Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 8.2e-106 387.1 201 100.0
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 1.4e-65 253.4 145 93.1
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.9e-49 199.9 146 78.8
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 4.7e-45 185.3 204 58.8
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 1.7e-42 176.8 146 68.5
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 2.7e-40 169.5 145 66.9
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 4.3e-38 162.2 146 65.1
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 5.6e-38 161.8 144 63.9
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 5.6e-38 161.8 145 65.5
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 9.5e-38 161.0 154 63.6
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 1.6e-37 160.2 144 66.7
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.1e-37 159.8 145 64.1
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 2.8e-37 159.5 141 65.2
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 4.7e-37 158.7 145 64.8
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 4.7e-37 158.7 145 62.8
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 1.1e-36 157.5 146 63.0
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 1.1e-36 157.5 146 65.8
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 1.8e-36 156.8 154 59.1
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 3.1e-36 156.0 143 67.1
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 3.1e-36 156.0 145 62.8
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 5.2e-36 155.2 145 59.3
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 5.2e-36 155.2 145 60.7
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 8.9e-36 154.5 146 65.1
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.2e-35 154.1 146 65.8
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.2e-35 154.1 146 63.0
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 1.5e-35 153.7 149 63.8
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 1.5e-35 153.7 146 61.0
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 3.4e-35 152.5 145 60.7
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 3.4e-35 152.5 145 61.4
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 4.4e-35 152.1 149 61.1
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 7.5e-35 151.4 146 64.4
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 9.9e-35 151.0 149 61.1
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 2.9e-34 149.4 138 64.5
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 4.9e-34 148.7 148 61.5
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 6.4e-34 148.3 162 55.6
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 6.4e-34 148.3 148 61.5
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 8.3e-34 147.9 146 60.3
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 1.1e-33 147.5 146 59.6
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.4e-33 146.4 147 57.1
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 4.1e-33 145.6 146 59.6
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 5.4e-33 145.2 147 57.1
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 5.4e-33 145.2 152 59.2
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 5.4e-33 145.2 148 60.8
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 5.4e-33 145.2 147 63.9
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 7.1e-33 144.8 116 67.2
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 7.1e-33 144.8 146 60.3
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 7.1e-33 144.8 142 62.7
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.2e-32 144.1 146 58.9
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.2e-32 144.1 146 62.3
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.2e-32 144.1 147 56.5
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.2e-32 144.1 111 73.9
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.6e-32 143.7 149 59.1
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.1e-32 143.3 105 75.2
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 2.7e-32 142.9 146 58.2
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.5e-32 142.5 107 71.0
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 3.5e-32 142.5 138 63.0
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.6e-32 142.1 146 59.6
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 7.8e-32 141.4 146 62.3
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 1.7e-31 140.2 110 73.6
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.7e-31 140.2 147 58.5
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 3.0e-31 139.4 147 57.8
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 3.0e-31 139.4 146 59.6
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.9e-31 139.0 146 61.0
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 5.1e-31 138.7 151 57.0
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 8.6e-31 137.9 148 56.8
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 8.6e-31 137.9 150 57.3
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 1.1e-30 137.5 108 68.5
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.9e-30 136.7 111 68.5
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 7.3e-30 134.8 145 57.9
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 9.5e-30 134.4 149 55.0
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 1.2e-29 134.0 148 56.8
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 1.2e-29 134.0 153 55.6
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 1.6e-29 133.7 149 58.4
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.6e-29 133.7 145 56.6
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 3.6e-29 132.5 146 54.8
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 3.6e-29 132.5 108 69.4
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 4.7e-29 132.1 153 56.2
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 4.7e-29 132.1 153 56.2
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 1.1e-28 131.0 149 56.4
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 1.1e-28 131.0 149 56.4
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.8e-28 130.2 109 65.1
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.8e-28 130.2 88 79.5
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.4e-28 129.8 152 53.9
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 4.0e-28 129.0 161 53.4
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 5.2e-28 128.6 87 78.2
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 6.8e-28 128.3 133 60.2
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 8.9e-28 127.9 150 54.7
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.5e-27 127.1 133 60.9
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.7e-26 123.6 133 57.1
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 3.8e-26 122.5 96 69.8
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 4.9e-26 122.1 146 53.4
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 4.9e-26 122.1 104 62.5
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 8.4e-26 121.3 147 53.1
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.9e-25 120.2 86 69.8
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.2e-25 119.0 133 54.9
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.2e-24 117.5 132 53.0
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.6e-24 117.1 121 57.0
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 2.7e-24 116.3 118 55.9
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 2.3e-23 113.2 107 57.0
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.5e-22 110.5 132 51.5
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 3.3e-22 109.4 118 56.8
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 2.6e-19 99.8 82 63.4
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 2.6e-19 99.8 80 61.2
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 2.2e-18 96.7 114 51.8
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 6.4e-18 95.1 117 52.1
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 3.5e-16 89.4 96 50.0
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 2.3e-15 86.7 89 47.2
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 5.6e-14 82.0 112 50.0
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 1.6e-13 80.5 102 52.9
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 2.1e-13 80.1 97 48.5
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 1.8e-12 77.0 78 50.0
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 4.0e-12 75.9 55 70.9
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 4.0e-12 75.9 84 46.4
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 4.5e-11 72.4 82 47.6
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 6.4e-10 68.6 102 46.1


User provided reference genes

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