Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G014570 Citrullus lanatus HOM05D008155 ORTHO05D010411 1.5e-122 443.0 241 100.0
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 3.3e-69 265.8 164 82.3
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 1.9e-64 250.0 169 79.9
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 1.5e-42 177.2 167 62.3
Sed0026568 Sechium edule HOM05D008155 ORTHO05D010411 2.1e-31 140.2 122 63.9
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 8.8e-14 81.6 131 39.7
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 2.0e-13 80.5 112 43.8
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 2.0e-13 80.5 109 44.0
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 1.3e-12 77.8 112 42.9
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 2.8e-12 76.6 117 41.0
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 1.8e-11 73.9 112 42.0
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 7.0e-11 72.0 118 39.8
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 2.0e-10 70.5 112 42.0
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 2.7e-10 70.1 124 41.1
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 5.9e-10 68.9 117 41.0
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 5.9e-10 68.9 140 37.9
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 1.0e-09 68.2 123 42.3
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 2.2e-09 67.0 112 40.2
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 2.2e-09 67.0 112 39.3
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 5.0e-09 65.9 133 39.1
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 5.0e-09 65.9 128 39.8
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 5.0e-09 65.9 133 36.1
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 8.5e-09 65.1 158 34.2
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 8.5e-09 65.1 158 34.2
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 1.1e-08 64.7 55 58.2
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 1.5e-08 64.3 122 38.5
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 2.5e-08 63.5 121 35.5
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 3.2e-08 63.2 145 33.1
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 4.2e-08 62.8 108 38.0
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 2.7e-07 60.1 153 34.6
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 2.7e-07 60.1 50 60.0
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.7e-07 60.1 132 33.3
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.7e-07 60.1 132 33.3
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 3.6e-07 59.7 51 58.8
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 3.6e-07 59.7 62 48.4
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 4.7e-07 59.3 125 35.2
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 4.7e-07 59.3 52 59.6
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 6.1e-07 58.9 74 48.6
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 6.1e-07 58.9 105 39.0
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.4e-06 57.8 59 47.5
Atru.chr12.1502 Acer truncatum HOM05D008155 ORTHO05D010411 1.8e-06 57.4 51 56.9
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 2.3e-06 57.0 68 41.2
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 3.0e-06 56.6 110 34.5
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 3.0e-06 56.6 114 36.0
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 4.0e-06 56.2 37 67.6
Rhsim11G0107200 Rhododendron simsii HOM05D008155 ORTHO05D010411 4.0e-06 56.2 57 47.4
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 4.0e-06 56.2 115 36.5


User provided reference genes

Program Settings