Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.2e-70 269.6 132 100.0
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.8e-32 142.9 97 75.3
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 5.7e-31 137.9 90 74.4
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 6.3e-30 134.4 90 73.3
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 4.7e-25 118.2 93 62.4
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 5.7e-23 111.3 80 72.5
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.1e-21 107.1 80 68.8
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 6.9e-21 104.4 81 63.0
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 9.1e-21 104.0 81 61.7
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 9.1e-21 104.0 81 61.7
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 9.1e-21 104.0 81 61.7
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.2e-20 103.6 81 60.5
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 4.5e-20 101.7 81 61.7
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 4.5e-20 101.7 81 63.0
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.8e-19 98.6 81 59.3
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 3.8e-19 98.6 81 60.5
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 6.5e-19 97.8 81 59.3
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 6.5e-19 97.8 81 60.5
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 8.5e-19 97.4 81 59.3
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 8.5e-19 97.4 81 59.3
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 8.5e-19 97.4 81 59.3
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 1.1e-18 97.1 81 61.7
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 1.1e-18 97.1 78 60.3
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.4e-18 96.7 83 57.8
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.4e-18 96.7 83 57.8
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 1.4e-18 96.7 81 58.0
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 1.9e-18 96.3 81 59.3
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 2.5e-18 95.9 81 60.5
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 3.2e-18 95.5 78 61.5
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 3.2e-18 95.5 81 58.0
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 3.2e-18 95.5 81 56.8
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 3.2e-18 95.5 78 59.0
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 3.2e-18 95.5 82 54.9
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 5.5e-18 94.7 80 57.5
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 7.2e-18 94.4 81 58.0
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 7.2e-18 94.4 78 56.4
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 9.4e-18 94.0 79 57.0
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.2e-17 93.6 81 58.0
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.2e-17 93.6 81 58.0
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.2e-17 93.6 81 58.0
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 1.2e-17 93.6 78 59.0
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 1.2e-17 93.6 81 56.8
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 1.2e-17 93.6 81 55.6
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 1.2e-17 93.6 81 55.6
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 2.1e-17 92.8 81 56.8
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 2.7e-17 92.4 81 56.8
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 3.6e-17 92.0 81 56.8
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 3.6e-17 92.0 78 60.3
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 6.1e-17 91.3 82 54.9
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 6.1e-17 91.3 78 53.8
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 6.1e-17 91.3 79 57.0
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 8.0e-17 90.9 78 57.7
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 1.8e-16 89.7 80 53.8
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 1.8e-16 89.7 78 55.1
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 1.8e-16 89.7 76 56.6
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 1.8e-16 89.7 80 55.0
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 2.3e-16 89.4 81 54.3
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 2.3e-16 89.4 80 55.0
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 3.0e-16 89.0 78 57.7
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 3.9e-16 88.6 78 55.1
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 3.9e-16 88.6 78 56.4
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 5.2e-16 88.2 78 55.1
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 6.7e-16 87.8 75 56.0
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 8.8e-16 87.4 81 53.1
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 8.8e-16 87.4 81 55.6
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 8.8e-16 87.4 80 53.8
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.1e-15 87.0 81 53.1
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 1.1e-15 87.0 81 53.1
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 1.1e-15 87.0 81 53.1
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 1.1e-15 87.0 80 53.8
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 1.1e-15 87.0 115 41.7
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.5e-15 86.7 78 53.8
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.5e-15 86.7 78 52.6
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 1.5e-15 86.7 83 53.0
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 1.5e-15 86.7 82 52.4
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 1.5e-15 86.7 81 54.3
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 2.0e-15 86.3 81 51.9
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 2.6e-15 85.9 82 53.7
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 2.6e-15 85.9 78 53.8
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 2.6e-15 85.9 75 54.7
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 3.3e-15 85.5 81 53.1
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 3.3e-15 85.5 81 53.1
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 3.3e-15 85.5 81 50.6
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 3.3e-15 85.5 80 56.2
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 4.4e-15 85.1 78 52.6
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 4.4e-15 85.1 75 53.3
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 4.4e-15 85.1 75 53.3
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.3e-14 83.6 81 50.6
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 1.3e-14 83.6 83 53.0
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 1.3e-14 83.6 79 54.4
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.7e-14 83.2 78 48.7
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 2.8e-14 82.4 80 51.2
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 3.7e-14 82.0 78 50.0
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 3.7e-14 82.0 78 52.6
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 4.8e-14 81.6 81 50.6
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 4.8e-14 81.6 78 52.6
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 6.3e-14 81.3 78 52.6
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 6.3e-14 81.3 82 52.4
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 8.2e-14 80.9 78 51.3
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 8.2e-14 80.9 81 51.9
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 1.1e-13 80.5 81 48.1
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 1.8e-13 79.7 80 48.8
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 7.0e-13 77.8 78 51.3
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 9.1e-13 77.4 82 48.8
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 1.2e-12 77.0 82 51.2
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 1.6e-12 76.6 75 49.3
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 4.5e-12 75.1 53 64.2
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 1.0e-11 73.9 78 47.4
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 3.8e-11 72.0 58 53.4
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 3.8e-11 72.0 81 48.1
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 9.7e-07 57.4 80 36.2
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 9.7e-07 57.4 79 39.2
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 2.2e-06 56.2 84 38.1


User provided reference genes

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