Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 7.8e-253 876.7 461 100.0
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 1.7e-223 779.2 461 88.1
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 5.8e-216 754.2 459 86.1
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 1.2e-189 666.8 461 78.3
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 1.3e-106 391.0 473 52.2
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 2.9e-106 389.8 481 52.6
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 4.9e-106 389.0 391 60.9
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 8.4e-106 388.3 469 51.4
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.8e-93 346.7 477 49.9
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 2.6e-91 340.1 474 48.7
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 2.9e-90 336.7 482 48.5
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 5.0e-90 335.9 479 48.4
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 1.4e-89 334.3 480 48.8
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 4.6e-88 329.3 478 47.9
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 7.9e-88 328.6 479 46.8
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 5.1e-87 325.9 478 47.5
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 1.1e-86 324.7 477 47.4
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.5e-86 323.6 478 47.5
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 4.3e-86 322.8 478 46.9
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 4.8e-85 319.3 477 47.4
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.3e-82 311.2 481 46.2
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 3.8e-82 309.7 474 45.4
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 6.5e-82 308.9 500 44.6
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 8.5e-82 308.5 474 47.0
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 5.5e-81 305.8 478 45.0
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.6e-80 304.3 473 44.8
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 7.9e-80 302.0 471 45.0
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 1.4e-79 301.2 471 45.6
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.8e-79 300.8 497 45.1
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 3.0e-79 300.1 471 46.3
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 3.3e-78 296.6 485 44.5
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 4.4e-78 296.2 471 46.9
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 9.7e-78 295.0 476 46.0
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.7e-77 294.3 476 45.6
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 2.8e-77 293.5 479 46.3
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.4e-76 291.2 475 43.6
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 2.4e-76 290.4 481 43.5
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 3.1e-76 290.0 479 42.8
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 1.2e-75 288.1 478 44.4
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 1.5e-75 287.7 476 44.7
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 2.0e-75 287.3 481 44.1
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 4.5e-75 286.2 495 44.2
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 1.0e-74 285.0 496 42.7
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.0e-74 285.0 476 44.5
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.3e-74 284.6 494 43.3
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 1.3e-74 284.6 480 46.2
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.3e-74 284.6 495 43.8
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 1.7e-74 284.3 499 43.3
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 3.8e-74 283.1 480 46.0
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 3.8e-74 283.1 494 43.1
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 4.2e-73 279.6 481 42.6
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 9.4e-73 278.5 467 43.9
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 3.6e-72 276.6 491 42.0
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 3.9e-71 273.1 492 44.3
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 8.8e-71 271.9 496 42.5
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 1.1e-70 271.6 495 43.4
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 5.3e-68 262.7 528 39.4
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 7.7e-67 258.8 450 42.4
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 5.0e-66 256.1 469 41.6
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-65 255.0 469 40.5
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.5e-65 254.6 438 41.8
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 1.4e-63 248.1 469 40.5
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 1.2e-62 245.0 499 40.7
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 1.7e-61 241.1 472 41.5
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 4.1e-60 236.5 461 39.3
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 7.7e-59 232.3 465 40.0
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 1.7e-58 231.1 462 39.2
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 4.2e-57 226.5 312 47.4
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 7.2e-57 225.7 480 39.2
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 1.6e-56 224.6 506 38.5
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 2.1e-56 224.2 447 37.8
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 8.0e-56 222.2 460 38.9
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 2.3e-55 220.7 436 40.8
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 2.3e-55 220.7 472 39.8
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 5.2e-55 219.5 501 36.1
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 1.5e-54 218.0 497 36.0
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 1.5e-54 218.0 473 37.6
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 2.2e-53 214.2 360 44.2
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 2.8e-53 213.8 456 36.6
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 2.8e-53 213.8 471 38.2
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 3.7e-53 213.4 458 38.2
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 2.9e-50 203.8 458 36.5
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 3.8e-50 203.4 458 36.5
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 7.2e-49 199.1 460 36.1
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 6.8e-47 192.6 541 34.0
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 1.5e-46 191.4 495 35.4
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 3.4e-46 190.3 490 36.7
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 7.5e-46 189.1 467 37.0
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 1.1e-44 185.3 479 37.4
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 3.8e-42 176.8 467 34.9
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 6.8e-39 166.0 380 37.4
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 5.7e-38 162.9 479 34.2
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 7.5e-38 162.5 519 32.9
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 3.2e-36 157.1 475 32.2
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.0e-34 152.1 519 32.0
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 3.0e-34 150.6 479 31.9
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 2.3e-31 141.0 455 32.7
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 2.0e-30 137.9 461 32.1
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 9.8e-30 135.6 447 32.7
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 9.8e-30 135.6 450 32.7
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 1.7e-29 134.8 455 32.3
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 6.2e-24 116.3 533 30.4
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 1.4e-23 115.2 486 30.2
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 1.4e-23 115.2 350 36.0
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 5.2e-23 113.2 376 34.6
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 1.6e-19 101.7 180 46.1
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 3.5e-19 100.5 480 30.4
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 6.6e-18 96.3 179 40.8
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 8.6e-18 95.9 456 30.3
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 3.3e-17 94.0 510 30.0
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 7.6e-14 82.8 168 39.3
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 3.8e-13 80.5 162 39.5
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 3.2e-12 77.4 441 25.6
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 2.7e-11 74.3 485 25.8
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 1.1e-09 68.9 156 34.6
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 4.3e-09 67.0 156 34.6
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 1.1e-07 62.4 156 34.0
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 1.1e-07 62.4 175 37.1
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 2.0e-06 58.2 70 44.3


User provided reference genes

Program Settings