Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G022880 Citrullus lanatus HOM05D004084 ORTHO05D004662 1.0e-179 633.3 316 100.0
MELO3C014562.2 Cucumis melo HOM05D004084 ORTHO05D004662 4.0e-107 392.1 280 75.4
CsaV3_6G039010 Cucumis sativus L. HOM05D004084 ORTHO05D004662 4.7e-100 368.6 280 72.5
Sed0020433 Sechium edule HOM05D004084 ORTHO05D004662 1.2e-95 354.0 249 77.1
Manes.02G139800 Manihot esculenta HOM05D004084 ORTHO05D004662 2.5e-85 319.7 245 67.8
Cfa009849 Carpinus fangiana HOM05D004084 ORTHO05D004662 1.4e-83 313.9 246 65.9
Thecc.09G249200 Theobroma cacao HOM05D004084 ORTHO05D004662 1.2e-82 310.8 246 67.1
Atru.chr3.2757 Acer truncatum HOM05D004084 ORTHO05D004662 2.6e-82 309.7 246 64.6
Ciclev10016417m.g Citrus clementina HOM05D004084 ORTHO05D004662 2.6e-82 309.7 246 66.3
CANSAT54G0855 Cannabis sativa HOM05D004084 ORTHO05D004662 3.4e-82 309.3 237 67.1
Atru.chr4.1902 Acer truncatum HOM05D004084 ORTHO05D004662 4.4e-82 308.9 222 70.7
CiPaw.14G113600 Carya illinoinensis HOM05D004084 ORTHO05D004662 3.8e-81 305.8 250 65.6
Potri.001G275900 Populus trichocarpa HOM05D004084 ORTHO05D004662 3.2e-80 302.8 226 67.7
FAN21G2250 Fragaria x ananassa HOM05D004084 ORTHO05D004662 4.6e-79 298.9 236 65.3
Potri.009G070600 Populus trichocarpa HOM05D004084 ORTHO05D004662 1.3e-78 297.4 227 68.3
VMungo0540G1882 Vigna mungo HOM05D004084 ORTHO05D004662 1.5e-77 293.9 240 64.6
TWI79G0099 Tripterygium wilfordii HOM05D004084 ORTHO05D004662 3.3e-77 292.7 217 68.2
MD11G1185700 Malus domestica HOM05D004084 ORTHO05D004662 5.6e-77 292.0 224 68.3
Prupe.4G267100 Prunus persica HOM05D004084 ORTHO05D004662 5.6e-77 292.0 240 65.8
Dinv05100 Davidia involucrata HOM05D004084 ORTHO05D004662 7.3e-77 291.6 215 70.7
GSVIVG01037269001 Vitis vinifera HOM05D004084 ORTHO05D004662 7.3e-77 291.6 239 61.9
FvH4_3g27900 Fragaria vesca HOM05D004084 ORTHO05D004662 9.6e-77 291.2 236 64.8
FAN16G3201 Fragaria x ananassa HOM05D004084 ORTHO05D004662 2.1e-76 290.0 236 64.4
Dinv36171 Davidia involucrata HOM05D004084 ORTHO05D004662 2.8e-76 289.7 255 62.7
Rhsim13G0210600 Rhododendron simsii HOM05D004084 ORTHO05D004662 2.8e-76 289.7 239 63.2
Glyma.20G037400 Glycine max HOM05D004084 ORTHO05D004662 4.8e-76 288.9 254 63.4
Gohir.A13G219100 Gossypium hirsutum HOM05D004084 ORTHO05D004662 6.2e-76 288.5 241 63.1
RcHm_v2.0_Chr5g0050631 Rosa chinensis HOM05D004084 ORTHO05D004662 8.1e-76 288.1 209 70.3
FAN25G0474 Fragaria x ananassa HOM05D004084 ORTHO05D004662 1.1e-75 287.7 236 64.0
TWI75G0849 Tripterygium wilfordii HOM05D004084 ORTHO05D004662 4.0e-75 285.8 264 59.1
Gorai.013G253900 Gossypium raimondii HOM05D004084 ORTHO05D004662 5.3e-75 285.4 248 61.7
Gohir.D13G222800 Gossypium hirsutum HOM05D004084 ORTHO05D004662 9.0e-75 284.6 248 61.7
TAR623G1229 Trochodendron aralioides HOM05D004084 ORTHO05D004662 1.2e-74 284.3 208 70.7
MSTRG.21348 Avicennia marina HOM05D004084 ORTHO05D004662 2.6e-74 283.1 208 69.2
Phvul.006G030700 Phaseolus vulgaris HOM05D004084 ORTHO05D004662 3.4e-74 282.7 241 63.9
