Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G024390 Citrullus lanatus HOM05D004137 ORTHO05D004804 6.7e-73 277.3 147 100.0
Sed0012847 Sechium edule HOM05D004137 ORTHO05D004804 3.5e-21 105.5 76 80.3
CANSAT11G0501 Cannabis sativa HOM05D004137 ORTHO05D004804 3.7e-15 85.5 60 70.0
QL01p003617 Quercus lobata HOM05D004137 ORTHO05D004804 7.0e-14 81.3 60 71.7
CiPaw.13G177400 Carya illinoinensis HOM05D004137 ORTHO05D004804 1.6e-13 80.1 60 68.3
Haze_22939 Corylus avellana HOM05D004137 ORTHO05D004804 2.7e-13 79.3 60 70.0
Prupe.6G003100 Prunus persica HOM05D004137 ORTHO05D004804 4.5e-13 78.6 60 66.7
MD03G1003400 Malus domestica HOM05D004137 ORTHO05D004804 1.0e-12 77.4 60 65.0
Potri.001G003500 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.0e-12 77.4 62 69.4
ATR0737G017 Amborella trichopoda HOM05D004137 ORTHO05D004804 1.3e-12 77.0 86 54.7
MD11G1003200 Malus domestica HOM05D004137 ORTHO05D004804 1.3e-12 77.0 60 66.7
Manes.15G109500 Manihot esculenta HOM05D004137 ORTHO05D004804 5.0e-12 75.1 62 67.7
CSS0017288 Camellia sinensis var. sinensis HOM05D004137 ORTHO05D004804 6.6e-12 74.7 60 61.7
Cpa.g.c44905 Carica papaya HOM05D004137 ORTHO05D004804 8.6e-12 74.3 62 67.7
FvH4_3g45760 Fragaria vesca HOM05D004137 ORTHO05D004804 1.1e-11 73.9 60 65.0
FAN16G1350 Fragaria x ananassa HOM05D004137 ORTHO05D004804 1.1e-11 73.9 60 65.0
FAN21G2465 Fragaria x ananassa HOM05D004137 ORTHO05D004804 1.1e-11 73.9 60 65.0
RcHm_v2.0_Chr5g0083831 Rosa chinensis HOM05D004137 ORTHO05D004804 1.1e-11 73.9 60 65.0
FAN11G0915 Fragaria x ananassa HOM05D004137 ORTHO05D004804 2.5e-11 72.8 60 63.3
FAN25G2990 Fragaria x ananassa HOM05D004137 ORTHO05D004804 5.6e-11 71.6 60 63.3
Nn7g35858 Nelumbo nucifera HOM05D004137 ORTHO05D004804 5.6e-11 71.6 74 54.1
CAN.G960.46 Capsicum annuum HOM05D004137 ORTHO05D004804 9.5e-11 70.9 60 60.0
TWI60G1175 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 9.5e-11 70.9 62 64.5
Manes.03G087303 Manihot esculenta HOM05D004137 ORTHO05D004804 1.6e-10 70.1 62 62.9
TAR623G1005 Trochodendron aralioides HOM05D004137 ORTHO05D004804 2.1e-10 69.7 60 61.7
Solyc10g078570.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 3.6e-10 68.9 60 58.3
PGSC0003DMG400008382 Solanum tuberosum HOM05D004137 ORTHO05D004804 3.6e-10 68.9 60 58.3
TWI34G1879 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 3.6e-10 68.9 61 62.3
Lsat_1_v5_gn_1_59720 Lactuca sativa HOM05D004137 ORTHO05D004804 4.7e-10 68.6 79 46.8
Migut.J01885 Erythranthe guttata HOM05D004137 ORTHO05D004804 6.1e-10 68.2 58 62.1
Potri.003G221500 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.0e-09 67.4 62 61.3
Nn2g15861 Nelumbo nucifera HOM05D004137 ORTHO05D004804 1.4e-09 67.0 60 60.0
Lsat_1_v5_gn_1_68820 Lactuca sativa HOM05D004137 ORTHO05D004804 3.1e-09 65.9 60 55.0
Manes.09G141000 Manihot esculenta HOM05D004137 ORTHO05D004804 8.9e-09 64.3 58 56.9
Manes.08G144511 Manihot esculenta HOM05D004137 ORTHO05D004804 1.2e-08 63.9 58 56.9
HanXRQChr01g0021421 Helianthus annuus HOM05D004137 ORTHO05D004804 1.5e-08 63.5 60 51.7
