Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G022390 Citrullus lanatus HOM05D003975 ORTHO05D009899 1.5e-106 389.4 185 100.0
Sed0002680 Sechium edule HOM05D003975 ORTHO05D009899 1.6e-39 166.8 84 91.7
Thecc.09G275700 Theobroma cacao HOM05D003975 ORTHO05D009899 5.7e-37 158.3 81 90.1
Thecc.09G155000 Theobroma cacao HOM05D003975 ORTHO05D009899 2.2e-36 156.4 81 88.9
MELO3C014515.2 Cucumis melo HOM05D003975 ORTHO05D009899 4.8e-36 155.2 81 90.1
GSVIVG01036058001 Vitis vinifera HOM05D003975 ORTHO05D009899 6.3e-36 154.8 81 86.4
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.1e-35 152.1 83 84.3
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 5.3e-35 151.8 83 84.3
CSS0027551 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009899 6.9e-35 151.4 81 85.2
Gorai.001G124000 Gossypium raimondii HOM05D003975 ORTHO05D009899 1.5e-34 150.2 81 82.7
RcHm_v2.0_Chr5g0047291 Rosa chinensis HOM05D003975 ORTHO05D009899 1.5e-34 150.2 81 84.0
Solyc11g068810.2 Solanum lycopersicum HOM05D003975 ORTHO05D009899 3.4e-34 149.1 81 82.7
Sopen11g027530 Solanum pennellii HOM05D003975 ORTHO05D009899 3.4e-34 149.1 81 82.7
Gohir.D07G115700 Gossypium hirsutum HOM05D003975 ORTHO05D009899 4.5e-34 148.7 81 81.5
Duzib150G1666 Durio zibethinus HOM05D003975 ORTHO05D009899 5.9e-34 148.3 81 84.0
QL01p011344 Quercus lobata HOM05D003975 ORTHO05D009899 1.3e-33 147.1 80 80.0
Gohir.A07G112200 Gossypium hirsutum HOM05D003975 ORTHO05D009899 1.7e-33 146.7 88 76.1
Eucgr.J00540 Eucalyptus grandis HOM05D003975 ORTHO05D009899 2.2e-33 146.4 81 81.5
PGSC0003DMG400019630 Solanum tuberosum HOM05D003975 ORTHO05D009899 2.9e-33 146.0 81 81.5
Atru.chr3.3141 Acer truncatum HOM05D003975 ORTHO05D009899 1.1e-32 144.1 81 81.5
Dinv08130 Davidia involucrata HOM05D003975 ORTHO05D009899 1.1e-32 144.1 85 77.6
Cc01_g08600 Coffea canephora HOM05D003975 ORTHO05D009899 1.4e-32 143.7 81 76.5
SalBow6G3564 Salvia bowleyana HOM05D003975 ORTHO05D009899 1.4e-32 143.7 81 77.8
Haze_23328 Corylus avellana HOM05D003975 ORTHO05D009899 1.9e-32 143.3 81 77.8
Hma1.2p1_0793F.1_g218650 Hydrangea macrophylla HOM05D003975 ORTHO05D009899 1.9e-32 143.3 81 81.5
Nitab4.5_0000893g0020 Nicotiana tabacum HOM05D003975 ORTHO05D009899 2.5e-32 142.9 81 80.2
Prupe.6G140000 Prunus persica HOM05D003975 ORTHO05D009899 2.5e-32 142.9 81 80.2
Nitab4.5_0001135g0190 Nicotiana tabacum HOM05D003975 ORTHO05D009899 4.2e-32 142.1 81 80.2
CAN.G745.37 Capsicum annuum HOM05D003975 ORTHO05D009899 5.5e-32 141.7 81 79.0
Cfa009967 Carpinus fangiana HOM05D003975 ORTHO05D009899 7.2e-32 141.4 81 75.3
