Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G009990 Citrullus lanatus HOM05D006820 ORTHO05D008526 1.3e-91 339.7 173 100.0
Sed0016165 Sechium edule HOM05D006820 ORTHO05D008526 1.6e-78 296.2 171 88.3
CsaV3_5G012520 Cucumis sativus L. HOM05D006820 ORTHO05D008526 4.2e-74 281.6 173 80.9
Potri.009G165400 Populus trichocarpa HOM05D006820 ORTHO05D008526 1.0e-64 250.4 171 72.5
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 1.8e-64 249.6 173 71.7
GSVIVG01023895001 Vitis vinifera HOM05D006820 ORTHO05D008526 1.8e-64 249.6 172 71.5
QL11p053925 Quercus lobata HOM05D006820 ORTHO05D008526 5.1e-64 248.1 169 73.4
Lj9A405G64 Lonicera japonica HOM05D006820 ORTHO05D008526 1.1e-63 246.9 173 69.9
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 1.5e-63 246.5 173 69.9
Gohir.A12G033700 Gossypium hirsutum HOM05D006820 ORTHO05D008526 1.9e-63 246.1 169 72.2
TAR625G0986 Trochodendron aralioides HOM05D006820 ORTHO05D008526 1.9e-63 246.1 173 69.9
Ciclev10029216m.g Citrus clementina HOM05D006820 ORTHO05D008526 3.3e-63 245.4 172 71.5
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 5.6e-63 244.6 172 69.8
Gorai.008G040700 Gossypium raimondii HOM05D006820 ORTHO05D008526 2.1e-62 242.7 172 70.3
CiPaw.06G118200 Carya illinoinensis HOM05D006820 ORTHO05D008526 4.8e-62 241.5 171 69.6
Manes.04G064800 Manihot esculenta HOM05D006820 ORTHO05D008526 4.8e-62 241.5 173 69.4
PGR142G1762 Punica granatum HOM05D006820 ORTHO05D008526 8.1e-62 240.7 170 68.2
Eucgr.I01511 Eucalyptus grandis HOM05D006820 ORTHO05D008526 1.4e-61 240.0 171 67.8
CANSAT25G2916 Cannabis sativa HOM05D006820 ORTHO05D008526 3.1e-61 238.8 172 68.0
Haze_02054 Corylus avellana HOM05D006820 ORTHO05D008526 5.3e-61 238.0 168 71.4
Nn6g31730 Nelumbo nucifera HOM05D006820 ORTHO05D008526 6.9e-61 237.7 172 68.6
TPR.G18648 Trifolium pratense HOM05D006820 ORTHO05D008526 6.9e-61 237.7 173 67.1
TWI79G0714 Tripterygium wilfordii HOM05D006820 ORTHO05D008526 9.0e-61 237.3 171 67.3
Atru.chr5.3527 Acer truncatum HOM05D006820 ORTHO05D008526 2.0e-60 236.1 173 67.6
DCAR_015665 Daucus carota HOM05D006820 ORTHO05D008526 2.0e-60 236.1 173 65.3
Lsat_1_v5_gn_8_120400 Lactuca sativa HOM05D006820 ORTHO05D008526 7.6e-60 234.2 174 67.8
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 2.2e-59 232.6 173 64.2
LjContig00081g0000354 Lotus japonicus HOM05D006820 ORTHO05D008526 2.9e-59 232.3 172 65.7
vmacro17294 Vaccinium macrocarpon HOM05D006820 ORTHO05D008526 2.9e-59 232.3 173 65.9
AUR62012929 Chenopodium quinoa HOM05D006820 ORTHO05D008526 4.9e-59 231.5 172 65.1
arahy.Tifrunner.gnm1.ann1.6J1J15 Arachis hypogaea HOM05D006820 ORTHO05D008526 6.5e-59 231.1 172 66.3
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 8.4e-59 230.7 172 66.3
EL10Ac9g21258 Beta vulgaris HOM05D006820 ORTHO05D008526 8.4e-59 230.7 172 65.1
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 8.4e-59 230.7 173 64.2
AUR62011713 Chenopodium quinoa HOM05D006820 ORTHO05D008526 1.1e-58 230.3 172 65.1
CAN.G1725.10 Capsicum annuum HOM05D006820 ORTHO05D008526 1.4e-58 229.9 173 64.2
Migut.B00016 Erythranthe guttata HOM05D006820 ORTHO05D008526 1.4e-58 229.9 173 61.8
Nitab4.5_0011212g0060 Nicotiana tabacum HOM05D006820 ORTHO05D008526 1.4e-58 229.9 173 63.6
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 1.4e-58 229.9 170 67.1
arahy.Tifrunner.gnm1.ann1.696HI2 Arachis hypogaea HOM05D006820 ORTHO05D008526 1.9e-58 229.6 172 66.3
