Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 7.1e-178 627.1 304 100.0
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 2.0e-132 476.1 305 78.7
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 3.8e-123 445.3 260 85.4
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 1.5e-122 443.4 260 85.0
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 1.7e-115 419.9 314 69.1
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 2.9e-115 419.1 308 69.5
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 2.1e-113 412.9 312 66.0
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 8.0e-113 411.0 317 67.8
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 4.0e-112 408.7 310 69.0
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 1.7e-110 403.3 309 66.0
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 1.7e-110 403.3 309 65.7
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 2.2e-110 402.9 311 66.9
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 1.1e-109 400.6 311 68.2
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 2.4e-109 399.4 319 65.5
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 2.7e-108 396.0 365 58.4
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 5.9e-108 394.8 310 64.8
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 2.9e-107 392.5 313 66.1
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 1.1e-106 390.6 304 66.1
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 2.5e-106 389.4 314 66.9
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 5.5e-106 388.3 264 73.1
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 2.8e-105 386.0 312 65.1
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 1.5e-103 380.2 312 65.1
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 3.4e-103 379.0 320 61.9
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 3.4e-103 379.0 405 54.3
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 1.3e-102 377.1 277 68.2
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 4.9e-102 375.2 275 69.5
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 6.3e-102 374.8 300 66.7
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 8.3e-102 374.4 275 70.2
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 8.3e-102 374.4 354 58.8
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 8.3e-102 374.4 302 65.2
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 8.3e-102 374.4 244 75.4
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 1.4e-101 373.6 275 68.7
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 3.2e-101 372.5 232 76.7
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 4.1e-101 372.1 275 69.1
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 5.4e-101 371.7 239 76.6
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 7.0e-101 371.3 307 65.5
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 9.2e-101 370.9 290 66.9
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 9.2e-101 370.9 232 77.2
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 2.0e-100 369.8 278 67.6
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 2.7e-100 369.4 327 60.2
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 2.7e-100 369.4 292 65.8
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 5.9e-100 368.2 241 72.2
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 7.8e-100 367.9 312 62.8
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.3e-99 367.1 311 62.1
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 1.3e-99 367.1 262 71.4
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 1.7e-99 366.7 244 73.0
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 1.7e-99 366.7 241 72.6
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 5.0e-99 365.2 232 75.4
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 5.0e-99 365.2 305 65.2
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 8.6e-99 364.4 284 66.5
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.1e-98 364.0 241 72.6
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 1.5e-98 363.6 329 59.3
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 1.9e-98 363.2 306 61.8
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 1.9e-98 363.2 238 72.7
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 2.5e-98 362.8 289 64.7
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 5.6e-98 361.7 242 74.4
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 5.6e-98 361.7 286 64.3
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 5.6e-98 361.7 298 64.8
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 7.3e-98 361.3 297 64.6
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 7.3e-98 361.3 238 74.8
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 9.5e-98 360.9 309 60.8
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 9.5e-98 360.9 232 74.1
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 2.0e-95 353.2 229 73.8
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 2.0e-95 353.2 242 70.2
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 3.4e-95 352.4 281 64.4
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 4.4e-95 352.1 321 59.5
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 4.4e-95 352.1 312 61.5
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 5.8e-95 351.7 295 61.7
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 6.4e-94 348.2 287 63.4
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 1.9e-93 346.7 244 69.7
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 9.2e-93 344.4 232 72.8
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 1.2e-92 344.0 238 68.1
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 1.6e-92 343.6 308 60.4
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.3e-91 340.5 232 71.6
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 2.3e-91 339.7 283 64.3
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 3.0e-91 339.3 240 68.8
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 3.3e-90 335.9 212 75.0
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 4.3e-90 335.5 283 64.3
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 6.8e-88 328.2 296 59.8
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 2.2e-86 323.2 228 68.4
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 2.9e-86 322.8 266 61.3
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 1.6e-84 317.0 235 66.4
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 1.6e-84 317.0 235 66.4
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 6.0e-84 315.1 289 59.2
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 2.3e-83 313.2 235 66.8
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 5.1e-83 312.0 229 67.2
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 6.6e-83 311.6 299 56.9
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 1.1e-82 310.8 302 56.6
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 3.3e-82 309.3 236 66.1
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 4.3e-82 308.9 235 66.0
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 2.1e-81 306.6 235 65.1
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 2.1e-81 306.6 240 63.8
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 6.8e-80 301.6 235 65.1
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 8.9e-80 301.2 310 55.2
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 1.2e-79 300.8 244 64.8
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 3.4e-79 299.3 193 73.6
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 1.7e-78 297.0 235 63.4
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 3.2e-77 292.7 259 59.1
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 3.9e-75 285.8 232 60.3
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 2.5e-74 283.1 301 53.8
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 2.1e-73 280.0 249 56.2
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 2.4e-72 276.6 283 52.7
Eucgr.J00687 Eucalyptus grandis HOM05D006179 ORTHO05D008370 6.8e-72 275.0 153 83.0
Ciclev10017644m.g Citrus clementina HOM05D006179 ORTHO05D008370 3.4e-71 272.7 153 83.7
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 5.4e-69 265.4 190 67.9
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 2.1e-68 263.5 236 55.5
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 3.0e-67 259.6 235 61.7
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 6.2e-65 251.9 230 56.5
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 9.9e-63 244.6 227 59.5
ECA233G4787 Erigeron canadensis HOM05D006179 ORTHO05D008370 2.2e-62 243.4 142 78.2
Peaxi162Scf00174g00223 Petunia axillaris HOM05D006179 ORTHO05D008370 1.6e-57 227.3 151 72.2
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 9.9e-55 218.0 159 67.9
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 1.1e-53 214.5 149 69.1
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 5.4e-53 212.2 158 65.2
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 9.0e-48 194.9 153 64.1
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.1e-37 161.4 148 59.5
Cre07.g350400 Chlamydomonas reinhardtii HOM05D006179 ORTHO05D008370 8.7e-35 151.8 196 36.2
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 1.4e-32 144.4 209 39.7
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 1.2e-31 141.4 165 51.5
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 7.7e-23 112.1 67 77.6
CSS0040434 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 3.3e-18 96.7 137 42.3
QL02p019212 Quercus lobata HOM05D006179 ORTHO05D008370 2.2e-09 67.4 35 80.0
Cpa.g.sc12.256 Carica papaya HOM05D004980 ORTHO05D006505 5.0e-06 56.2 101 32.7


User provided reference genes

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