Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G006470 Citrullus lanatus HOM05D000539 ORTHO05D000233 2.4e-150 535.4 265 100.0
ClCG09G008820 Citrullus lanatus HOM05D000539 ORTHO05D000233 1.2e-19 101.3 79 58.2
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 2.0e-19 100.5 77 57.1
Sed0019136 Sechium edule HOM05D000539 ORTHO05D000233 2.2e-18 97.1 91 51.6
MELO3C033845.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.9e-17 94.0 75 54.7
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.2e-17 93.2 105 40.0
CsaV3_6G018640 Cucumis sativus L. HOM05D000539 ORTHO05D000233 4.2e-17 92.8 74 54.1
Sed0009359 Sechium edule HOM05D000107 ORTHO05D000062 4.2e-17 92.8 74 58.1
ClCG02G009460 Citrullus lanatus HOM05D000616 ORTHO05D000233 9.4e-17 91.7 143 39.9
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.2e-16 91.3 76 53.9
MELO3C032241.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.2e-16 91.3 76 51.3
Sed0019036 Sechium edule HOM05D000539 ORTHO05D000592 1.2e-16 91.3 237 29.1
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 1.6e-16 90.9 131 35.9
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 2.1e-16 90.5 105 39.0
Sed0022033 Sechium edule HOM05D000539 ORTHO05D000233 2.1e-16 90.5 131 40.5
MELO3C027188.2 Cucumis melo HOM05D000583 ORTHO05D000233 3.6e-16 89.7 75 50.7
MELO3C028618.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.6e-16 89.4 207 28.5
MELO3C027955.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.4e-15 87.8 75 52.0
MELO3C033323.2 Cucumis melo HOM05D000616 ORTHO05D000233 1.4e-15 87.8 77 51.9
MELO3C029587.2 Cucumis melo HOM05D000616 ORTHO05D000233 5.1e-15 85.9 67 56.7
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.5e-14 84.3 76 50.0
Sed0016258 Sechium edule HOM05D000539 ORTHO05D000233 1.5e-14 84.3 142 38.7
CsaV3_4G008540 Cucumis sativus L. HOM05D000539 ORTHO05D000233 2.5e-14 83.6 67 55.2
Sed0022893 Sechium edule HOM05D000539 ORTHO05D000233 4.3e-14 82.8 61 60.7
MELO3C030669.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.7e-14 82.4 116 40.5
MELO3C034551.2 Cucumis melo HOM05D007110 ORTHO05D000233 9.7e-14 81.6 98 40.8
Sed0010052 Sechium edule HOM05D000539 ORTHO05D000233 9.7e-14 81.6 74 52.7
MELO3C033637.2 Cucumis melo HOM05D007110 ORTHO05D000233 2.4e-12 77.0 225 27.6
MELO3C034178.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.1e-12 76.6 67 49.3
ClCG01G011790 Citrullus lanatus HOM05D000539 ORTHO05D000233 5.3e-12 75.9 95 38.9
MELO3C034336.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.3e-12 75.9 211 28.9
MELO3C035597.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.0e-11 73.9 178 29.8
MELO3C027932.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.6e-11 73.6 90 40.0
MELO3C030505.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.6e-11 73.6 57 52.6
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-11 73.6 76 44.7
Rhsim05G0145200 Rhododendron simsii HOM05D000616 ORTHO05D000233 1.0e-10 71.6 87 39.1
MELO3C027432.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.3e-10 71.2 115 36.5
MELO3C030421.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.3e-10 71.2 95 36.8
PSO724G0149 Papaver somniferum HOM05D000616 ORTHO05D000233 2.2e-10 70.5 69 47.8
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.2e-10 70.5 142 35.2