CsaV3_6G038520 Cucumis sativus L. HOM05D003975 ORTHO05D009899 7.2e-32 141.4 76 84.2
PSO339G0200 Papaver somniferum HOM05D003975 ORTHO05D009899 7.2e-32 141.4 81 72.8
PSO384G0061 Papaver somniferum HOM05D003975 ORTHO05D009899 7.2e-32 141.4 81 72.8
MD03G1152900 Malus domestica HOM05D003975 ORTHO05D009899 9.4e-32 141.0 81 77.8
CANSAT54G1521 Cannabis sativa HOM05D003975 ORTHO05D009899 1.6e-31 140.2 79 78.5
CAN.G745.38 Capsicum annuum HOM05D003975 ORTHO05D009899 2.1e-31 139.8 81 77.8
Migut.D02414 Erythranthe guttata HOM05D003975 ORTHO05D009899 2.1e-31 139.8 81 77.8
Peaxi162Scf00224g00092 Petunia axillaris HOM05D003975 ORTHO05D009899 4.7e-31 138.7 87 69.0
TWI31G0968 Tripterygium wilfordii HOM05D003975 ORTHO05D009899 4.7e-31 138.7 79 81.0
Potri.004G201000 Populus trichocarpa HOM05D003975 ORTHO05D009899 3.9e-30 135.6 85 72.9
TAR633G2299 Trochodendron aralioides HOM05D003975 ORTHO05D009899 5.2e-30 135.2 72 79.2
COL.COLO4_22656 Corchorus olitorius HOM05D003975 ORTHO05D009899 8.8e-30 134.4 86 72.1
MBI01_g04527_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 1.1e-29 134.0 81 70.4
Potri.009G162200 Populus trichocarpa HOM05D003975 ORTHO05D009899 2.0e-29 133.3 85 70.6
Nn6g34748 Nelumbo nucifera HOM05D003975 ORTHO05D009899 2.6e-29 132.9 81 69.1
Lsat_1_v5_gn_2_56181 Lactuca sativa HOM05D000240 ORTHO05D001153 4.4e-29 132.1 81 67.9
ATR0772G086 Amborella trichopoda HOM05D003975 ORTHO05D009899 7.4e-29 131.3 83 68.7
Aqoxy4G02677 Aquilegia oxysepala HOM05D003975 ORTHO05D009899 1.3e-28 130.6 85 68.2
HanXRQChr09g0248811 Helianthus annuus HOM05D003975 ORTHO05D009899 2.8e-28 129.4 78 69.2
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 2.8e-28 129.4 85 69.4
Sabra15G0053200 Salix brachista HOM05D003975 ORTHO05D009899 3.7e-28 129.0 87 66.7
DCAR_013070 Daucus carota HOM05D003975 ORTHO05D009899 4.8e-28 128.6 81 69.1
Sabra15G0046300 Salix brachista HOM05D003975 ORTHO05D009899 6.3e-28 128.3 86 67.4
Sabra15G0052000 Salix brachista HOM05D003975 ORTHO05D009899 6.3e-28 128.3 86 67.4
Sabra15G0053900 Salix brachista HOM05D003975 ORTHO05D009899 6.3e-28 128.3 86 67.4
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 1.1e-27 127.5 85 67.1
THA.LOC104799562 Tarenaya hassleriana HOM05D003975 ORTHO05D009899 1.1e-27 127.5 81 72.8
Sabra15G0031600 Salix brachista HOM05D003975 ORTHO05D009899 1.8e-27 126.7 85 67.1
Sabra15G0048400 Salix brachista HOM05D003975 ORTHO05D009899 1.8e-27 126.7 85 67.1
Sabra15G0060100 Salix brachista HOM05D003975 ORTHO05D009899 1.8e-27 126.7 85 67.1
BcaC04g19558 Brassica carinata HOM05D003975 ORTHO05D009899 3.1e-27 125.9 81 69.1