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 3.2e-58 228.8 173 63.6
Glyma.14G001800 Glycine max HOM05D006820 ORTHO05D008526 4.2e-58 228.4 172 66.3
THA.LOC104804082 Tarenaya hassleriana HOM05D006820 ORTHO05D008526 4.2e-58 228.4 173 62.4
Peaxi162Scf00362g00246 Petunia axillaris HOM05D006820 ORTHO05D008526 1.6e-57 226.5 173 63.6
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 1.6e-57 226.5 170 67.1
Oeu021963.1 Olea europaea HOM05D006820 ORTHO05D008526 2.1e-57 226.1 171 64.3
Ah.01g007660 Amaranthus hybridus HOM05D006820 ORTHO05D008526 4.6e-57 224.9 174 63.2
Aqoxy6G01707 Aquilegia oxysepala HOM05D006820 ORTHO05D008526 4.6e-57 224.9 172 68.0
Carub.0007s0026 Capsella rubella HOM05D006820 ORTHO05D008526 6.0e-57 224.6 173 64.2
SGA_v2.0_scaffold58G20319 Striga asiatica HOM05D006820 ORTHO05D008526 1.0e-56 223.8 172 63.4
HanXRQChr14g0459061 Helianthus annuus HOM05D006820 ORTHO05D008526 1.3e-56 223.4 181 63.0
Lalb_Chr10g0095311 Lupinus albus HOM05D006820 ORTHO05D008526 1.3e-56 223.4 172 64.5
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 1.3e-56 223.4 171 67.3
Phvul.008G291600 Phaseolus vulgaris HOM05D006820 ORTHO05D008526 1.3e-56 223.4 172 64.5
CDE07G0154 Ceratophyllum demersum HOM05D006820 ORTHO05D008526 2.3e-56 222.6 171 64.9
Medtr5g099030 Medicago truncatula HOM05D006820 ORTHO05D008526 2.3e-56 222.6 172 64.5
Sc18g0005950 Simmondsia chinensis HOM05D006820 ORTHO05D008526 3.0e-56 222.2 173 61.3
AT4G38370 Arabidopsis thaliana HOM05D006820 ORTHO05D008526 5.1e-56 221.5 173 64.2
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 5.1e-56 221.5 170 62.9
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.1e-55 220.3 168 63.1
ATR0661G540 Amborella trichopoda HOM05D006820 ORTHO05D008526 1.5e-55 219.9 171 63.7
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.5e-55 219.9 170 62.4
PSO675G9330 Papaver somniferum HOM05D006820 ORTHO05D008526 1.5e-55 219.9 171 64.9
PSO541G0178 Papaver somniferum HOM05D006820 ORTHO05D008526 3.3e-55 218.8 171 64.9
AL7G10240 Arabidopsis lyrata HOM05D006820 ORTHO05D008526 5.7e-55 218.0 173 63.6
BcaC01g00229 Brassica carinata HOM05D006820 ORTHO05D008526 7.4e-55 217.6 173 62.4
SalBow1G3348 Salvia bowleyana HOM05D006820 ORTHO05D008526 7.4e-55 217.6 173 59.5
Aa31LG6G16790 Aethionema arabicum HOM05D006820 ORTHO05D008526 9.6e-55 217.2 173 61.3
Hund06169 Selenicereus undatus HOM05D006820 ORTHO05D008526 1.3e-54 216.9 170 62.4
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.6e-54 216.5 170 62.4
BraA08t34377Z Brassica rapa HOM05D000807 ORTHO05D000662 2.8e-54 215.7 173 60.7
BcaC01g00221 Brassica carinata HOM05D006820 ORTHO05D008526 3.7e-54 215.3 173 61.3
ECA233G1752 Erigeron canadensis HOM05D006820 ORTHO05D008526 4.8e-54 214.9 159 65.4
BraA08t34346Z Brassica rapa HOM05D006820 ORTHO05D008526 6.2e-54 214.5 173 61.3
CARHR294110 Cardamine hirsuta HOM05D006820 ORTHO05D008526 6.2e-54 214.5 173 60.1
BolC3t19961H Brassica oleracea HOM05D000807 ORTHO05D000662 8.2e-54 214.2 173 60.1
Sp7g37400 Schrenkiella parvula HOM05D006820 ORTHO05D008526 8.2e-54 214.2 173 60.7
unitig_0.g2740 Utricularia gibba HOM05D006820 ORTHO05D008526 1.1e-53 213.8 170 61.2
Thhalv10004876m.g Eutrema salsugineum HOM05D006820 ORTHO05D008526 1.8e-53 213.0 173 61.3
PSO170G2156 Papaver somniferum HOM05D006820 ORTHO05D008526 2.4e-53 212.6 170 62.4
VMungo0647G2489 Vigna mungo HOM05D006820 ORTHO05D008526 3.1e-53 212.2 171 62.0