MELO3C034611.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.9e-10 70.1 51 58.8
RcHm_v2.0_Chr3g0482281 Rosa chinensis HOM05D002644 ORTHO05D000233 2.9e-10 70.1 77 44.2
CsaV3_3G020500 Cucumis sativus L. HOM05D007110 ORTHO05D000233 3.8e-10 69.7 71 40.8
Sed0004787 Sechium edule HOM05D000539 ORTHO05D000233 3.8e-10 69.7 133 35.3
ClCG03G012240 Citrullus lanatus HOM05D016206 ORTHO05D000233 1.1e-09 68.2 72 44.4
Ciclev10007052m.g Citrus clementina HOM05D000616 ORTHO05D000233 1.4e-09 67.8 72 47.2
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 1.4e-09 67.8 90 37.8
Ciclev10033599m.g Citrus clementina HOM05D000616 ORTHO05D000233 1.9e-09 67.4 72 47.2
Ciclev10024574m.g Citrus clementina HOM05D000616 ORTHO05D000233 2.5e-09 67.0 72 45.8
RcHm_v2.0_Chr1g0325021 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-09 67.0 141 32.6
MELO3C029326.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.5e-09 65.9 229 28.4
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 7.2e-09 65.5 92 37.0
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 7.2e-09 65.5 76 38.2
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 7.2e-09 65.5 76 38.2
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 7.2e-09 65.5 138 34.1
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-08 64.3 75 34.7
RcHm_v2.0_Chr1g0318231 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-08 64.3 141 31.9
ClCG02G012710 Citrullus lanatus HOM05D000539 ORTHO05D000233 2.1e-08 63.9 67 44.8
Ciclev10033571m.g Citrus clementina HOM05D000616 ORTHO05D000233 2.1e-08 63.9 76 39.5
Ciclev10013461m.g Citrus clementina HOM05D000616 ORTHO05D000233 2.7e-08 63.5 69 46.4
SHI40406 Sapria himalayana HOM05D000616 ORTHO05D000062 3.6e-08 63.2 101 36.6
Ciclev10023988m.g Citrus clementina HOM05D000616 ORTHO05D000233 7.9e-08 62.0 72 44.4
MELO3C032426.2 Cucumis melo HOM05D000616 ORTHO05D000233 7.9e-08 62.0 105 34.3
SHI01074 Sapria himalayana HOM05D000616 ORTHO05D000233 7.9e-08 62.0 78 41.0
MELO3C031353.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.0e-07 61.6 75 40.0
Ciclev10003585m.g Citrus clementina HOM05D000616 ORTHO05D000233 1.4e-07 61.2 73 39.7
Ciclev10017763m.g Citrus clementina HOM05D000616 ORTHO05D000233 1.4e-07 61.2 74 39.2
SHI46711 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-07 61.2 71 45.1
SHI22835 Sapria himalayana HOM05D000616 ORTHO05D000233 1.8e-07 60.8 100 38.0
Hma1.2p1_0473F.1_g160240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 2.3e-07 60.5 74 37.8
SHI23159 Sapria himalayana HOM05D000616 ORTHO05D000233 3.0e-07 60.1 78 41.0
GSVIVG01008009001 Vitis vinifera HOM05D000616 ORTHO05D000233 3.0e-07 60.1 82 34.1
GSVIVG01027893001 Vitis vinifera HOM05D000616 ORTHO05D000233 3.0e-07 60.1 82 34.1
PSO455G0142 Papaver somniferum HOM05D000539 ORTHO05D000233 3.9e-07 59.7 76 34.2
SHI36208 Sapria himalayana HOM05D000616 ORTHO05D000233 3.9e-07 59.7 78 41.0
GSVIVG01006109001 Vitis vinifera HOM05D000616 ORTHO05D000233 3.9e-07 59.7 82 34.1
GSVIVG01007627001 Vitis vinifera HOM05D000616 ORTHO05D000233 3.9e-07 59.7 82 34.1
GSVIVG01026840001 Vitis vinifera HOM05D000616 ORTHO05D000233 3.9e-07 59.7 82 34.1
SHI12294 Sapria himalayana HOM05D000616 ORTHO05D000233 5.1e-07 59.3 71 42.3
