Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G010580 Citrullus lanatus HOM05D002300 ORTHO05D002340 1.1e-65 253.1 124 100.0
CsaV3_6G009800 Cucumis sativus L. HOM05D002300 ORTHO05D002340 9.8e-09 63.9 49 61.2
Sed0006734 Sechium edule HOM05D002300 ORTHO05D002340 3.7e-08 62.0 49 61.2
MELO3C013465.2 Cucumis melo HOM05D002300 ORTHO05D002340 4.9e-08 61.6 49 59.2
ClCG02G010590 Citrullus lanatus HOM05D002300 ORTHO05D002340 8.3e-08 60.8 49 59.2
AUR62025102 Chenopodium quinoa HOM05D002300 ORTHO05D002340 2.4e-07 59.3 49 53.1
Cfa014189 Carpinus fangiana HOM05D002300 ORTHO05D002340 3.1e-07 58.9 49 57.1
Haze_12566 Corylus avellana HOM05D002300 ORTHO05D002340 3.1e-07 58.9 49 57.1
Nitab4.5_0000505g0030 Nicotiana tabacum HOM05D002300 ORTHO05D002340 4.1e-07 58.5 50 56.0
Nitab4.5_0006205g0010 Nicotiana tabacum HOM05D002300 ORTHO05D002340 4.1e-07 58.5 50 56.0
Peaxi162Scf00000g06117 Petunia axillaris HOM05D002300 ORTHO05D002340 4.1e-07 58.5 50 56.0
MBI15_g37118_MAGBIO Magnolia biondii HOM05D002300 ORTHO05D002340 5.4e-07 58.2 49 55.1
Actinidia18822 Actinidia chinensis HOM05D002300 ORTHO05D002340 7.0e-07 57.8 49 55.1
Cpa.g.sc136.82 Carica papaya HOM05D002300 ORTHO05D002340 7.0e-07 57.8 49 55.1
Dinv26628 Davidia involucrata HOM05D002300 ORTHO05D002340 7.0e-07 57.8 49 55.1
Lsat_1_v5_gn_9_103280 Lactuca sativa HOM05D002300 ORTHO05D002340 7.0e-07 57.8 49 55.1
MD09G1134400 Malus domestica HOM05D002300 ORTHO05D002340 7.0e-07 57.8 49 55.1
Prupe.3G192300 Prunus persica HOM05D002300 ORTHO05D002340 7.0e-07 57.8 49 55.1
PGR044G2613 Punica granatum HOM05D002300 ORTHO05D002340 9.2e-07 57.4 49 57.1
CANSAT64G2299 Cannabis sativa HOM05D002300 ORTHO05D002340 1.2e-06 57.0 49 57.1
CAN.G164.9 Capsicum annuum HOM05D002300 ORTHO05D002340 1.2e-06 57.0 50 52.0
THA.LOC104808830 Tarenaya hassleriana HOM05D002300 ORTHO05D002340 1.2e-06 57.0 49 51.0
ECA240G1168 Erigeron canadensis HOM05D006012 ORTHO05D007315 1.6e-06 56.6 49 55.1
MD17G1123300 Malus domestica HOM05D002300 ORTHO05D002340 1.6e-06 56.6 49 55.1
QL04p065718 Quercus lobata HOM05D002300 ORTHO05D002340 1.6e-06 56.6 49 53.1
CSS0035149 Camellia sinensis var. sinensis HOM05D002300 ORTHO05D002340 2.0e-06 56.2 49 55.1
CARHR217980 Cardamine hirsuta HOM05D002300 ORTHO05D002340 2.0e-06 56.2 49 51.0
Lj1A804T49 Lonicera japonica HOM05D002300 ORTHO05D002340 2.0e-06 56.2 49 55.1
Lj6g0001194 Lotus japonicus HOM05D002300 ORTHO05D002340 2.0e-06 56.2 49 55.1
