Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G017090 Citrullus lanatus HOM05D002136 ORTHO05D002145 1.9e-136 489.2 250 100.0
MELO3C004426.2 Cucumis melo HOM05D002136 ORTHO05D002145 2.6e-109 399.1 232 89.2
CsaV3_2G003680 Cucumis sativus L. HOM05D002136 ORTHO05D002145 6.0e-106 387.9 231 87.0
Sed0006701 Sechium edule HOM05D002136 ORTHO05D002145 3.5e-82 308.9 231 74.0
Gohir.D13G190800 Gossypium hirsutum HOM05D002136 ORTHO05D002145 8.8e-17 91.7 337 29.4
Manes.14G112628 Manihot esculenta HOM05D002136 ORTHO05D002145 2.6e-16 90.1 120 49.2
MD15G1153100 Malus domestica HOM05D002136 ORTHO05D002145 2.8e-15 86.7 136 47.8
arahy.Tifrunner.gnm1.ann1.D8DRS0 Arachis hypogaea HOM05D002136 ORTHO05D002145 6.3e-15 85.5 266 34.2
Glyma.02G203100 Glycine max HOM05D002136 ORTHO05D002145 1.8e-14 84.0 371 29.1
Prupe.7G261500 Prunus persica HOM05D002136 ORTHO05D002145 2.4e-14 83.6 192 40.6
ClCG06G012320 Citrullus lanatus HOM05D002136 ORTHO05D002145 9.1e-14 81.6 332 29.8
Glyma.17G074600 Glycine max HOM05D002136 ORTHO05D002145 1.2e-13 81.3 375 27.7
Gorai.013G216600 Gossypium raimondii HOM05D002136 ORTHO05D002145 1.6e-13 80.9 258 31.8
FAN26G0651 Fragaria x ananassa HOM05D002136 ORTHO05D002145 2.7e-13 80.1 189 35.4
Sabra06G0141000 Salix brachista HOM05D002136 ORTHO05D002145 5.9e-13 79.0 121 43.8
FAN23G0309 Fragaria x ananassa HOM05D002136 ORTHO05D002145 7.7e-13 78.6 191 36.6
FAN19G2520 Fragaria x ananassa HOM05D002136 ORTHO05D002145 2.9e-12 76.6 189 34.9
FAN28G0826 Fragaria x ananassa HOM05D002136 ORTHO05D002145 2.9e-12 76.6 189 34.9
VMungo1080G0769 Vigna mungo HOM05D002136 ORTHO05D002145 2.9e-12 76.6 233 32.2
Potri.018G108200 Populus trichocarpa HOM05D002136 ORTHO05D002145 3.8e-12 76.3 125 41.6
arahy.Tifrunner.gnm1.ann1.CL36ZV Arachis hypogaea HOM05D002136 ORTHO05D002145 5.0e-12 75.9 141 41.8
MELO3C010233.2 Cucumis melo HOM05D002136 ORTHO05D002145 5.0e-12 75.9 333 28.2
Duzib187G1505 Durio zibethinus HOM05D002136 ORTHO05D002145 5.0e-12 75.9 92 52.2
Gohir.A13G184451 Gossypium hirsutum HOM05D002136 ORTHO05D002145 5.0e-12 75.9 258 31.4
Potri.006G185700 Populus trichocarpa HOM05D002136 ORTHO05D002145 6.5e-12 75.5 126 43.7
CiPaw.16G113900 Carya illinoinensis HOM05D002136 ORTHO05D002145 8.6e-12 75.1 136 40.4
Sed0008209 Sechium edule HOM05D002136 ORTHO05D002145 1.1e-11 74.7 313 27.2
Cc06_g15140 Coffea canephora HOM05D002136 ORTHO05D002145 1.9e-11 73.9 122 41.0
Dinv42867 Davidia involucrata HOM05D000882 ORTHO05D001142 1.9e-11 73.9 126 42.1