PGSC0003DMG400009461 Solanum tuberosum HOM05D004084 ORTHO05D004662 5.8e-74 282.0 246 62.6
Cc08_g06320 Coffea canephora HOM05D004084 ORTHO05D004662 2.2e-73 280.0 273 56.8
Duzib150G1594 Durio zibethinus HOM05D004084 ORTHO05D004662 2.9e-73 279.6 248 61.7
Nitab4.5_0012538g0010 Nicotiana tabacum HOM05D004084 ORTHO05D004662 4.9e-73 278.9 248 61.3
Solyc11g064830.2 Solanum lycopersicum HOM05D004084 ORTHO05D004662 4.9e-73 278.9 246 62.6
Sopen11g024490 Solanum pennellii HOM05D004084 ORTHO05D004662 6.4e-73 278.5 246 62.2
Duzib168G1105 Durio zibethinus HOM05D004084 ORTHO05D004662 1.1e-72 277.7 246 62.2
Glyma.07G230600 Glycine max HOM05D004084 ORTHO05D004662 4.2e-72 275.8 254 61.8
Nitab4.5_0000718g0220 Nicotiana tabacum HOM05D004084 ORTHO05D004662 7.1e-72 275.0 248 61.3
Hma1.2p1_0129F.1_g060160 Hydrangea macrophylla HOM05D004084 ORTHO05D004662 1.2e-71 274.2 208 69.7
MSTRG.17633 Avicennia marina HOM05D004084 ORTHO05D004662 2.1e-71 273.5 249 58.6
HanXRQChr14g0432231 Helianthus annuus HOM05D004084 ORTHO05D004662 4.6e-71 272.3 248 61.3
MSTRG.17516 Avicennia marina HOM05D004084 ORTHO05D004662 2.3e-70 270.0 207 66.7
Nitab4.5_0001500g0060 Nicotiana tabacum HOM05D001938 ORTHO05D004662 2.3e-70 270.0 202 68.8
Psat5g181240 Pisum sativum HOM05D004084 ORTHO05D004662 2.3e-70 270.0 232 62.9
Ca_03985_v3 Cicer arietinum L. HOM05D004084 ORTHO05D004662 3.0e-70 269.6 256 62.1
Eucgr.B03731 Eucalyptus grandis HOM05D004084 ORTHO05D004662 3.0e-70 269.6 213 69.0
Os01g0954400 Oryza sativa ssp. japonica HOM05D004084 ORTHO05D004662 8.7e-70 268.1 231 62.8
Gohir.A09G110200 Gossypium hirsutum HOM05D004084 ORTHO05D004662 1.1e-69 267.7 249 61.0
Gohir.D09G106500 Gossypium hirsutum HOM05D004084 ORTHO05D004662 1.5e-69 267.3 249 60.6
SGA_v2.0_scaffold29G12252 Striga asiatica HOM05D004084 ORTHO05D004662 1.5e-69 267.3 260 58.5
Gorai.006G124000 Gossypium raimondii HOM05D004084 ORTHO05D004662 1.9e-69 266.9 249 60.2
PGSC0003DMG400022698 Solanum tuberosum HOM05D004084 ORTHO05D004662 2.5e-69 266.5 245 59.6
Peaxi162Scf00004g04520 Petunia axillaris HOM05D004084 ORTHO05D004662 4.3e-69 265.8 250 58.8
Lj1A284G15 Lonicera japonica HOM05D004084 ORTHO05D004662 7.4e-69 265.0 215 65.6
Nitab4.5_0000730g0060 Nicotiana tabacum HOM05D001938 ORTHO05D004662 9.6e-69 264.6 240 60.0
EL10Ac4g10147 Beta vulgaris HOM05D004084 ORTHO05D004662 1.3e-68 264.2 271 53.9
MBI13_g27798_MAGBIO Magnolia biondii HOM05D004084 ORTHO05D004662 1.3e-68 264.2 203 67.5
ECA238G4029 Erigeron canadensis HOM05D004084 ORTHO05D004662 5.3e-67 258.8 238 60.1
Oeu025904.1 Olea europaea HOM05D004084 ORTHO05D004662 1.2e-66 257.7 237 59.5
Ah.04g161980 Amaranthus hybridus HOM05D004084 ORTHO05D004662 2.0e-66 256.9 270 53.7
PGR119G1682 Punica granatum HOM05D004084 ORTHO05D004662 3.4e-66 256.1 208 63.9
PGR123G0005 Punica granatum HOM05D004084 ORTHO05D004662 3.4e-66 256.1 208 63.9
Solyc01g008810.3 Solanum lycopersicum HOM05D004084 ORTHO05D004662 3.4e-66 256.1 245 59.2