Medtr3g079310 Medicago truncatula HOM05D002300 ORTHO05D002340 2.0e-06 56.2 49 55.1
Psat5g112640 Pisum sativum HOM05D002300 ORTHO05D002340 2.0e-06 56.2 49 55.1
Solyc12g011050.2 Solanum lycopersicum HOM05D002300 ORTHO05D002340 2.0e-06 56.2 50 52.0
Sopen12g006420 Solanum pennellii HOM05D002300 ORTHO05D002340 2.0e-06 56.2 50 52.0
TPR.G14343 Trifolium pratense HOM05D002300 ORTHO05D002340 2.0e-06 56.2 49 55.1
CSS0020263 Camellia sinensis var. sinensis HOM05D002300 ORTHO05D002340 2.7e-06 55.8 70 42.9
AUR62037155 Chenopodium quinoa HOM05D002300 ORTHO05D002340 2.7e-06 55.8 49 51.0
THA.LOC104815382 Tarenaya hassleriana HOM05D002300 ORTHO05D002340 2.7e-06 55.8 49 49.0
AL9U12140 Arabidopsis lyrata HOM05D002300 ORTHO05D002340 3.5e-06 55.5 49 49.0
EL10Ac9g22353 Beta vulgaris HOM05D002300 ORTHO05D002340 3.5e-06 55.5 49 51.0
CiPaw.04G198300 Carya illinoinensis HOM05D002300 ORTHO05D002340 3.5e-06 55.5 49 53.1
CDE06G1373 Ceratophyllum demersum HOM05D002300 ORTHO05D002340 3.5e-06 55.5 49 51.0
TAR629G0670 Trochodendron aralioides HOM05D002300 ORTHO05D002340 3.5e-06 55.5 49 53.1
Ca_16234_v3 Cicer arietinum L. HOM05D002300 ORTHO05D002340 4.5e-06 55.1 49 53.1
Hma1.2p1_1373F.1_g278720 Hydrangea macrophylla HOM05D002300 ORTHO05D002340 4.5e-06 55.1 49 53.1
RcHm_v2.0_Chr2g0155211 Rosa chinensis HOM05D002300 ORTHO05D002340 4.5e-06 55.1 49 53.1
TWI18G0351 Tripterygium wilfordii HOM05D002300 ORTHO05D002340 4.5e-06 55.1 49 53.1
unitig_8.g3849 Utricularia gibba HOM05D002300 ORTHO05D002340 4.5e-06 55.1 49 53.1
GSVIVG01030143001 Vitis vinifera HOM05D000872 ORTHO05D002340 4.5e-06 55.1 49 53.1
arahy.Tifrunner.gnm1.ann1.2RB1YT Arachis hypogaea HOM05D002300 ORTHO05D002340 5.9e-06 54.7 49 53.1
Lalb_Chr10g0093501 Lupinus albus HOM05D002300 ORTHO05D002340 5.9e-06 54.7 49 53.1
Manes.12G068200 Manihot esculenta HOM05D002300 ORTHO05D002340 5.9e-06 54.7 49 53.1
Nn1g07661 Nelumbo nucifera HOM05D002300 ORTHO05D002340 5.9e-06 54.7 49 53.1
AT4G12640 Arabidopsis thaliana HOM05D002300 ORTHO05D002340 7.7e-06 54.3 49 49.0
BcaB02g06635 Brassica carinata HOM05D002300 ORTHO05D002340 7.7e-06 54.3 49 49.0
BcaC05g25562 Brassica carinata HOM05D002300 ORTHO05D002340 7.7e-06 54.3 49 49.0
A06p12490 Brassica napus HOM05D002300 ORTHO05D002340 7.7e-06 54.3 49 49.0
BolC5t30194H Brassica oleracea HOM05D002300 ORTHO05D002340 7.7e-06 54.3 49 49.0
Ciclev10014369m.g Citrus clementina HOM05D002300 ORTHO05D002340 7.7e-06 54.3 49 53.1


User provided reference genes

Program Settings