Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 9.1e-149 530.4 305 100.0
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 3.1e-125 452.2 306 85.0
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 4.7e-121 438.3 307 81.1
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 1.4e-101 373.6 305 66.6
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 7.4e-66 255.0 312 52.2
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 1.3e-65 254.2 315 49.2
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 4.8e-65 252.3 310 48.1
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 1.2e-63 247.7 313 47.0
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 3.4e-63 246.1 322 46.6
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 4.5e-63 245.7 311 50.5
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 1.7e-62 243.8 312 51.6
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 2.9e-62 243.0 313 46.3
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 3.8e-62 242.7 313 51.1
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 3.8e-62 242.7 308 45.8
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 1.9e-61 240.4 323 45.8
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 5.5e-61 238.8 314 46.8
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 9.3e-61 238.0 322 46.3
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 9.3e-61 238.0 313 47.0
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 1.6e-60 237.3 324 44.8
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 3.0e-59 233.0 312 45.2
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 6.7e-59 231.9 320 44.4
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 1.1e-58 231.1 329 44.7
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 2.5e-58 229.9 339 41.9
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 7.4e-58 228.4 317 43.5
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 1.3e-57 227.6 318 44.0
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 2.1e-57 226.9 312 44.6
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 2.1e-57 226.9 214 55.6
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 2.1e-57 226.9 320 45.6
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 3.7e-57 226.1 216 55.6
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 3.7e-57 226.1 311 46.0
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 8.2e-57 224.9 319 47.6
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 4.0e-56 222.6 316 42.1
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 5.3e-56 222.2 321 43.6
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 6.9e-56 221.9 316 47.8
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 2.0e-55 220.3 314 43.0
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.0e-55 220.3 308 47.4
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 4.5e-55 219.2 325 43.1
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 1.0e-54 218.0 312 41.3
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 2.9e-54 216.5 317 44.2
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 4.9e-54 215.7 308 46.8
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 4.9e-54 215.7 311 42.1
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 8.4e-54 214.9 313 42.8
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 1.1e-53 214.5 313 42.8
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.1e-53 214.5 312 42.0
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 1.4e-53 214.2 209 54.5
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 3.2e-53 213.0 313 42.2
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 5.5e-53 212.2 313 40.9
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 7.1e-53 211.8 312 43.6
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 7.1e-53 211.8 313 42.8
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 7.1e-53 211.8 362 40.1
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 9.3e-53 211.5 311 46.9
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 1.6e-52 210.7 312 40.7
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 3.5e-52 209.5 340 41.2
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 6.0e-52 208.8 318 40.9
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 7.9e-52 208.4 211 51.7
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 1.0e-51 208.0 316 41.5
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 2.3e-51 206.8 312 42.9
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 2.3e-51 206.8 326 40.5
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 3.0e-51 206.5 284 44.4
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 2.5e-50 203.4 318 40.3
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 3.3e-50 203.0 313 40.9
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 5.7e-50 202.2 307 43.0
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 7.4e-50 201.8 219 51.6
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 9.7e-50 201.4 311 40.8
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 1.3e-49 201.1 215 48.8
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 2.1e-49 200.3 319 40.8
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 8.2e-49 198.4 350 38.6
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 5.3e-48 195.7 323 41.5
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 6.9e-48 195.3 312 40.4
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 9.0e-48 194.9 308 44.5
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 1.2e-47 194.5 320 40.0
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 1.2e-47 194.5 320 40.0
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 1.2e-47 194.5 320 40.0
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 1.2e-47 194.5 312 43.3
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 2.0e-47 193.7 314 40.4
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 2.0e-47 193.7 314 40.4
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 2.6e-47 193.4 313 38.7
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 3.4e-47 193.0 313 38.7
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 4.5e-47 192.6 311 39.9
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 4.5e-47 192.6 315 43.2
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 7.6e-47 191.8 225 47.6
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 1.3e-46 191.0 310 39.4
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 2.9e-46 189.9 314 38.2
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 3.8e-46 189.5 315 39.0
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 5.0e-46 189.1 327 38.2
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 1.1e-45 188.0 317 39.1
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 1.1e-45 188.0 317 39.1
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 2.5e-45 186.8 311 38.9
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 3.2e-45 186.4 307 37.5
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 9.3e-45 184.9 307 44.6
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 1.6e-44 184.1 322 40.1
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 2.7e-44 183.3 325 38.8
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 4.6e-44 182.6 316 38.9
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 4.6e-44 182.6 318 39.0
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 6.1e-44 182.2 315 36.5
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 7.9e-44 181.8 311 36.3
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 1.3e-43 181.0 313 39.0
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 1.3e-43 181.0 312 38.8
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 2.3e-43 180.3 314 40.1
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 8.7e-43 178.3 317 38.5
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 8.7e-43 178.3 313 38.3
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 4.3e-42 176.0 218 47.2
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 4.3e-42 176.0 299 36.8
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 7.4e-42 175.3 310 36.5
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 1.7e-41 174.1 314 37.3
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 2.8e-41 173.3 237 43.9
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 1.4e-40 171.0 315 38.1
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 2.4e-40 170.2 329 35.0
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 2.4e-40 170.2 312 36.5
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 5.3e-40 169.1 309 35.0
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 5.3e-40 169.1 312 36.9
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 6.9e-40 168.7 245 38.0
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 2.6e-39 166.8 317 37.2
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 3.4e-39 166.4 313 36.4
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 3.4e-39 166.4 312 36.5
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 5.9e-39 165.6 318 36.8
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 1.0e-38 164.9 312 35.6
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 1.0e-38 164.9 322 38.2
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 1.4e-37 161.0 312 35.9
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 1.4e-37 161.0 308 41.6
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 1.9e-37 160.6 315 36.5
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 5.5e-37 159.1 317 35.3
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 9.4e-37 158.3 309 35.0
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 2.1e-36 157.1 321 37.1
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 2.2e-30 137.1 205 38.5
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 4.2e-29 132.9 285 33.7
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 6.1e-28 129.0 318 33.0
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 1.8e-27 127.5 274 33.9
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 3.0e-27 126.7 257 38.1
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 2.6e-26 123.6 288 36.1
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 2.8e-25 120.2 309 32.4
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 2.8e-25 120.2 309 32.4
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 1.7e-22 110.9 156 46.2
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 8.5e-22 108.6 164 41.5
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.9e-21 107.5 351 28.2
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 7.2e-21 105.5 355 29.3
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 1.0e-19 101.7 377 28.1
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 1.0e-19 101.7 173 39.3
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 4.0e-19 99.8 196 37.2
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 2.2e-17 94.0 88 55.7
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 6.3e-17 92.4 151 39.7
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.1e-16 91.7 356 27.0
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 2.2e-14 84.0 127 41.7
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 9.4e-13 78.6 385 23.6
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 9.4e-13 78.6 350 25.4
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 1.2e-12 78.2 318 28.3
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 4.7e-12 76.3 100 43.0
FAN15G1877 Fragaria x ananassa HOM05D001401 ORTHO05D006368 8.3e-09 65.5 43 69.8
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 8.3e-09 65.5 55 63.6
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 1.1e-08 65.1 43 67.4
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 4.1e-08 63.2 154 27.9
SEGI_34742 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 5.0e-06 56.2 137 32.8


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