arahy.Tifrunner.gnm1.ann1.X3DJVQ Arachis hypogaea HOM05D004084 ORTHO05D004662 7.6e-66 255.0 244 60.2
Sopen01g004320 Solanum pennellii HOM05D004084 ORTHO05D004662 7.6e-66 255.0 245 59.2
Actinidia06961 Actinidia chinensis HOM05D004084 ORTHO05D004662 2.2e-65 253.4 208 65.9
HanXRQChr06g0182501 Helianthus annuus HOM05D004084 ORTHO05D004662 2.2e-65 253.4 225 62.2
Aa31LG3G14920 Aethionema arabicum HOM05D004084 ORTHO05D004662 2.9e-65 253.1 233 61.4
Oeu016695.1 Olea europaea HOM05D004084 ORTHO05D004662 3.8e-65 252.7 215 60.5
ATR0680G173 Amborella trichopoda HOM05D004084 ORTHO05D004662 8.4e-65 251.5 206 64.1
Thhalv10014482m.g Eutrema salsugineum HOM05D004084 ORTHO05D004662 1.4e-64 250.8 231 60.2
Sp6g31330 Schrenkiella parvula HOM05D004084 ORTHO05D004662 3.2e-64 249.6 253 55.7
Lalb_Chr10g0106291 Lupinus albus HOM05D004084 ORTHO05D004662 1.6e-63 247.3 292 50.7
Sp6g24980 Schrenkiella parvula HOM05D004084 ORTHO05D004662 2.7e-63 246.5 261 53.3
Zm00001eb140640 Zea mays HOM05D004084 ORTHO05D004662 2.7e-63 246.5 254 54.3
Migut.N02373 Erythranthe guttata HOM05D004084 ORTHO05D004662 7.9e-63 245.0 209 64.1
Hund07438 Selenicereus undatus HOM05D004084 ORTHO05D004662 7.9e-63 245.0 243 54.7
Haze_23226 Corylus avellana HOM05D004084 ORTHO05D004662 1.8e-62 243.8 179 70.9
AT5G19430 Arabidopsis thaliana HOM05D004084 ORTHO05D004662 1.9e-61 240.4 247 54.7
PGR102G0788 Punica granatum HOM05D004084 ORTHO05D004662 1.9e-61 240.4 246 57.3
Sc06g0004680 Simmondsia chinensis HOM05D004084 ORTHO05D004662 1.9e-61 240.4 215 59.5
MBI19_g16738_MAGBIO Magnolia biondii HOM05D004084 ORTHO05D004662 4.3e-61 239.2 205 60.5
THA.LOC104824623 Tarenaya hassleriana HOM05D004084 ORTHO05D004662 7.4e-61 238.4 258 54.3
PSO339G4433 Papaver somniferum HOM05D004084 ORTHO05D004662 9.6e-61 238.0 206 59.7
QL01p017232 Quercus lobata HOM05D004084 ORTHO05D004662 1.3e-60 237.7 177 69.5
Peaxi162Scf00032g02420 Petunia axillaris HOM05D004084 ORTHO05D004662 1.6e-60 237.3 240 58.3
Lsat_1_v5_gn_2_32240 Lactuca sativa HOM05D004084 ORTHO05D004662 4.1e-59 232.6 227 57.3
CARHR200800 Cardamine hirsuta HOM05D004084 ORTHO05D004662 9.0e-59 231.5 239 55.2
BraA03t10266Z Brassica rapa HOM05D004084 ORTHO05D004662 1.2e-58 231.1 260 51.5
Lj6g0014777 Lotus japonicus HOM05D004084 ORTHO05D004662 1.2e-58 231.1 259 53.7
C03p11060 Brassica napus HOM05D004084 ORTHO05D004662 7.6e-58 228.4 260 51.5
BolC3t13575H Brassica oleracea HOM05D004084 ORTHO05D004662 7.6e-58 228.4 260 51.5
BcaB01g05145 Brassica carinata HOM05D004084 ORTHO05D004662 1.0e-57 228.0 260 51.5
DCAR_023764 Daucus carota HOM05D000857 ORTHO05D004662 1.7e-57 227.3 179 67.0
A03p09480 Brassica napus HOM05D004084 ORTHO05D004662 2.2e-57 226.9 260 51.2
COL.COLO4_35673 Corchorus olitorius HOM05D004084 ORTHO05D004662 2.2e-57 226.9 178 69.7
AT5G12310 Arabidopsis thaliana HOM05D004084 ORTHO05D004662 2.9e-57 226.5 219 56.6
Carub.0006s1777 Capsella rubella HOM05D004084 ORTHO05D004662 2.9e-57 226.5 245 51.8