Dinv43233 Davidia involucrata HOM05D000882 ORTHO05D001142 1.9e-11 73.9 126 42.1
FvH4_1g01050 Fragaria vesca HOM05D002136 ORTHO05D002145 1.9e-11 73.9 230 32.2
Ca_05791_v3 Cicer arietinum L. HOM05D002136 ORTHO05D002145 4.2e-11 72.8 237 30.4
Migut.K00334 Erythranthe guttata HOM05D002136 ORTHO05D002145 7.2e-11 72.0 304 28.6
CsaV3_1G028840 Cucumis sativus L. HOM05D002136 ORTHO05D002145 1.6e-10 70.9 333 27.6
Thecc.09G032000 Theobroma cacao HOM05D002136 ORTHO05D002145 2.1e-10 70.5 96 47.9
TWI34G1274 Tripterygium wilfordii HOM05D002136 ORTHO05D002145 2.1e-10 70.5 133 42.1
Actinidia38334 Actinidia chinensis HOM05D000882 ORTHO05D001142 2.8e-10 70.1 319 27.3
Cfa020837 Carpinus fangiana HOM05D002136 ORTHO05D002145 2.8e-10 70.1 139 36.7
Ciclev10028046m.g Citrus clementina HOM05D002136 ORTHO05D002145 2.8e-10 70.1 219 33.8
COL.COLO4_18794 Corchorus olitorius HOM05D002136 ORTHO05D002145 2.8e-10 70.1 136 43.4
Haze_19220 Corylus avellana HOM05D002136 ORTHO05D002145 2.8e-10 70.1 142 35.9
Duzib168G2318 Durio zibethinus HOM05D002136 ORTHO05D002145 2.8e-10 70.1 98 48.0
Lalb_Chr07g0179811 Lupinus albus HOM05D002136 ORTHO05D002145 3.6e-10 69.7 98 48.0
Psat1g021960 Pisum sativum HOM05D002136 ORTHO05D002145 4.7e-10 69.3 205 31.7
Eucgr.C02575 Eucalyptus grandis HOM05D002136 ORTHO05D002145 6.1e-10 68.9 192 34.4
Sabra18G0091800 Salix brachista HOM05D002136 ORTHO05D002145 6.1e-10 68.9 125 39.2
Phvul.005G040700 Phaseolus vulgaris HOM05D002136 ORTHO05D002145 8.0e-10 68.6 376 25.5
Phvul.009G206800 Phaseolus vulgaris HOM05D002136 ORTHO05D002145 8.0e-10 68.6 205 32.2
Eucgr.C00355 Eucalyptus grandis HOM05D002136 ORTHO05D002145 1.0e-09 68.2 260 28.8
Lj6g0008983 Lotus japonicus HOM05D002136 ORTHO05D002145 1.0e-09 68.2 173 34.7
Manes.06G036600 Manihot esculenta HOM05D002136 ORTHO05D002145 1.0e-09 68.2 125 41.6
PSO782G3912 Papaver somniferum HOM05D002136 ORTHO05D002145 1.0e-09 68.2 268 30.2
Dinv41387 Davidia involucrata HOM05D002136 ORTHO05D002145 1.4e-09 67.8 121 38.0
Atru.chr7.100 Acer truncatum HOM05D002136 ORTHO05D002145 1.8e-09 67.4 225 33.3
Duzib150G0547 Durio zibethinus HOM05D002136 ORTHO05D002145 4.0e-09 66.2 117 43.6
Gorai.010G112500 Gossypium raimondii HOM05D002136 ORTHO05D002145 4.0e-09 66.2 364 26.1
TWI63G0145 Tripterygium wilfordii HOM05D002136 ORTHO05D002145 6.8e-09 65.5 131 42.7
CANSAT11G0512 Cannabis sativa HOM05D002136 ORTHO05D002145 8.8e-09 65.1 182 31.9
Cpa.g.sc46.142 Carica papaya HOM05D002136 ORTHO05D002145 8.8e-09 65.1 126 39.7
