Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 7.7e-152 540.4 267 100.0
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 4.1e-145 518.1 261 96.6
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 1.5e-144 516.2 261 96.2
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 3.4e-131 471.9 258 89.1
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 2.7e-112 409.1 261 74.7
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 2.7e-112 409.1 261 73.2
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 3.5e-112 408.7 261 73.6
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 3.5e-112 408.7 261 73.9
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 1.0e-111 407.1 261 73.6
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 1.7e-111 406.4 261 73.2
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 3.9e-111 405.2 261 72.8
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 3.9e-111 405.2 261 72.4
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 8.6e-111 404.1 261 72.8
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 4.3e-110 401.7 261 73.2
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 5.6e-110 401.4 261 71.6
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 2.1e-109 399.4 261 71.3
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 4.7e-109 398.3 262 71.8
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.4e-108 396.7 261 70.9
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 1.4e-108 396.7 264 73.5
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 1.4e-108 396.7 261 71.6
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 2.3e-108 396.0 269 72.1
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 3.1e-108 395.6 264 72.0
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 3.1e-108 395.6 260 71.2
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 3.1e-108 395.6 264 72.0
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 4.0e-108 395.2 262 71.4
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 5.2e-108 394.8 269 72.1
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 5.2e-108 394.8 265 72.1
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 6.8e-108 394.4 271 70.1
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 8.9e-108 394.0 261 72.4
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 2.6e-107 392.5 261 70.9
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 3.4e-107 392.1 263 72.2
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 5.8e-107 391.3 291 65.6
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 1.7e-106 389.8 264 72.0
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 2.9e-106 389.0 290 66.2
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 3.7e-106 388.7 260 70.8
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 6.4e-106 387.9 260 70.4
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 8.3e-106 387.5 262 72.1
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 1.4e-105 386.7 261 70.9
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 1.9e-105 386.3 266 70.7
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 1.9e-105 386.3 262 70.6
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.2e-105 385.6 265 68.7
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 2.0e-104 382.9 262 71.8
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 4.6e-104 381.7 263 69.2
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 1.0e-103 380.6 260 68.8
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 3.0e-103 379.0 239 73.2
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 8.6e-103 377.5 264 68.6
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 1.9e-102 376.3 250 72.4
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 4.3e-102 375.2 261 66.3
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 4.3e-102 375.2 263 69.2
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 7.3e-102 374.4 265 70.9
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 9.5e-102 374.0 261 67.8
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 8.1e-101 370.9 260 68.1
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 2.3e-100 369.4 260 68.1
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 4.0e-100 368.6 261 70.9
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 2.0e-99 366.3 264 67.0
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 2.6e-99 365.9 261 67.0
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 4.4e-99 365.2 261 66.3
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 2.9e-98 362.5 258 69.8
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 4.9e-98 361.7 256 68.0
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 4.9e-98 361.7 256 68.0
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 6.4e-98 361.3 262 67.2
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 6.4e-98 361.3 277 61.4
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 6.4e-98 361.3 256 67.6
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 1.1e-97 360.5 255 69.4
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 3.2e-97 359.0 222 73.9
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 1.2e-96 357.1 258 66.7
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.6e-96 356.7 258 67.1
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 1.6e-96 356.7 256 66.8
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 1.6e-96 356.7 219 76.3
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 2.1e-96 356.3 268 64.2
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 7.8e-96 354.4 256 68.4
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.7e-95 353.2 257 67.3
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 3.9e-95 352.1 256 67.2
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 3.9e-95 352.1 256 67.2
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 2.5e-94 349.4 256 65.6
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 1.2e-93 347.1 222 71.6
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.6e-93 346.7 223 72.6
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 8.1e-93 344.4 243 67.9
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 1.1e-92 344.0 261 62.1
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 4.0e-92 342.0 233 70.0
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 2.0e-91 339.7 261 63.2
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 3.4e-91 339.0 266 64.7
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 5.8e-91 338.2 248 66.9
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 5.8e-91 338.2 232 69.4
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 7.6e-91 337.8 244 66.8
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.3e-90 337.0 232 69.4
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 1.7e-90 336.7 233 69.1
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 2.9e-90 335.9 232 68.5
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 3.7e-90 335.5 258 64.7
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 5.4e-89 331.6 262 62.2
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 9.2e-89 330.9 227 70.0
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 2.7e-88 329.3 222 68.9
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 1.3e-87 327.0 259 61.4
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 3.9e-87 325.5 242 63.6
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 8.6e-87 324.3 250 64.4
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 3.3e-86 322.4 266 58.6
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 7.3e-86 321.2 228 64.9
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 2.8e-85 319.3 258 61.2
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 6.2e-85 318.2 242 62.4
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 8.1e-85 317.8 276 59.8
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.1e-84 317.4 231 64.1
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 2.4e-84 316.2 244 61.9
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 3.1e-84 315.8 230 63.9
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.2e-83 313.9 200 73.5
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 2.0e-83 313.2 230 63.5
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 2.6e-83 312.8 230 63.5
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 3.4e-83 312.4 230 63.5
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 3.4e-83 312.4 230 63.5
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 4.4e-83 312.0 241 61.0
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 7.6e-83 311.2 229 66.4
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 7.6e-83 311.2 277 55.6
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 9.9e-83 310.8 267 58.8
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 2.9e-82 309.3 224 64.7
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.4e-81 307.0 194 73.7
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 1.2e-80 303.9 202 67.8
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 2.7e-80 302.8 228 64.5
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 2.7e-80 302.8 195 69.7
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 4.6e-80 302.0 228 63.6
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 4.3e-78 295.4 286 54.9
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 9.6e-78 294.3 228 63.6
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 1.8e-76 290.0 199 67.8
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 4.0e-76 288.9 218 64.7
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 9.0e-76 287.7 202 69.3
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 2.4e-73 279.6 255 56.9
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 4.2e-73 278.9 255 56.5
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.2e-72 277.3 203 67.0
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 1.3e-71 273.9 226 56.2
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 2.3e-71 273.1 266 56.0
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.3e-69 267.3 200 63.0
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 8.1e-69 264.6 231 53.7
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.5e-67 260.4 236 52.1
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.3e-66 257.3 229 54.1
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 3.2e-65 252.7 202 62.4
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 2.1e-64 250.0 261 51.0
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.5e-62 243.8 166 69.9
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 2.0e-59 233.4 229 50.7
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 1.4e-57 227.3 256 46.9
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 7.9e-56 221.5 174 59.8
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 4.5e-51 205.7 226 50.9
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 1.3e-50 204.1 153 61.4
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 1.4e-39 167.5 130 60.8
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 2.8e-37 159.8 266 35.0
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.1e-36 156.4 80 86.2
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 2.6e-35 153.3 224 39.7
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.4e-33 147.5 129 56.6
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 2.4e-28 130.2 249 35.3
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.2e-27 127.9 126 51.6
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.2e-27 127.9 126 51.6
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 1.3e-26 124.4 237 35.9
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.0e-22 110.5 57 80.7
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 1.8e-20 104.0 56 80.4
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 5.7e-14 82.4 75 50.7
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 2.2e-13 80.5 52 69.2
FAN23G0103 Fragaria x ananassa HOM05D004652 ORTHO05D198901 1.0e-07 61.6 121 36.4
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 2.3e-07 60.5 28 85.7
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 6.8e-07 58.9 29 86.2


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