Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 4.2e-55 218.4 168 100.0
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 6.5e-48 194.5 168 92.3
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 6.7e-45 184.5 168 90.5
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 3.6e-38 162.2 169 82.8
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 8.0e-22 107.8 171 67.8
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 4.0e-21 105.5 168 65.5
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 2.6e-20 102.8 166 68.1
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 5.7e-20 101.7 149 70.5
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 1.3e-19 100.5 166 65.1
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 1.7e-19 100.1 135 76.3
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.7e-19 99.0 167 66.5
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 3.7e-19 99.0 168 63.7
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 8.3e-19 97.8 136 72.8
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 8.3e-19 97.8 166 62.7
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 1.4e-18 97.1 165 49.1
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.8e-18 96.7 167 66.5
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 3.1e-18 95.9 169 58.6
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 4.1e-18 95.5 166 59.6
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 4.1e-18 95.5 169 53.8
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 5.4e-18 95.1 166 62.0
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 7.0e-18 94.7 129 71.3
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 7.0e-18 94.7 150 63.3
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 7.0e-18 94.7 150 63.3
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 9.2e-18 94.4 157 63.7
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 9.2e-18 94.4 157 63.7
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 9.2e-18 94.4 171 64.3
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 9.2e-18 94.4 127 69.3
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.6e-17 93.6 169 55.0
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 2.0e-17 93.2 126 70.6
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 2.7e-17 92.8 157 59.2
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 2.7e-17 92.8 142 66.9
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 3.5e-17 92.4 171 58.5
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 3.5e-17 92.4 125 67.2
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 4.5e-17 92.0 137 68.6
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 4.5e-17 92.0 137 68.6
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 4.5e-17 92.0 143 57.3
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 5.9e-17 91.7 167 64.7
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 5.9e-17 91.7 167 58.7
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 5.9e-17 91.7 166 61.4
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 7.7e-17 91.3 154 61.7
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 7.7e-17 91.3 157 63.1
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 7.7e-17 91.3 171 63.7
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 1.0e-16 90.9 126 75.4
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.0e-16 90.9 172 61.6
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 1.0e-16 90.9 157 62.4
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.0e-16 90.9 154 61.0
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 1.3e-16 90.5 154 61.0
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.3e-16 90.5 167 57.5
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 1.7e-16 90.1 157 61.1
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 1.7e-16 90.1 146 67.1
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 2.3e-16 89.7 157 61.1
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 3.8e-16 89.0 157 61.8
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 6.6e-16 88.2 127 74.0
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 8.6e-16 87.8 166 58.4
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.1e-15 87.4 143 59.4
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 1.1e-15 87.4 137 68.6
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.1e-15 87.4 163 62.0
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 1.5e-15 87.0 146 58.2
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 1.5e-15 87.0 169 56.2
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 1.5e-15 87.0 125 65.6
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.5e-15 87.0 164 62.2
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.9e-15 86.7 163 54.6
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 2.5e-15 86.3 171 60.2
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 2.5e-15 86.3 136 71.3
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 3.3e-15 85.9 135 71.9
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 3.3e-15 85.9 126 68.3
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 4.3e-15 85.5 139 66.9
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 5.6e-15 85.1 136 66.2
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 9.5e-15 84.3 146 52.7
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 9.5e-15 84.3 148 64.9
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 1.2e-14 84.0 167 49.1
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 1.6e-14 83.6 166 52.4
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 2.1e-14 83.2 166 51.8
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.0e-13 80.9 146 53.4
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 1.8e-13 80.1 142 55.6
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 1.8e-13 80.1 146 61.0
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 3.0e-13 79.3 137 65.7
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 5.2e-13 78.6 149 63.8
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 5.2e-13 78.6 127 54.3
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 6.8e-13 78.2 165 53.3
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.8e-13 78.2 165 60.6
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 8.9e-13 77.8 163 45.4
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 1.2e-12 77.4 168 54.8
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 2.0e-12 76.6 126 68.3
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 3.4e-12 75.9 216 51.9
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.4e-12 75.5 135 62.2
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 9.8e-12 74.3 165 56.4
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 1.3e-11 73.9 165 56.4
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 1.3e-11 73.9 139 61.2
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 3.7e-11 72.4 130 43.8
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 4.9e-11 72.0 114 64.0
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 1.4e-10 70.5 140 52.1
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 1.6e-09 67.0 130 63.8
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 2.0e-09 66.6 90 48.9
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.0e-08 64.3 172 48.8
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.3e-08 63.9 100 69.0
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 2.3e-08 63.2 175 47.4
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 1.9e-07 60.1 149 54.4
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 1.9e-07 60.1 105 62.9
Rhsim03G0179900 Rhododendron simsii HOM05D003145 ORTHO05D003586 3.6e-06 55.8 31 83.9


User provided reference genes

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