Peaxi162Scf00062g00314 Petunia axillaris HOM05D002136 ORTHO05D002145 1.5e-08 64.3 299 25.8
Nitab4.5_0005188g0020 Nicotiana tabacum HOM05D002136 ORTHO05D002145 2.0e-08 63.9 375 23.5
Gohir.A06G096900 Gossypium hirsutum HOM05D002136 ORTHO05D002145 2.6e-08 63.5 359 26.2
TAR636G1536 Trochodendron aralioides HOM05D002136 ORTHO05D002145 3.4e-08 63.2 94 44.7
RcHm_v2.0_Chr2g0085811 Rosa chinensis HOM05D002136 ORTHO05D002145 4.4e-08 62.8 49 67.3
Aqoxy7G03429 Aquilegia oxysepala HOM05D002136 ORTHO05D002145 1.3e-07 61.2 308 25.3
Rhsim01G0035300 Rhododendron simsii HOM05D000882 ORTHO05D001142 1.3e-07 61.2 153 33.3
CSS0014039 Camellia sinensis var. sinensis HOM05D002136 ORTHO05D002145 2.2e-07 60.5 50 54.0
Glyma.06G221600 Glycine max HOM05D002136 ORTHO05D002145 2.2e-07 60.5 118 40.7
Gohir.D06G097400 Gossypium hirsutum HOM05D002136 ORTHO05D002145 2.2e-07 60.5 360 25.8
QL02p093024 Quercus lobata HOM05D002136 ORTHO05D002145 2.2e-07 60.5 79 43.0
Gorai.009G055500 Gossypium raimondii HOM05D002136 ORTHO05D002145 2.8e-07 60.1 418 26.1
Medtr2g460800 Medicago truncatula HOM05D002136 ORTHO05D002145 3.7e-07 59.7 228 30.7
CiPaw.15G175400 Carya illinoinensis HOM05D002136 ORTHO05D002145 6.3e-07 58.9 304 27.6
TAR625G1124 Trochodendron aralioides HOM05D002136 ORTHO05D002145 6.3e-07 58.9 136 36.0
Gohir.A05G052200 Gossypium hirsutum HOM05D002136 ORTHO05D002145 8.3e-07 58.5 416 26.0
Nitab4.5_0006527g0020 Nicotiana tabacum HOM05D002136 ORTHO05D002145 1.1e-06 58.2 170 26.5
PGR102G1057 Punica granatum HOM05D002136 ORTHO05D002145 1.1e-06 58.2 211 30.3
Gohir.D05G053700 Gossypium hirsutum HOM05D002136 ORTHO05D002145 1.8e-06 57.4 199 32.7
PGSC0003DMG400007900 Solanum tuberosum HOM05D002136 ORTHO05D002145 2.4e-06 57.0 124 35.5
PGSC0003DMG400011178 Solanum tuberosum HOM05D002136 ORTHO05D002145 2.4e-06 57.0 125 32.0
Nitab4.5_0001478g0030 Nicotiana tabacum HOM05D002136 ORTHO05D002145 3.1e-06 56.6 111 36.9
SalBow1G7717 Salvia bowleyana HOM05D002136 ORTHO05D002145 4.1e-06 56.2 274 27.4
Lalb_Chr11g0072721 Lupinus albus HOM05D002136 ORTHO05D002145 5.4e-06 55.8 236 29.7
Hma1.2p1_1764F.1_g301410 Hydrangea macrophylla HOM05D029078 ORTHO05D025738 7.0e-06 55.5 110 39.1
SGA_v2.0_scaffold206G41810 Striga asiatica HOM05D002136 ORTHO05D002145 7.0e-06 55.5 258 27.1
CSS0000642 Camellia sinensis var. sinensis HOM05D002136 ORTHO05D002145 9.2e-06 55.1 46 56.5
CAN.G551.37 Capsicum annuum HOM05D002136 ORTHO05D002145 9.2e-06 55.1 131 32.8


User provided reference genes

Program Settings