Carub.0006s1082 Capsella rubella HOM05D004084 ORTHO05D004662 3.8e-57 226.1 218 56.9
Migut.D00657 Erythranthe guttata HOM05D004084 ORTHO05D004662 8.4e-57 224.9 211 60.7
unitig_8.g3650 Utricularia gibba HOM05D004084 ORTHO05D000654 4.2e-56 222.6 223 57.0
arahy.Tifrunner.gnm1.ann1.6L2V6B Arachis hypogaea HOM05D004084 ORTHO05D004662 2.7e-55 219.9 254 52.8
BolC9t59292H Brassica oleracea HOM05D004084 ORTHO05D004662 1.8e-54 217.2 260 50.4
SGA_v2.0_scaffold310G48197 Striga asiatica HOM05D004084 ORTHO05D004662 8.7e-54 214.9 214 58.4
Sabra09G0053400 Salix brachista HOM05D004084 ORTHO05D004662 1.1e-53 214.5 232 52.6
BraA10t44615Z Brassica rapa HOM05D004084 ORTHO05D004662 9.7e-53 211.5 260 50.8
C09p64590 Brassica napus HOM05D004084 ORTHO05D004662 1.3e-52 211.1 259 49.8
SGA_v2.0_scaffold8G04547 Striga asiatica HOM05D001938 ORTHO05D001965 1.6e-52 210.7 207 58.5
Thhalv10014461m.g Eutrema salsugineum HOM05D004084 ORTHO05D004662 2.8e-52 209.9 258 46.1
BolC3t13153H Brassica oleracea HOM05D004084 ORTHO05D004662 4.8e-52 209.1 180 58.3
BcaNung06777 Brassica carinata HOM05D004084 ORTHO05D004662 3.1e-51 206.5 259 47.1
PSO384G1598 Papaver somniferum HOM05D004084 ORTHO05D004662 3.1e-51 206.5 209 56.0
A03p05580 Brassica napus HOM05D004084 ORTHO05D004662 6.9e-51 205.3 255 49.0
Hund21983 Selenicereus undatus HOM05D004084 ORTHO05D004662 1.5e-50 204.1 193 57.0
A10p25510 Brassica napus HOM05D004084 ORTHO05D004662 2.6e-50 203.4 239 51.5
C03p06530 Brassica napus HOM05D004084 ORTHO05D004662 5.9e-50 202.2 256 46.9
AL6G30920 Arabidopsis lyrata HOM05D004084 ORTHO05D004662 2.9e-49 199.9 199 57.3
BraA03t09895Z Brassica rapa HOM05D004084 ORTHO05D004662 2.5e-48 196.8 167 58.1
SEGI_38021 Sequoiadendron giganteum HOM05D004084 ORTHO05D004662 3.6e-47 193.0 182 59.3
Pp3c26_14330 Physcomitrium patens HOM05D004084 ORTHO05D004662 2.3e-46 190.3 244 47.1
CARHR193510 Cardamine hirsuta HOM05D004084 ORTHO05D004662 4.3e-45 186.0 200 55.5
CDE11G0877 Ceratophyllum demersum HOM05D004084 ORTHO05D004662 5.7e-45 185.7 178 54.5
SEGI_32483 Sequoiadendron giganteum HOM05D004084 ORTHO05D004662 7.4e-45 185.3 176 54.5
HPP92_006725 Vanilla planifolia HOM05D004084 ORTHO05D004662 9.7e-45 184.9 147 61.2
Nn7g36697 Nelumbo nucifera HOM05D004084 ORTHO05D004662 1.3e-44 184.5 141 65.2
AagrBONN_evm.TU.Sc2ySwM_228.3727 Anthoceros agrestis HOM05D004084 ORTHO05D004662 5.3e-43 179.1 150 58.0
SMO337G0017 Selaginella moellendorffii HOM05D004084 ORTHO05D004662 6.9e-43 178.7 236 45.3
MD03G1166600 Malus domestica HOM05D004084 ORTHO05D004662 1.0e-41 174.9 140 69.3
CBR_g131 Chara braunii HOM05D004084 ORTHO05D004662 2.9e-41 173.3 204 47.5
BcaB01g04862 Brassica carinata HOM05D004084 ORTHO05D004662 5.0e-41 172.6 260 41.5
Actinidia16378 Actinidia chinensis HOM05D004084 ORTHO05D004662 3.9e-38 162.9 111 64.9
CSS0029213 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 2.0e-37 160.6 144 68.1
AUR62000187 Chenopodium quinoa HOM05D004084 ORTHO05D004662 1.4e-35 154.5 159 58.5
