Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.0e-93 346.7 170 100.0
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 4.4e-76 288.1 156 90.4
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 3.7e-75 285.0 157 89.8
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 1.5e-63 246.5 158 74.7
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 4.7e-62 241.5 154 77.3
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 2.0e-60 236.1 156 70.5
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 3.4e-60 235.3 157 68.2
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 2.8e-59 232.3 157 70.7
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 2.8e-59 232.3 159 73.0
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 3.7e-59 231.9 160 71.9
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 4.1e-58 228.4 158 70.9
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 5.4e-58 228.0 169 66.3
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 7.0e-58 227.6 161 69.6
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 9.2e-58 227.3 166 68.7
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 2.7e-57 225.7 157 68.8
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.3e-56 222.6 165 65.5
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 2.9e-56 222.2 159 70.4
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 3.8e-56 221.9 156 70.5
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 5.0e-56 221.5 157 68.2
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.1e-55 220.3 156 67.9
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.9e-55 219.5 156 68.6
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 1.2e-54 216.9 162 65.4
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 1.2e-54 216.9 156 67.9
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 1.2e-54 216.9 169 64.5
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 8.0e-54 214.2 158 66.5
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 1.8e-53 213.0 161 64.6
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 2.3e-53 212.6 157 68.8
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 4.0e-53 211.8 148 68.2
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 5.2e-53 211.5 172 60.5
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 5.2e-53 211.5 157 65.6
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 8.9e-53 210.7 156 66.7
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 5.7e-52 208.0 165 64.8
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.2e-51 206.1 165 63.0
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 1.4e-50 203.4 201 54.7
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 2.4e-50 202.6 158 62.7
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.2e-49 200.3 157 62.4
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.5e-49 198.7 158 65.2
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 4.6e-49 198.4 158 65.2
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 7.8e-49 197.6 156 62.2
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 3.9e-48 195.3 168 58.3
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 3.9e-48 195.3 155 60.6
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.1e-47 193.7 157 62.4
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 2.8e-46 189.1 157 57.3
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 3.6e-46 188.7 169 61.5
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 4.7e-46 188.3 170 61.2
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.0e-45 187.2 167 61.1
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 1.4e-45 186.8 159 60.4
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 2.3e-45 186.0 158 63.3
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 3.1e-45 185.7 157 59.2
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 8.9e-45 184.1 168 58.9
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 8.9e-45 184.1 157 57.3
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 4.4e-44 181.8 169 56.8
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 9.8e-44 180.6 158 57.0
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.3e-43 180.3 168 57.7
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.7e-43 179.9 171 52.6
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 2.2e-43 179.5 150 60.7
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 2.9e-43 179.1 150 60.7
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.4e-42 176.8 190 51.6
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 4.1e-42 175.3 126 65.9
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 1.6e-41 173.3 145 57.2
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.0e-40 170.6 156 54.5
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 1.3e-40 170.2 161 55.3
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 1.3e-40 170.2 161 55.3
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 2.3e-40 169.5 151 57.0
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 3.9e-40 168.7 155 54.8
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 6.6e-40 167.9 151 56.3
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 6.6e-40 167.9 153 56.2
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 8.6e-40 167.5 161 54.7
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 8.6e-40 167.5 161 54.7
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 8.6e-40 167.5 161 54.7
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 8.6e-40 167.5 156 53.2
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 1.9e-39 166.4 146 56.2
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 4.3e-39 165.2 151 55.0
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 7.3e-39 164.5 151 55.0
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.2e-38 163.7 166 53.0
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.2e-38 163.7 166 52.4
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 8.1e-38 161.0 157 52.9
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 8.1e-38 161.0 164 52.4
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 1.1e-37 160.6 152 53.9
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.1e-37 160.6 158 51.3
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 8.9e-37 157.5 155 53.5
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 5.8e-36 154.8 146 52.7
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.7e-35 153.3 162 49.4
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 4.1e-34 148.7 115 64.3
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 5.1e-32 141.7 154 44.2
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 5.1e-32 141.7 154 44.2
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 8.6e-32 141.0 156 44.9
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 3.3e-31 139.0 137 51.1
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 5.6e-31 138.3 136 51.5
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 1.2e-30 137.1 150 44.7
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 4.0e-29 132.1 103 62.1
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 3.4e-28 129.0 153 45.8
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 3.2e-26 122.5 104 56.7
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 1.7e-24 116.7 80 68.8
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.9e-23 113.2 120 53.3
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 3.6e-22 109.0 112 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 4.7e-22 108.6 129 41.9
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 6.9e-21 104.8 86 61.6
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 7.6e-20 101.3 99 49.5
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 7.8e-17 91.3 69 62.3
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 8.4e-11 71.2 44 75.0
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 5.1e-08 62.0 48 58.3
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 5.6e-07 58.5 36 72.2


User provided reference genes

Program Settings