Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 1.5e-77 292.7 142 100.0
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 1.7e-73 279.3 142 93.7
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 8.4e-73 276.9 142 93.7
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 2.8e-68 261.9 139 89.2
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 3.7e-60 235.0 142 78.2
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 3.1e-59 231.9 139 77.7
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 5.3e-59 231.1 140 78.6
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.5e-58 229.6 142 75.4
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.5e-58 229.6 142 75.4
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 1.5e-58 229.6 139 79.1
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 7.6e-58 227.3 142 75.4
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.2e-57 225.7 142 73.9
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 2.9e-57 225.3 139 74.1
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 1.4e-56 223.0 136 75.0
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.4e-56 223.0 142 74.6
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 3.2e-56 221.9 135 77.8
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 4.2e-56 221.5 139 76.3
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 4.2e-56 221.5 142 75.4
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 7.2e-56 220.7 136 77.9
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 7.2e-56 220.7 143 72.7
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 9.3e-56 220.3 143 72.7
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 9.3e-56 220.3 138 74.6
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 1.2e-55 219.9 142 74.6
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 1.2e-55 219.9 142 73.9
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.2e-55 219.9 139 73.4
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 2.1e-55 219.2 139 72.7
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 2.1e-55 219.2 136 77.9
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 2.7e-55 218.8 136 77.2
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 2.7e-55 218.8 136 77.2
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 2.7e-55 218.8 136 77.2
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 2.7e-55 218.8 136 77.2
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 2.7e-55 218.8 136 77.2
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 2.7e-55 218.8 142 73.2
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 2.7e-55 218.8 136 77.2
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 2.7e-55 218.8 139 74.1
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 2.7e-55 218.8 143 73.4
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 3.6e-55 218.4 139 74.1
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 7.9e-55 217.2 138 74.6
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 7.9e-55 217.2 138 74.6
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 7.9e-55 217.2 135 76.3
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 7.9e-55 217.2 139 73.4
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 1.0e-54 216.9 136 76.5
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.0e-54 216.9 136 72.8
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.0e-54 216.9 139 71.9
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 1.3e-54 216.5 138 73.2
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.3e-54 216.5 136 77.2
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 3.0e-54 215.3 136 76.5
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 3.9e-54 214.9 134 76.1
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 3.9e-54 214.9 138 72.5
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 6.7e-54 214.2 139 71.9
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 8.7e-54 213.8 141 73.8
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 1.1e-53 213.4 136 75.7
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 1.5e-53 213.0 141 68.1
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 1.5e-53 213.0 137 75.2
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 1.5e-53 213.0 137 75.2
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 1.5e-53 213.0 137 75.2
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 1.5e-53 213.0 135 74.8
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 1.5e-53 213.0 140 72.9
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 2.5e-53 212.2 139 71.9
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 4.3e-53 211.5 135 73.3
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 4.3e-53 211.5 135 75.6
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 9.7e-53 210.3 137 75.9
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 9.7e-53 210.3 142 68.3
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 1.3e-52 209.9 143 69.2
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.3e-52 209.9 135 73.3
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 1.3e-52 209.9 135 71.9
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 2.2e-52 209.1 135 71.9
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 2.2e-52 209.1 134 73.1
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 2.2e-52 209.1 136 72.8
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 2.2e-52 209.1 134 71.6
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 2.8e-52 208.8 135 71.9
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 3.7e-52 208.4 135 73.3
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 3.7e-52 208.4 139 70.5
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 4.8e-52 208.0 139 69.8
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 6.3e-52 207.6 135 72.6
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 6.3e-52 207.6 143 68.5
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 6.3e-52 207.6 135 70.4
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 1.1e-51 206.8 138 69.6
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 1.1e-51 206.8 138 68.8
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.4e-51 206.5 137 69.3
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.4e-51 206.5 143 67.8
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 2.4e-51 205.7 135 72.6
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 4.1e-51 204.9 134 73.9
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 1.5e-50 203.0 136 69.1
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 3.4e-50 201.8 138 68.8
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 4.5e-50 201.4 128 75.0
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 5.9e-50 201.1 138 69.6
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 8.5e-49 197.2 139 69.1
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 1.1e-48 196.8 131 71.0
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.2e-47 193.4 143 62.9
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 3.6e-47 191.8 139 67.6
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 3.3e-45 185.3 139 62.6
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 3.7e-44 181.8 132 67.4
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 5.3e-43 177.9 142 64.8
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.2e-41 172.6 164 55.5
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 3.8e-41 171.8 131 62.6
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 9.4e-40 167.2 142 62.7
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 2.7e-39 165.6 132 57.6
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 6.1e-39 164.5 113 72.6
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 3.9e-38 161.8 127 61.4
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 2.6e-37 159.1 96 76.0
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 4.4e-37 158.3 137 59.1
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 1.7e-36 156.4 142 56.3
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.8e-36 155.6 159 53.5
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 3.5e-34 148.7 101 69.3
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.5e-34 148.3 142 57.7
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 4.5e-34 148.3 101 68.3
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 7.7e-34 147.5 96 70.8
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 6.5e-33 144.4 94 71.3
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 2.7e-31 139.0 100 62.0
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 1.0e-30 137.1 136 53.7
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 5.7e-29 131.3 91 65.9
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 1.0e-22 110.5 139 46.0
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.8e-22 109.8 96 56.2
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.2e-21 107.1 129 45.0
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 2.8e-20 102.4 95 52.6
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 2.4e-19 99.4 142 43.0
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 1.6e-18 96.7 62 71.0
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 4.5e-18 95.1 117 42.7
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 7.7e-18 94.4 62 71.0
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 2.3e-17 92.8 126 39.7
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 3.0e-14 82.4 60 61.7
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 2.4e-11 72.8 43 76.7
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 5.4e-11 71.6 44 72.7
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 1.1e-08 63.9 41 78.0
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 3.6e-07 58.9 37 70.3
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.8e-06 56.6 33 75.8


User provided reference genes

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