Phvul.006G030800 Phaseolus vulgaris HOM05D004084 ORTHO05D004662 1.4e-35 154.5 136 66.2
Oeu061709.1 Olea europaea HOM05D004084 ORTHO05D004662 3.1e-35 153.3 143 63.6
CDE11G0903 Ceratophyllum demersum HOM05D004084 ORTHO05D004662 4.5e-34 149.4 148 50.7
CDE11G0350 Ceratophyllum demersum HOM05D004084 ORTHO05D004662 2.2e-33 147.1 122 58.2
Sabra16G0170200 Salix brachista HOM05D004084 ORTHO05D004662 1.0e-30 138.3 153 54.2
Cre13.g604750 Chlamydomonas reinhardtii HOM05D004084 ORTHO05D004662 5.7e-29 132.5 164 45.7
MD03G1166700 Malus domestica HOM05D004084 ORTHO05D004662 1.7e-28 131.0 80 71.2
arahy.Tifrunner.gnm1.ann1.QA9X4A Arachis hypogaea HOM05D004084 ORTHO05D004662 2.2e-28 130.6 150 57.3
TPR.G27271 Trifolium pratense HOM05D004084 ORTHO05D004662 6.3e-28 129.0 134 62.7
CSS0040984 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 1.1e-27 128.3 145 58.6
CSS0038115 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 5.3e-27 125.9 82 70.7
BcaB01g05406 Brassica carinata HOM05D004084 ORTHO05D004662 3.2e-24 116.7 256 37.1
Cc00_g22040 Coffea canephora HOM05D004084 ORTHO05D004662 9.4e-24 115.2 102 53.9
AL6G23110 Arabidopsis lyrata HOM05D004084 ORTHO05D004662 2.7e-23 113.6 149 51.7
Aqoxy2G00377 Aquilegia oxysepala HOM05D004084 ORTHO05D004662 4.7e-23 112.8 244 34.0
PRCOL_00000691 Prasinoderma coloniale HOM05D004084 ORTHO05D004662 2.0e-21 107.5 160 38.8
EL10Ac8g18304 Beta vulgaris HOM05D004084 ORTHO05D004662 5.7e-21 105.9 94 52.1
EL10Ac8g18303 Beta vulgaris HOM05D004084 ORTHO05D004662 9.8e-21 105.1 119 42.0
AUR62006538 Chenopodium quinoa HOM05D001938 ORTHO05D001965 1.7e-20 104.4 98 64.3
Sed0017072 Sechium edule HOM05D004084 ORTHO05D004662 1.6e-18 97.8 128 47.7
SHI55208 Sapria himalayana HOM05D004084 ORTHO05D004662 1.0e-17 95.1 131 46.6
Nn7g36696 Nelumbo nucifera HOM05D004084 ORTHO05D004662 8.5e-17 92.0 101 51.5
arahy.Tifrunner.gnm1.ann1.57BBZ5 Arachis hypogaea HOM05D004084 ORTHO05D004662 4.7e-15 86.3 120 46.7
ClCG02G022870 Citrullus lanatus HOM05D004084 ORTHO05D004662 8.8e-14 82.0 66 68.2
SalBow6G0813 Salvia bowleyana HOM05D004084 ORTHO05D004662 6.3e-12 75.9 82 57.3
Pp3c4_28300 Physcomitrium patens HOM05D004084 ORTHO05D004662 5.4e-11 72.8 64 46.9
Haze_23225 Corylus avellana HOM05D004084 ORTHO05D004662 2.7e-10 70.5 68 51.5
QL01p017234 Quercus lobata HOM05D004084 ORTHO05D004662 8.6e-09 65.5 79 41.8
COL.COLO4_35674 Corchorus olitorius HOM05D004084 ORTHO05D004662 1.1e-08 65.1 68 50.0
MBI19_g25614_MAGBIO Magnolia biondii HOM05D004084 ORTHO05D004662 9.5e-08 62.0 49 55.1
BraA10t44098Z Brassica rapa HOM05D004084 ORTHO05D004662 2.1e-07 60.8 91 39.6
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 2.8e-07 60.5 60 43.3
A10p20270 Brassica napus HOM05D004084 ORTHO05D004662 2.8e-07 60.5 91 38.5
CARHR193520 Cardamine hirsuta HOM05D004084 ORTHO05D004662 4.7e-07 59.7 57 45.6
CSS0027788 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 1.0e-06 58.5 69 46.4


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