Hma1.2p1_0241F.1_g100550 Hydrangea macrophylla HOM05D004137 ORTHO05D004804 1.5e-08 63.5 62 54.8
Cc06_g23020 Coffea canephora HOM05D004137 ORTHO05D004804 2.0e-08 63.2 60 53.3
Ciclev10017215m.g Citrus clementina HOM05D004137 ORTHO05D004804 2.6e-08 62.8 62 54.8
CARHR233900 Cardamine hirsuta HOM05D004137 ORTHO05D004804 4.4e-08 62.0 62 54.8
ECA248G0157 Erigeron canadensis HOM05D004137 ORTHO05D004804 4.4e-08 62.0 60 48.3
DCAR_023854 Daucus carota HOM05D004137 ORTHO05D004804 5.8e-08 61.6 60 51.7
Lsat_1_v5_gn_2_50221 Lactuca sativa HOM05D004137 ORTHO05D004804 5.8e-08 61.6 60 53.3
Nitab4.5_0000528g0100 Nicotiana tabacum HOM05D004137 ORTHO05D004804 9.8e-08 60.8 60 51.7
Nitab4.5_0005935g0010 Nicotiana tabacum HOM05D004137 ORTHO05D004804 9.8e-08 60.8 60 51.7
QL04p040762 Quercus lobata HOM05D004137 ORTHO05D004804 1.3e-07 60.5 49 65.3
HanXRQChr02g0057501 Helianthus annuus HOM05D004137 ORTHO05D004804 1.7e-07 60.1 60 48.3
Ah.13g075420 Amaranthus hybridus HOM05D004137 ORTHO05D004804 2.9e-07 59.3 60 53.3
Potri.013G057832 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.1e-06 57.4 77 42.9
Aa31LG3G12400 Aethionema arabicum HOM05D004137 ORTHO05D004804 1.4e-06 57.0 62 50.0
Carub.0007s1461 Capsella rubella HOM05D004137 ORTHO05D004804 1.4e-06 57.0 62 51.6
Migut.N00553 Erythranthe guttata HOM05D004137 ORTHO05D004804 1.4e-06 57.0 59 49.2
Sp7g24280 Schrenkiella parvula HOM05D004137 ORTHO05D004804 1.4e-06 57.0 62 51.6
AL7G26620 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 1.9e-06 56.6 62 51.6
BcaC01g01518 Brassica carinata HOM05D004137 ORTHO05D004804 1.9e-06 56.6 84 39.3
Eucgr.B03601 Eucalyptus grandis HOM05D004137 ORTHO05D004804 1.9e-06 56.6 62 51.6
Solyc11g042440.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 1.9e-06 56.6 60 48.3
PGSC0003DMG400037247 Solanum tuberosum HOM05D004137 ORTHO05D004804 1.9e-06 56.6 60 48.3
BolC3t21580H Brassica oleracea HOM05D004137 ORTHO05D004804 2.4e-06 56.2 84 39.3
Sopen11g018520 Solanum pennellii HOM05D004137 ORTHO05D004804 2.4e-06 56.2 60 48.3
THA.LOC104811721 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 3.2e-06 55.8 62 48.4
AL1G63420 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 5.4e-06 55.1 62 48.4
vmacro20990 Vaccinium macrocarpon HOM05D004137 ORTHO05D004804 5.4e-06 55.1 86 44.2
MELO3C026884.2 Cucumis melo HOM05D004137 ORTHO05D004804 7.0e-06 54.7 60 46.7
BcaB04g16959 Brassica carinata HOM05D004137 ORTHO05D004804 9.2e-06 54.3 62 45.2
C03p92680 Brassica napus HOM05D004137 ORTHO05D004804 9.2e-06 54.3 84 38.1
Thhalv10027319m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 9.2e-06 54.3 62 50.0
Glyma.08G125200 Glycine max HOM05D004137 ORTHO05D004804 9.2e-06 54.3 74 48.6
Gohir.A12G175500 Gossypium hirsutum HOM05D004137 ORTHO05D004804 9.2e-06 54.3 58 46.6
Lalb_Chr07g0185901 Lupinus albus HOM05D004137 ORTHO05D004804 9.2e-06 54.3 79 39.2
Lalb_Chr13g0295561 Lupinus albus HOM05D004137 ORTHO05D004804 9.2e-06 54.3 88 42.0
Potri.013G057766 Populus trichocarpa HOM05D004137 ORTHO05D004804 9.2e-06 54.3 77 41.6


User provided reference genes

Program Settings