Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 1.8e-162 575.9 298 100.0
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 7.7e-153 543.9 298 95.6
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 1.7e-144 516.2 312 87.2
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 9.5e-135 483.8 299 88.6
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 3.9e-128 461.8 297 80.8
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 1.2e-126 456.8 298 81.5
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.2e-126 456.8 298 80.9
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 1.2e-126 456.8 298 78.5
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 8.1e-126 454.1 298 80.5
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 1.4e-125 453.4 298 78.9
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 2.3e-125 452.6 298 80.2
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 3.1e-125 452.2 300 81.7
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 4.0e-125 451.8 300 80.3
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 1.5e-124 449.9 299 80.3
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 4.4e-124 448.4 298 79.5
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 7.6e-124 447.6 298 78.2
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 2.2e-123 446.0 299 78.3
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 4.9e-123 444.9 298 78.9
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 4.9e-123 444.9 298 78.9
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 1.4e-122 443.4 299 79.3
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 1.9e-122 443.0 298 77.9
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 5.4e-122 441.4 298 78.9
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 1.2e-121 440.3 298 78.9
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 1.6e-121 439.9 298 77.9
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 2.1e-121 439.5 298 77.9
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 3.5e-121 438.7 299 77.9
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 5.1e-120 434.9 304 75.3
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 6.6e-120 434.5 298 76.2
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 8.6e-120 434.1 299 77.6
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 1.5e-119 433.3 299 76.3
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 3.3e-119 432.2 299 77.3
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 4.3e-119 431.8 298 75.5
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.6e-119 431.4 299 75.9
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 9.6e-119 430.6 302 77.5
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 9.6e-119 430.6 299 75.9
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 9.6e-119 430.6 301 76.7
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 2.1e-118 429.5 301 77.7
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.8e-118 429.1 299 75.6
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 3.6e-118 428.7 298 74.5
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 6.2e-118 427.9 299 75.6
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 6.2e-118 427.9 299 76.9
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 8.1e-118 427.6 302 75.5
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 8.1e-118 427.6 299 75.6
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 1.4e-117 426.8 301 77.1
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.4e-117 426.8 299 75.6
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 3.1e-117 425.6 299 76.6
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 4.0e-117 425.2 302 76.2
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 5.2e-117 424.9 300 76.3
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 6.8e-117 424.5 298 74.2
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 6.8e-117 424.5 299 77.3
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 8.9e-117 424.1 301 76.1
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 8.9e-117 424.1 302 74.8
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 2.6e-116 422.5 298 74.8
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 3.4e-116 422.2 298 73.8
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 1.3e-115 420.2 306 76.1
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 2.2e-115 419.5 298 73.2
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 4.9e-115 418.3 298 74.2
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 8.4e-115 417.5 294 73.1
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 8.4e-115 417.5 299 74.6
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 3.2e-114 415.6 295 75.6
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 3.2e-114 415.6 298 73.8
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 5.4e-114 414.8 298 73.8
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 9.3e-114 414.1 300 74.7
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 1.6e-113 413.3 299 73.2
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 1.6e-113 413.3 299 74.2
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 4.6e-113 411.8 298 73.2
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 7.8e-113 411.0 303 72.6
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 7.8e-113 411.0 298 73.2
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 3.9e-112 408.7 298 73.8
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 6.6e-112 407.9 299 72.6
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 3.3e-111 405.6 300 70.7
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 3.3e-111 405.6 298 72.1
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 4.3e-111 405.2 301 72.1
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 7.3e-111 404.4 298 71.5
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 1.3e-110 403.7 298 72.5
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 1.6e-110 403.3 298 71.5
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.6e-110 403.3 301 72.8
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 2.1e-110 402.9 299 71.6
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 2.1e-110 402.9 299 72.2
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 2.1e-110 402.9 300 72.3
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 2.1e-110 402.9 302 71.5
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 2.1e-110 402.9 302 72.8
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 3.6e-110 402.1 228 86.8
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 4.8e-110 401.7 299 72.2
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 8.1e-110 401.0 299 72.6
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 8.1e-110 401.0 299 72.6
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 4.0e-109 398.7 299 72.2
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 4.0e-109 398.7 299 72.2
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 4.0e-109 398.7 299 72.2
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 6.9e-109 397.9 300 71.0
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 1.5e-108 396.7 299 71.6
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 1.5e-108 396.7 299 69.9
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 2.0e-108 396.4 308 69.8
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 2.0e-108 396.4 241 84.2
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 2.6e-108 396.0 298 71.1
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 2.6e-108 396.0 298 71.8
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 1.6e-105 386.7 301 69.4
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 2.7e-105 386.0 301 71.4
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 2.3e-104 382.9 264 75.0
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 3.0e-104 382.5 236 81.8
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 8.7e-104 380.9 300 71.0
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 1.8e-101 373.2 289 73.7
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 1.7e-99 366.7 234 79.1
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 8.4e-99 364.4 300 69.3
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.4e-92 342.4 230 74.3
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 5.8e-92 341.7 226 75.7
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 6.5e-91 338.2 205 82.0
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 2.7e-89 332.8 286 64.7
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 7.9e-89 331.3 234 71.8
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.3e-88 330.5 225 73.3
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 2.4e-85 319.7 224 72.3
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 3.8e-83 312.4 225 69.8
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 3.4e-76 289.3 203 69.0
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.7e-75 287.0 215 73.5
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 2.1e-73 280.0 226 62.8
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 3.3e-63 246.1 137 86.9
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 4.5e-60 235.7 144 78.5
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 5.5e-50 202.2 229 44.1
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 2.3e-48 196.8 202 48.0
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 1.3e-38 164.5 227 40.1
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 4.1e-37 159.5 89 89.9
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 7.0e-37 158.7 86 89.5
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 4.5e-36 156.0 83 94.0
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 4.3e-26 122.9 64 90.6
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 2.3e-11 73.9 87 52.9


User provided reference genes

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