C09p54430 Brassica napus HOM05D003975 ORTHO05D009899 3.1e-27 125.9 81 69.1
BolC9t58312H Brassica oleracea HOM05D003975 ORTHO05D009899 3.1e-27 125.9 81 69.1
A10p18580 Brassica napus HOM05D003975 ORTHO05D009899 4.1e-27 125.6 81 70.4
Ciclev10029713m.g Citrus clementina HOM05D003975 ORTHO05D009899 9.1e-27 124.4 83 71.1
ECA238G1997 Erigeron canadensis HOM05D003975 ORTHO05D009899 2.0e-26 123.2 81 64.2
BraA10t43938Z Brassica rapa HOM05D003975 ORTHO05D009899 3.5e-26 122.5 81 69.1
AUR62011465 Chenopodium quinoa HOM05D003975 ORTHO05D009899 3.5e-26 122.5 81 63.0
Lalb_Chr09g0335081 Lupinus albus HOM05D003975 ORTHO05D009899 4.5e-26 122.1 81 69.1
Phvul.003G054000 Phaseolus vulgaris HOM05D003975 ORTHO05D009899 5.9e-26 121.7 85 63.5
CARHR191340 Cardamine hirsuta HOM05D003975 ORTHO05D009899 7.7e-26 121.3 82 72.0
Glyma.08G290000 Glycine max HOM05D003975 ORTHO05D009899 7.7e-26 121.3 85 64.7
Sp6g23020 Schrenkiella parvula HOM05D003975 ORTHO05D009899 7.7e-26 121.3 82 72.0
BcaB08g36448 Brassica carinata HOM05D003975 ORTHO05D009899 1.3e-25 120.6 81 67.9
AT5G22210 Arabidopsis thaliana HOM05D003975 ORTHO05D009899 1.7e-25 120.2 82 70.7
arahy.Tifrunner.gnm1.ann1.QQFJ2J Arachis hypogaea HOM05D003975 ORTHO05D009899 2.2e-25 119.8 81 67.9
arahy.Tifrunner.gnm1.ann1.V52YDZ Arachis hypogaea HOM05D003975 ORTHO05D009899 2.2e-25 119.8 81 67.9
unitig_0.g1469 Utricularia gibba HOM05D003975 ORTHO05D009899 2.2e-25 119.8 81 67.9
Ah.01g020290 Amaranthus hybridus HOM05D003975 ORTHO05D009899 5.0e-25 118.6 81 64.2
Carub.0006s1995 Capsella rubella HOM05D003975 ORTHO05D009899 1.5e-24 117.1 82 68.3
AL6G33210 Arabidopsis lyrata HOM05D003975 ORTHO05D009899 1.9e-24 116.7 82 69.5
Glyma.18G134500 Glycine max HOM05D003975 ORTHO05D009899 1.9e-24 116.7 85 61.2
AUR62016590 Chenopodium quinoa HOM05D003975 ORTHO05D009899 2.5e-24 116.3 81 60.5
Sc03g0003650 Simmondsia chinensis HOM05D003975 ORTHO05D009899 1.2e-23 114.0 81 61.7
HPP92_009773 Vanilla planifolia HOM05D000917 ORTHO05D009899 3.6e-23 112.5 80 56.2
EL10Ac9g21860 Beta vulgaris HOM05D003975 ORTHO05D009899 1.0e-22 110.9 84 59.5
HPP92_009742 Vanilla planifolia HOM05D000917 ORTHO05D000764 2.3e-22 109.8 81 55.6
TAR268G0001 Trochodendron aralioides HOM05D001423 ORTHO05D001412 8.8e-22 107.8 74 68.9
MBI04_g20761_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 3.2e-08 62.8 47 53.2
MBI18_g28520_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 5.2e-06 55.5 36 58.3
SEGI_31848 Sequoiadendron giganteum HOM05D003975 ORTHO05D009899 6.8e-06 55.1 78 37.2


User provided reference genes

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