Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G013580 Citrullus lanatus HOM05D009842 ORTHO05D011134 4.0e-93 344.7 175 100.0
MELO3C023815.2 Cucumis melo HOM05D009842 ORTHO05D011134 2.5e-79 298.9 172 87.2
CsaV3_5G006590 Cucumis sativus L. HOM05D009842 ORTHO05D011134 1.7e-78 296.2 175 86.3
Sed0020761 Sechium edule HOM05D009842 ORTHO05D011134 3.9e-72 275.0 175 81.7
Nitab4.5_0000914g0210 Nicotiana tabacum HOM05D009842 ORTHO05D011134 3.7e-46 188.7 174 56.3
Dinv31397 Davidia involucrata HOM05D009842 ORTHO05D011134 7.0e-45 184.5 167 59.3
PGSC0003DMG400023509 Solanum tuberosum HOM05D009842 ORTHO05D011134 2.7e-44 182.6 176 54.5
Prupe.2G225500 Prunus persica HOM05D009842 ORTHO05D011134 7.7e-44 181.0 167 58.7
Solyc05g054840.3 Solanum lycopersicum HOM05D009842 ORTHO05D011134 1.3e-43 180.3 175 55.4
Nitab4.5_0011080g0030 Nicotiana tabacum HOM05D000454 ORTHO05D000591 1.7e-43 179.9 174 53.4
Sopen05g033310 Solanum pennellii HOM05D009842 ORTHO05D011134 3.8e-43 178.7 175 54.9
MD01G1118400 Malus domestica HOM05D009842 ORTHO05D011134 2.1e-41 172.9 167 56.3
PGR142G3647 Punica granatum HOM05D009842 ORTHO05D011134 4.7e-41 171.8 169 50.9
TAR636G0871 Trochodendron aralioides HOM05D009842 ORTHO05D011134 4.0e-40 168.7 170 56.5
Actinidia38217 Actinidia chinensis HOM05D009842 ORTHO05D011134 1.3e-38 163.7 170 54.1
PSO339G5653 Papaver somniferum HOM05D009842 ORTHO05D011134 5.0e-35 151.8 169 49.7
PSO384G1346 Papaver somniferum HOM05D009842 ORTHO05D011134 8.6e-35 151.0 169 50.9
Nn2g10535 Nelumbo nucifera HOM05D009842 ORTHO05D011134 2.5e-34 149.4 182 48.4
TWI38G0364 Tripterygium wilfordii HOM05D009842 ORTHO05D011134 3.3e-34 149.1 147 52.4
Cc02_g08540 Coffea canephora HOM05D009842 ORTHO05D011134 4.0e-32 142.1 183 47.0
CSS0009421 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 7.8e-28 127.9 164 47.0
CSS0024730 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 3.6e-25 119.0 182 44.0
HPP92_006590 Vanilla planifolia HOM05D009842 ORTHO05D011134 6.2e-17 91.7 165 35.8
Peaxi162Scf00015g02512 Petunia axillaris HOM05D009842 ORTHO05D011134 2.0e-15 86.7 174 33.9
Os05g0120800 Oryza sativa ssp. japonica HOM05D009842 ORTHO05D011134 4.1e-13 79.0 152 36.8
Mapoly0003s0076 Marchantia polymorpha HOM05D013267 ORTHO05D011134 3.5e-12 75.9 215 28.8
Zm00001eb265980 Zea mays HOM05D009842 ORTHO05D011134 6.0e-12 75.1 161 32.3
SMO165G0144 Selaginella moellendorffii HOM05D013267 ORTHO05D011134 3.0e-11 72.8 218 29.8
Actinidia02992 Actinidia chinensis HOM05D009842 ORTHO05D011134 1.9e-10 70.1 172 31.4
AagrBONN_evm.TU.Sc2ySwM_368.1565 Anthoceros agrestis HOM05D013267 ORTHO05D011134 1.9e-10 70.1 221 26.7
Cre16.g688450 Chlamydomonas reinhardtii HOM05D013267 ORTHO05D011134 1.5e-07 60.5 214 26.6


User provided reference genes

Program Settings