Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 3.2e-136 488.4 244 100.0
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 1.5e-125 453.0 325 75.1
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 4.4e-122 441.4 268 84.0
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 6.6e-118 427.6 267 82.4
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 6.0e-111 404.4 269 78.1
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 7.1e-96 354.4 248 72.6
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 7.4e-93 344.4 267 67.4
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 1.3e-92 343.6 263 70.0
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 1.5e-90 336.7 270 68.1
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 4.9e-89 331.6 262 66.4
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 1.1e-88 330.5 261 69.0
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 1.1e-88 330.5 254 67.3
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 2.5e-88 329.3 269 65.8
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 3.2e-88 328.9 233 72.1
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 5.5e-88 328.2 260 67.7
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 2.7e-87 325.9 261 67.0
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 7.9e-87 324.3 271 65.3
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 7.9e-87 324.3 254 67.3
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 7.9e-87 324.3 213 74.2
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 1.3e-86 323.6 270 64.8
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 1.3e-86 323.6 260 66.5
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 1.8e-86 323.2 269 63.2
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 1.8e-86 323.2 271 63.8
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 2.3e-86 322.8 219 72.6
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 3.9e-86 322.0 219 72.1
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 3.9e-86 322.0 274 65.3
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 6.7e-86 321.2 216 74.1
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 8.7e-86 320.9 270 65.9
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 8.7e-86 320.9 224 70.5
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.1e-85 320.5 219 72.6
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 1.5e-85 320.1 261 67.4
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 1.5e-85 320.1 271 63.5
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.5e-85 319.3 255 65.5
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 3.3e-85 318.9 268 63.8
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 3.3e-85 318.9 263 65.8
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 3.3e-85 318.9 272 64.7
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 5.7e-85 318.2 239 68.6
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 7.4e-85 317.8 270 65.6
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 7.4e-85 317.8 186 80.6
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 2.8e-84 315.8 275 64.7
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 4.8e-84 315.1 224 70.1
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 2.4e-83 312.8 268 64.9
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 3.1e-83 312.4 258 64.7
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 6.9e-83 311.2 269 62.8
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 9.0e-83 310.8 231 70.1
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 2.0e-82 309.7 261 63.2
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 2.6e-82 309.3 216 70.8
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 5.9e-82 308.1 290 60.0
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 7.6e-82 307.8 220 68.6
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 1.7e-81 306.6 270 61.9
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 1.7e-81 306.6 219 69.9
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 2.2e-81 306.2 218 71.1
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 1.9e-80 303.1 272 61.4
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 2.5e-80 302.8 215 70.7
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 2.5e-80 302.8 279 60.9
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 5.5e-80 301.6 225 67.6
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 5.5e-80 301.6 216 69.9
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 5.5e-80 301.6 217 70.5
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.1e-79 299.7 256 62.9
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 2.1e-79 299.7 290 56.6
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 2.1e-79 299.7 216 69.4
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 2.7e-79 299.3 272 62.9
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 3.6e-79 298.9 259 61.8
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 1.0e-78 297.4 213 69.5
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 1.0e-78 297.4 231 67.5
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 1.0e-78 297.4 231 67.5
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 1.4e-78 297.0 255 60.4
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 1.4e-78 297.0 271 61.6
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 1.8e-78 296.6 217 69.6
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 3.9e-78 295.4 213 69.0
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 3.9e-78 295.4 217 69.1
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 6.7e-78 294.7 247 63.2
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 8.8e-78 294.3 255 61.6
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 6.3e-76 288.1 262 58.0
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 1.8e-75 286.6 251 62.5
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 2.0e-74 283.1 237 61.6
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 5.9e-74 281.6 239 64.0
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 5.9e-74 281.6 247 64.0
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 1.0e-73 280.8 243 60.5
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 2.2e-73 279.6 229 62.4
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 2.9e-73 279.3 205 69.8
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 1.2e-71 273.9 180 74.4
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 4.7e-71 271.9 215 64.7
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 8.8e-70 267.7 230 61.7
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 2.0e-69 266.5 255 60.8
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 7.4e-69 264.6 264 56.1
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 6.3e-68 261.5 260 56.5
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 1.2e-66 257.3 315 51.1
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 1.5e-66 256.9 218 65.1
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.0e-65 254.2 175 72.0
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 6.5e-65 251.5 225 62.7
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 7.2e-64 248.1 170 70.0
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 4.8e-60 235.3 175 70.9
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.1e-59 234.2 181 70.7
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 1.2e-58 230.7 167 73.1
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 2.0e-58 229.9 226 54.0
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 7.7e-58 228.0 191 58.6
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 1.7e-57 226.9 163 74.2
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 1.5e-56 223.8 176 68.8
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 9.4e-56 221.1 189 60.8
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 1.0e-54 217.6 186 58.1
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 8.2e-52 208.0 162 67.9
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 6.5e-49 198.4 269 48.0
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 5.7e-45 185.3 209 47.8
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 5.9e-42 175.3 179 49.7
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 7.2e-40 168.3 179 47.5
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 1.8e-38 163.7 141 61.7
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 5.2e-38 162.2 152 55.9
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.2e-37 161.0 81 91.4
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 3.7e-36 156.0 81 88.9
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 6.3e-36 155.2 93 76.3
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 1.4e-35 154.1 239 41.4
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 1.8e-35 153.7 117 66.7
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 7.8e-34 148.3 76 89.5
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 5.0e-33 145.6 180 46.1
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 1.7e-25 120.6 152 51.3
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 9.5e-24 114.8 178 37.6
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.6e-23 114.0 58 87.9
MSTRG.5122 Avicennia marina HOM05D006169 ORTHO05D007698 6.8e-22 108.6 70 71.4
CSS0014495 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 3.5e-18 96.3 111 55.0
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 1.7e-17 94.0 46 91.3
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.6e-15 87.4 45 84.4
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 2.1e-15 87.0 64 64.1
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 6.2e-15 85.5 116 35.3
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 2.0e-13 80.5 44 79.5
Os01g0343500 Oryza sativa ssp. japonica HOM05D006169 ORTHO05D007698 5.4e-11 72.4 116 43.1


User provided reference genes

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