Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 6.3e-70 267.3 134 100.0
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 8.5e-51 203.8 112 91.1
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 2.6e-47 192.2 106 90.6
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 4.5e-44 181.4 106 84.0
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 8.0e-41 170.6 109 76.1
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 5.2e-40 167.9 110 77.3
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 1.2e-39 166.8 110 77.3
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 1.2e-39 166.8 109 75.2
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 3.4e-39 165.2 108 74.1
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 4.4e-39 164.9 108 74.1
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 9.8e-39 163.7 101 77.2
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.7e-38 162.9 110 75.5
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 1.7e-38 162.9 110 74.5
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 1.7e-38 162.9 108 74.1
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 3.7e-38 161.8 108 71.3
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 3.7e-38 161.8 111 73.9
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 8.3e-38 160.6 110 72.7
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.4e-37 159.8 109 71.6
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.8e-37 159.5 93 83.9
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 1.8e-37 159.5 97 78.4
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 2.4e-37 159.1 96 80.2
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 2.4e-37 159.1 94 79.8
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 3.2e-37 158.7 97 78.4
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 3.2e-37 158.7 109 71.6
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 3.2e-37 158.7 94 80.9
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 5.4e-37 157.9 108 71.3
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 7.0e-37 157.5 97 79.4
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 7.0e-37 157.5 95 80.0
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.2e-36 156.8 96 78.1
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 1.2e-36 156.8 108 71.3
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.6e-36 156.4 96 80.2
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 1.6e-36 156.4 96 81.2
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.6e-36 156.4 96 79.2
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.0e-36 156.0 97 77.3
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 2.7e-36 155.6 96 78.1
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 3.5e-36 155.2 97 76.3
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 3.5e-36 155.2 95 80.0
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 3.5e-36 155.2 95 80.0
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.6e-36 154.8 103 72.8
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 4.6e-36 154.8 107 71.0
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 7.8e-36 154.1 94 75.5
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 1.0e-35 153.7 96 77.1
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 1.3e-35 153.3 95 78.9
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 1.3e-35 153.3 96 76.0
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 1.7e-35 152.9 94 75.5
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 3.9e-35 151.8 96 76.0
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 3.9e-35 151.8 102 69.6
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 5.0e-35 151.4 96 75.0
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 6.6e-35 151.0 108 67.6
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 8.6e-35 150.6 96 76.0
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 1.1e-34 150.2 97 76.3
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 1.5e-34 149.8 111 69.4
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 1.5e-34 149.8 101 72.3
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 3.3e-34 148.7 100 72.0
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 5.6e-34 147.9 96 76.0
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 5.6e-34 147.9 100 71.0
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 7.3e-34 147.5 101 71.3
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 7.3e-34 147.5 94 76.6
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.2e-33 146.7 110 69.1
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.2e-33 146.7 110 69.1
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.6e-33 146.4 101 71.3
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 2.1e-33 146.0 94 76.6
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 2.1e-33 146.0 96 72.9
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.1e-33 146.0 89 80.9
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 2.8e-33 145.6 96 71.9
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 3.6e-33 145.2 110 68.2
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 3.6e-33 145.2 102 64.7
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 6.2e-33 144.4 96 71.9
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 8.0e-33 144.1 113 66.4
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 8.0e-33 144.1 96 72.9
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 8.0e-33 144.1 96 72.9
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 8.0e-33 144.1 110 68.2
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 8.0e-33 144.1 110 68.2
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 1.0e-32 143.7 110 68.2
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 1.0e-32 143.7 97 72.2
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.0e-32 143.7 110 67.3
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 1.4e-32 143.3 110 67.3
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 1.8e-32 142.9 101 69.3
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 2.3e-32 142.5 94 74.5
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 2.3e-32 142.5 94 74.5
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 2.3e-32 142.5 94 74.5
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 3.1e-32 142.1 94 74.5
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 3.1e-32 142.1 96 71.9
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 3.1e-32 142.1 97 69.1
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 4.0e-32 141.7 92 73.9
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 5.2e-32 141.4 90 76.7
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 6.8e-32 141.0 96 71.9
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 8.9e-32 140.6 94 73.4
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 2.0e-31 139.4 108 61.1
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 4.4e-31 138.3 93 69.9
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 9.8e-31 137.1 93 69.9
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.9e-30 135.6 83 79.5
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 3.7e-30 135.2 100 65.0
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.9e-30 134.8 167 46.7
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 1.0e-27 127.1 100 65.0
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 3.0e-27 125.6 94 69.1
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 1.9e-26 122.9 96 66.7
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 2.5e-26 122.5 81 76.5
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.7e-19 99.8 74 59.5
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 8.6e-19 97.4 67 70.1
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 5.6e-18 94.7 67 68.7
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 1.1e-16 90.5 86 46.5
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 4.9e-14 81.6 90 42.2
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 6.0e-12 74.7 94 39.4


User provided reference genes

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