HPP92_025502 Vanilla planifolia HOM05D006820 ORTHO05D008526 2.6e-52 209.1 171 59.1
RcHm_v2.0_Chr1g0329291 Rosa chinensis HOM05D006820 ORTHO05D008526 4.5e-52 208.4 171 64.3
PSO017G7138 Papaver somniferum HOM05D006820 ORTHO05D008526 2.2e-51 206.1 171 60.8
HPP92_025534 Vanilla planifolia HOM05D006820 ORTHO05D008526 8.4e-51 204.1 170 58.2
FvH4_7g04340 Fragaria vesca HOM05D006820 ORTHO05D008526 1.2e-49 200.3 171 61.4
MELO3C022591.2 Cucumis melo HOM05D006820 ORTHO05D008526 6.7e-48 194.5 108 86.1
FAN01G0447 Fragaria x ananassa HOM05D006820 ORTHO05D008526 7.4e-47 191.0 189 56.1
FAN03G3185 Fragaria x ananassa HOM05D006820 ORTHO05D008526 3.7e-46 188.7 189 55.6
FAN06G4449 Fragaria x ananassa HOM05D006820 ORTHO05D008526 8.2e-46 187.6 189 55.0
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 2.4e-45 186.0 184 53.3
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 9.0e-45 184.1 173 54.9
PSO675G0855 Papaver somniferum HOM05D006820 ORTHO05D008526 1.3e-43 180.3 173 56.1
Gohir.D12G038800 Gossypium hirsutum HOM05D006820 ORTHO05D008526 8.5e-43 177.6 108 75.0
COL.COLO4_17938 Corchorus olitorius HOM05D006820 ORTHO05D008526 1.4e-42 176.8 108 75.0
PSO541G2729 Papaver somniferum HOM05D006820 ORTHO05D008526 1.9e-42 176.4 173 55.5
Pp3c6_22700 Physcomitrium patens HOM05D006820 ORTHO05D008526 6.1e-41 171.4 170 51.8
Cc09_g10680 Coffea canephora HOM05D006820 ORTHO05D008526 1.3e-38 163.7 108 70.4
Psat2g001280 Pisum sativum HOM05D006820 ORTHO05D008526 1.4e-37 160.2 107 69.2
Dinv41882 Davidia involucrata HOM05D006820 ORTHO05D008526 6.9e-37 157.9 89 78.7
SMO347G0521 Selaginella moellendorffii HOM05D006820 ORTHO05D008526 3.4e-36 155.6 169 49.7
arahy.Tifrunner.gnm1.ann1.MXMJ8X Arachis hypogaea HOM05D006820 ORTHO05D008526 4.5e-36 155.2 117 64.1
Rhsim05G0047800 Rhododendron simsii HOM05D006820 ORTHO05D008526 7.7e-36 154.5 138 58.0
RhsimUnG0142100 Rhododendron simsii HOM05D006820 ORTHO05D008526 6.5e-35 151.4 138 57.2
AagrBONN_evm.TU.Sc2ySwM_344.5004 Anthoceros agrestis HOM05D006820 ORTHO05D008526 1.9e-34 149.8 175 45.7
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 5.5e-34 148.3 171 46.2
Mapoly0119s0027 Marchantia polymorpha HOM05D006820 ORTHO05D008526 1.2e-33 147.1 169 45.0
Cpa.g.sc20.200 Carica papaya HOM05D006820 ORTHO05D008526 4.7e-33 145.2 127 56.7
CSS0041656 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 1.3e-30 137.1 135 54.1
MD05G1133800 Malus domestica HOM05D006820 ORTHO05D008526 1.8e-29 133.3 147 53.7
arahy.Tifrunner.gnm1.ann1.JU0VI1 Arachis hypogaea HOM05D006820 ORTHO05D008526 3.8e-27 125.6 107 58.9
MD10G1042800 Malus domestica HOM05D006820 ORTHO05D008526 4.4e-23 112.1 105 60.0
CBR_g8644 Chara braunii HOM05D006820 ORTHO05D008526 1.3e-22 110.5 197 38.1
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 8.2e-22 107.8 66 71.2
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 1.1e-21 107.5 66 71.2
AUR62010100 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.0e-16 89.0 63 63.5
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 7.0e-13 78.2 157 35.7
arahy.Tifrunner.gnm1.ann1.E18LML Arachis hypogaea HOM05D006820 ORTHO05D008526 1.7e-11 73.6 47 72.3
A09p68760 Brassica napus HOM05D006820 ORTHO05D008526 2.9e-11 72.8 84 44.0
BraA09t42215Z Brassica rapa HOM05D006820 ORTHO05D008526 2.9e-11 72.8 84 44.0


User provided reference genes

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