Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 8.9e-63 243.4 122 100.0
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 4.3e-57 224.6 124 94.4
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 9.5e-49 196.8 122 82.8
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 2.6e-46 188.7 128 82.8
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 6.2e-40 167.5 122 72.1
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 8.1e-40 167.2 122 73.0
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 3.1e-39 165.2 122 71.3
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 2.0e-38 162.5 122 70.5
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 2.0e-38 162.5 122 69.7
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.4e-38 161.4 123 69.9
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.4e-38 161.4 122 70.5
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 4.4e-38 161.4 122 70.5
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 7.6e-38 160.6 123 69.9
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 7.6e-38 160.6 123 69.9
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 7.6e-38 160.6 123 69.9
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 1.3e-37 159.8 123 68.3
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.9e-37 158.7 122 68.9
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 3.7e-37 158.3 122 68.0
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 6.4e-37 157.5 122 68.9
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 8.3e-37 157.1 118 71.2
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 8.3e-37 157.1 122 70.5
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 8.3e-37 157.1 123 71.5
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.1e-36 156.8 124 70.2
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.4e-36 156.4 123 69.1
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 1.4e-36 156.4 123 67.5
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 1.9e-36 156.0 118 72.9
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 3.2e-36 155.2 123 68.3
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 4.1e-36 154.8 123 68.3
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 5.4e-36 154.5 122 68.0
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 1.2e-35 153.3 122 65.6
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.2e-35 153.3 123 67.5
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.6e-35 152.9 123 69.1
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 3.5e-35 151.8 118 72.0
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.0e-34 150.2 125 67.2
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.3e-34 149.8 122 67.2
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 1.7e-34 149.4 132 65.9
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 1.7e-34 149.4 132 62.9
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 2.3e-34 149.1 122 64.8
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 3.0e-34 148.7 122 70.5
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 3.9e-34 148.3 118 68.6
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 5.1e-34 147.9 126 68.3
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 5.1e-34 147.9 122 65.6
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 6.6e-34 147.5 122 65.6
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 8.6e-34 147.1 125 62.4
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 8.6e-34 147.1 129 63.6
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.1e-33 146.7 122 63.9
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 1.1e-33 146.7 125 65.6
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 1.1e-33 146.7 123 68.3
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.5e-33 146.4 124 64.5
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.5e-33 146.4 122 63.1
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.9e-33 146.0 122 63.1
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 2.5e-33 145.6 130 66.2
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 2.5e-33 145.6 130 66.2
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 3.3e-33 145.2 127 66.1
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 3.3e-33 145.2 123 65.0
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 3.3e-33 145.2 122 68.9
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 3.3e-33 145.2 130 63.1
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 7.3e-33 144.1 125 66.4
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 7.3e-33 144.1 81 85.2
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 7.3e-33 144.1 122 63.9
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.2e-32 143.3 130 64.6
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 3.6e-32 141.7 130 65.4
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 3.6e-32 141.7 126 65.1
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 3.6e-32 141.7 112 65.2
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 6.2e-32 141.0 122 59.8
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 6.2e-32 141.0 123 64.2
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 1.1e-31 140.2 123 61.0
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 1.1e-31 140.2 121 64.5
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.8e-31 139.4 79 83.5
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 2.4e-31 139.0 127 63.8
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 5.2e-31 137.9 116 60.3
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 6.8e-31 137.5 102 65.7
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 8.9e-31 137.1 102 65.7
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 7.6e-30 134.0 126 61.1
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 9.9e-30 133.7 83 78.3
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 9.9e-30 133.7 82 80.5
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 2.2e-29 132.5 122 59.0
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 2.9e-29 132.1 74 86.5
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 4.9e-29 131.3 67 89.6
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 6.4e-29 131.0 106 70.8
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 8.4e-29 130.6 124 60.5
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 1.1e-28 130.2 128 58.6
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 1.9e-28 129.4 131 58.8
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 2.4e-28 129.0 121 62.0
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 9.3e-28 127.1 69 84.1
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 2.7e-27 125.6 123 59.3
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 3.5e-27 125.2 76 89.5
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 6.0e-27 124.4 124 59.7
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 1.5e-25 119.8 76 75.0
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 2.8e-24 115.5 72 77.8
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 2.8e-24 115.5 165 43.6
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 2.0e-22 109.4 70 70.0
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 3.4e-22 108.6 101 55.4
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.4e-20 103.2 48 100.0
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 5.4e-20 101.3 49 91.8
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 1.3e-16 90.1 58 70.7
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 6.2e-16 87.8 70 57.1
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 8.4e-13 77.4 125 38.4
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.9e-09 66.2 85 44.7
CSS0040675 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 4.5e-06 55.1 74 47.3


User provided reference genes

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