Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 2.7e-67 258.8 163 100.0
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 1.8e-42 176.4 172 73.3
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 7.5e-33 144.4 165 66.1
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 9.8e-33 144.1 161 62.1
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 3.4e-25 119.0 154 57.8
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 1.7e-24 116.7 171 55.0
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 1.7e-24 116.7 171 55.0
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 1.7e-24 116.7 171 55.0
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 4.9e-24 115.2 171 53.8
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 6.3e-24 114.8 167 47.9
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 1.4e-23 113.6 174 47.1
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.4e-23 112.8 166 47.0
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.2e-23 112.5 169 46.7
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 7.0e-23 111.3 169 47.9
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 3.5e-22 109.0 160 46.9
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 5.9e-22 108.2 173 45.7
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 7.8e-22 107.8 169 46.2
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 1.0e-21 107.5 171 45.6
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 1.0e-21 107.5 127 51.2
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.3e-21 107.1 171 45.0
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.3e-21 107.1 171 45.0
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 1.7e-21 106.7 145 46.9
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 5.0e-21 105.1 171 44.4
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.5e-20 103.6 175 45.7
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 2.5e-20 102.8 153 58.8
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 3.3e-20 102.4 174 46.0
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 7.3e-20 101.3 175 43.4
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 1.2e-19 100.5 177 42.4
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.8e-19 99.4 146 42.5
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 3.6e-19 99.0 160 48.1
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 3.6e-19 99.0 172 43.6
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 4.7e-19 98.6 136 56.6
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 6.1e-19 98.2 166 47.0
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 1.0e-18 97.4 174 48.9
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 1.4e-18 97.1 170 43.5
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.8e-18 96.7 174 46.0
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 2.3e-18 96.3 136 47.8
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.3e-18 96.3 172 40.7
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.1e-18 95.9 177 43.5
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 4.0e-18 95.5 188 41.5
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 4.0e-18 95.5 168 45.2
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 5.2e-18 95.1 176 42.0
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 5.2e-18 95.1 170 47.6
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 5.2e-18 95.1 165 43.6
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 6.8e-18 94.7 166 48.8
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 6.8e-18 94.7 172 41.3
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 8.9e-18 94.4 165 50.9
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.5e-17 93.6 132 44.7
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 2.0e-17 93.2 153 43.1
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 2.0e-17 93.2 137 53.3
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 4.4e-17 92.0 164 44.5
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 5.8e-17 91.7 159 43.4
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 5.8e-17 91.7 109 51.4
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 5.8e-17 91.7 137 52.6
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 7.5e-17 91.3 124 49.2
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 7.5e-17 91.3 93 59.1
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 9.8e-17 90.9 174 44.8
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 1.7e-16 90.1 107 54.2
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 1.7e-16 90.1 142 57.7
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 1.7e-16 90.1 99 58.6
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 2.2e-16 89.7 190 40.5
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 2.2e-16 89.7 171 41.5
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 3.7e-16 89.0 149 44.3
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 1.1e-15 87.4 157 49.0
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 1.4e-15 87.0 154 43.5
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 2.4e-15 86.3 172 38.4
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 3.2e-15 85.9 162 46.9
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 4.1e-15 85.5 106 53.8
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 5.4e-15 85.1 165 44.2
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 5.4e-15 85.1 167 46.7
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 9.2e-15 84.3 166 41.6
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.6e-14 83.6 154 41.6
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 2.0e-14 83.2 169 40.8
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 4.6e-14 82.0 163 38.7
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 7.8e-14 81.3 167 40.7
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 7.8e-14 81.3 163 42.9
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 7.8e-14 81.3 105 52.4
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.0e-13 80.9 179 50.3
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.3e-13 80.5 92 51.1
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 1.3e-13 80.5 169 46.2
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 2.3e-13 79.7 177 42.9
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 1.1e-12 77.4 156 39.1
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 3.3e-12 75.9 110 57.3
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 3.3e-12 75.9 122 42.6
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 7.3e-12 74.7 165 37.0
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 1.2e-11 73.9 124 44.4
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 2.1e-11 73.2 166 36.1
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 3.6e-11 72.4 170 38.8
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 4.7e-11 72.0 166 35.5
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 4.7e-11 72.0 166 35.5
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 1.8e-10 70.1 145 37.9
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 2.3e-10 69.7 172 34.3
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 4.0e-10 68.9 107 43.0
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 6.8e-10 68.2 171 33.9
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.2e-09 67.4 142 35.9
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 2.0e-09 66.6 169 39.1
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 3.4e-09 65.9 170 44.1
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 2.2e-08 63.2 53 60.4
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 1.9e-07 60.1 196 31.6
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 2.4e-07 59.7 74 45.9
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 4.1e-07 58.9 193 32.6
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 5.4e-07 58.5 175 42.3
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 7.1e-07 58.2 114 37.7
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 3.5e-06 55.8 48 60.4
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 3.5e-06 55.8 48 60.4
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 3.5e-06 55.8 48 60.4


User provided reference genes

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