-18 96.3 448 26.1
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 4.6e-17 93.6 150 36.0
TPR.G18400 Trifolium pratense HOM05D004546 ORTHO05D005419 5.6e-15 86.7 66 69.7
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 9.5e-15 85.9 109 47.7
MCO07G624 Micromonas commoda HOM05D004546 ORTHO05D005419 1.3e-08 65.5 155 27.1
MBI17_g42496_MAGBIO Magnolia biondii HOM05D004546 ORTHO05D005419 5.0e-08 63.5 78 34.6
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-07 62.4 43 69.8
COL.COLO4_15711 Corchorus olitorius HOM05D004546 ORTHO05D005419 1.5e-07 62.0 66 50.0
Cre01.g008450 Chlamydomonas reinhardtii HOM05D004546 ORTHO05D005419 9.5e-07 59.3 184 28.3
PRCOL_00002550 Prasinoderma coloniale HOM05D004546 ORTHO05D005419 1.2e-06 58.9 182 25.8
SMO118G0303 Selaginella moellendorffii HOM05D044143 ORTHO05D050877 3.6e-06 57.4 267 24.7
Pp3c12_6220 Physcomitrium patens HOM05D004546 ORTHO05D005419 4.7e-06 57.0 474 20.0


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