SHI36983 Sapria himalayana HOM05D000616 ORTHO05D000233 5.1e-07 59.3 78 41.0
GSVIVG01005143001 Vitis vinifera HOM05D000616 ORTHO05D000233 5.1e-07 59.3 82 34.1
GSVIVG01014009001 Vitis vinifera HOM05D000616 ORTHO05D000233 5.1e-07 59.3 82 34.1
CSS0023486 Camellia sinensis var. sinensis HOM05D000616 ORTHO05D000233 6.7e-07 58.9 71 40.8
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 6.7e-07 58.9 79 40.5
SHI32563 Sapria himalayana HOM05D000616 ORTHO05D000233 6.7e-07 58.9 78 39.7
SHI34319 Sapria himalayana HOM05D000616 ORTHO05D000233 6.7e-07 58.9 79 38.0
DCAR_031676 Daucus carota HOM05D000539 ORTHO05D000233 1.1e-06 58.2 88 37.5
Hma1.2p1_0096F.1_g047665 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.1e-06 58.2 123 30.1
Hma1.2p1_0409F.1_g146975 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.1e-06 58.2 123 30.1
PSO170G4584 Papaver somniferum HOM05D000539 ORTHO05D000233 1.5e-06 57.8 76 32.9
CSS0029876 Camellia sinensis var. sinensis HOM05D012584 ORTHO05D000233 2.0e-06 57.4 96 32.3
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 2.0e-06 57.4 121 29.8
SHI07854 Sapria himalayana HOM05D000616 ORTHO05D000233 2.0e-06 57.4 95 35.8
SHI22553 Sapria himalayana HOM05D000616 ORTHO05D000233 2.0e-06 57.4 110 32.7
SHI03166 Sapria himalayana HOM05D000616 ORTHO05D000233 2.6e-06 57.0 107 33.6
SHI14215 Sapria himalayana HOM05D000616 ORTHO05D000233 2.6e-06 57.0 77 39.0
SHI15157 Sapria himalayana HOM05D000616 ORTHO05D000233 2.6e-06 57.0 89 36.0
SHI38964 Sapria himalayana HOM05D000616 ORTHO05D000233 2.6e-06 57.0 77 37.7
CANSAT01G0116 Cannabis sativa HOM05D000539 ORTHO05D000233 3.3e-06 56.6 74 39.2
SHI01566 Sapria himalayana HOM05D000616 ORTHO05D000233 3.3e-06 56.6 89 38.2
SHI24625 Sapria himalayana HOM05D000616 ORTHO05D000233 3.3e-06 56.6 85 38.8
CANSAT54G0141 Cannabis sativa HOM05D009806 ORTHO05D000233 4.4e-06 56.2 76 36.8
SHI03580 Sapria himalayana HOM05D000616 ORTHO05D000233 4.4e-06 56.2 89 36.0
SHI16613 Sapria himalayana HOM05D000616 ORTHO05D000233 4.4e-06 56.2 117 32.5
SHI36850 Sapria himalayana HOM05D000616 ORTHO05D000233 4.4e-06 56.2 78 38.5
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 5.7e-06 55.8 183 31.7
Ca_04520_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 5.7e-06 55.8 122 32.8
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 5.7e-06 55.8 196 25.0
SHI17407 Sapria himalayana HOM05D000616 ORTHO05D000233 5.7e-06 55.8 78 39.7
SHI21570 Sapria himalayana HOM05D000616 ORTHO05D000233 5.7e-06 55.8 87 36.8
SHI37543 Sapria himalayana HOM05D000616 ORTHO05D000233 5.7e-06 55.8 78 38.5
FAN26G3042 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.4e-06 55.5 83 34.9
SHI08770 Sapria himalayana HOM05D000616 ORTHO05D000233 7.4e-06 55.5 100 33.0
SHI23185 Sapria himalayana HOM05D000616 ORTHO05D000233 7.4e-06 55.5 72 40.3
SHI23934 Sapria himalayana HOM05D000616 ORTHO05D000233 7.4e-06 55.5 76 36.8
SHI32821 Sapria himalayana HOM05D000616 ORTHO05D000233 7.4e-06 55.5 238 25.2
SHI34539 Sapria himalayana HOM05D000616 ORTHO05D000233 9.7e-06 55.1 78 39.7
SHI36826 Sapria himalayana HOM05D000616 ORTHO05D000233 9.7e-06 55.1 94 33.0
SHI41978 Sapria himalayana HOM05D000616 ORTHO05D000233 9.7e-06 55.1 79 39.2


User provided reference genes

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