Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 3.8e-54 214.5 104 100.0
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 7.8e-52 206.8 104 95.2
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.9e-50 202.2 104 93.3
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 6.4e-46 187.2 105 86.7
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 3.5e-44 181.4 104 81.7
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 2.3e-43 178.7 104 82.7
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 3.0e-43 178.3 104 79.8
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 6.6e-43 177.2 103 80.6
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.1e-42 176.4 104 81.7
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 1.9e-42 175.6 104 80.8
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 3.3e-42 174.9 105 81.0
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 4.3e-42 174.5 103 78.6
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 9.6e-42 173.3 107 79.4
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 1.3e-41 172.9 104 78.8
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.6e-41 172.6 104 77.9
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.6e-41 172.6 104 78.8
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 2.1e-41 172.2 104 78.8
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.8e-41 171.8 104 78.8
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 2.8e-41 171.8 105 78.1
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 4.8e-41 171.0 105 79.0
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 6.2e-41 170.6 105 78.1
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.1e-40 169.9 104 78.8
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 1.4e-40 169.5 106 79.2
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.8e-40 169.1 102 77.5
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.8e-40 169.1 104 78.8
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.8e-40 169.1 104 76.9
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 2.4e-40 168.7 102 77.5
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.4e-40 168.7 102 78.4
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 2.4e-40 168.7 102 78.4
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 2.4e-40 168.7 107 77.6
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 3.1e-40 168.3 102 77.5
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 3.1e-40 168.3 103 77.7
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 3.1e-40 168.3 110 75.5
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 3.1e-40 168.3 104 77.9
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 5.3e-40 167.5 104 76.9
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 6.9e-40 167.2 104 76.0
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 6.9e-40 167.2 112 75.9
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 9.0e-40 166.8 104 76.9
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 1.2e-39 166.4 112 72.3
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 1.2e-39 166.4 104 76.0
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 1.2e-39 166.4 106 75.5
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 1.5e-39 166.0 112 71.4
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 1.5e-39 166.0 112 70.5
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 1.5e-39 166.0 112 71.4
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 2.0e-39 165.6 106 76.4
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.0e-39 165.6 102 76.5
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 2.0e-39 165.6 112 73.2
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 2.6e-39 165.2 105 73.3
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 3.4e-39 164.9 112 71.4
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 3.4e-39 164.9 106 74.5
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 5.8e-39 164.1 112 70.5
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 5.8e-39 164.1 105 72.4
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 5.8e-39 164.1 106 74.5
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 9.9e-39 163.3 113 69.9
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 1.7e-38 162.5 106 77.4
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 6.4e-38 160.6 105 76.2
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 8.4e-38 160.2 107 73.8
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 1.4e-37 159.5 113 70.8
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 1.9e-37 159.1 114 69.3
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 2.4e-37 158.7 106 76.4
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 3.2e-37 158.3 113 68.1
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 5.4e-37 157.5 106 70.8
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 7.1e-37 157.1 77 89.6
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 7.1e-37 157.1 114 68.4
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 7.1e-37 157.1 114 68.4
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 7.1e-37 157.1 114 68.4
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 1.2e-36 156.4 106 74.5
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 2.7e-36 155.2 113 68.1
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 3.5e-36 154.8 113 69.0
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 3.5e-36 154.8 107 74.8
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 3.5e-36 154.8 106 70.8
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 6.0e-36 154.1 113 69.0
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 6.0e-36 154.1 115 68.7
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 6.0e-36 154.1 107 73.8
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 7.9e-36 153.7 113 67.3
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 1.3e-35 152.9 107 70.1
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 2.3e-35 152.1 121 65.3
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 2.3e-35 152.1 104 72.1
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 3.9e-35 151.4 107 71.0
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 5.1e-35 151.0 106 69.8
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 6.7e-35 150.6 106 71.7
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 6.7e-35 150.6 106 71.7
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 8.7e-35 150.2 114 66.7
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 1.1e-34 149.8 107 72.9
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 1.1e-34 149.8 106 70.8
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 1.5e-34 149.4 105 69.5
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 1.9e-34 149.1 105 70.5
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 2.5e-34 148.7 101 73.3
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.3e-33 146.4 95 74.7
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.6e-33 146.0 101 72.3
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 2.8e-33 145.2 104 69.2
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 4.8e-33 144.4 115 67.0
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 8.1e-33 143.7 105 65.7
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 1.2e-31 139.8 104 66.3
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.5e-31 139.4 66 93.9
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 2.6e-31 138.7 104 67.3
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 7.6e-31 137.1 104 66.3
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.9e-29 132.5 94 69.1
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 2.5e-29 132.1 86 72.1
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 3.2e-29 131.7 64 90.6
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 4.2e-29 131.3 93 67.7
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 4.2e-29 131.3 160 48.8
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 5.5e-29 131.0 110 60.0
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.0e-27 126.7 65 89.2
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 3.0e-27 125.2 104 55.8
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 8.7e-27 123.6 77 74.0
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 4.3e-26 121.3 98 62.2
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 1.6e-25 119.4 71 71.8
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 2.1e-25 119.0 62 87.1
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 8.2e-25 117.1 72 68.1
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 1.2e-23 113.2 88 67.0
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.5e-23 112.8 103 59.2
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.1e-18 96.7 70 77.1
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 5.7e-18 94.4 67 73.1
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 9.7e-18 93.6 77 59.7
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 1.3e-14 83.2 74 58.1
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 2.2e-14 82.4 69 65.2
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 3.6e-12 75.1 65 58.5
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 8.2e-09 63.9 35 74.3


User provided reference genes

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