Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G003760 Citrullus lanatus HOM05D000365 ORTHO05D149646 3.0e-48 194.9 101 100.0
CsaV3_7G001390 Cucumis sativus L. HOM05D000365 ORTHO05D000154 2.2e-22 109.0 119 57.1
MELO3C013311.2 Cucumis melo HOM05D000365 ORTHO05D000154 1.8e-21 105.9 119 54.6
ClCG02G003740 Citrullus lanatus HOM05D000365 ORTHO05D000154 1.3e-19 99.8 107 56.1
Sed0014909 Sechium edule HOM05D000365 ORTHO05D000154 5.9e-12 74.3 122 45.9
MELO3C013313.2 Cucumis melo HOM05D000365 ORTHO05D000154 2.2e-11 72.4 81 51.9
ClCG02G003750 Citrullus lanatus HOM05D000365 ORTHO05D000154 3.8e-11 71.6 81 53.1
CsaV3_7G001380 Cucumis sativus L. HOM05D000365 ORTHO05D000154 4.7e-09 64.7 81 48.1
CsaV3_7G001400 Cucumis sativus L. HOM05D000365 ORTHO05D000154 1.0e-08 63.5 81 45.7
MELO3C013310.2 Cucumis melo HOM05D000365 ORTHO05D000154 1.4e-08 63.2 81 48.1
ClCG02G003780 Citrullus lanatus HOM05D000365 ORTHO05D000154 2.3e-08 62.4 56 57.1
Cfa005314 Carpinus fangiana HOM05D000365 ORTHO05D000154 1.1e-07 60.1 61 55.7
CsaV3_7G001370 Cucumis sativus L. HOM05D000365 ORTHO05D000154 1.1e-07 60.1 79 53.2
MELO3C013315.2 Cucumis melo HOM05D000365 ORTHO05D000154 2.0e-07 59.3 118 42.4
DCAR_022415 Daucus carota HOM05D000365 ORTHO05D000154 2.6e-07 58.9 84 46.4
CSS0000080 Camellia sinensis var. sinensis HOM05D000365 ORTHO05D000154 7.5e-07 57.4 81 44.4
CSS0015347 Camellia sinensis var. sinensis HOM05D000365 ORTHO05D000154 7.5e-07 57.4 81 44.4
CSS0033599 Camellia sinensis var. sinensis HOM05D000365 ORTHO05D000154 7.5e-07 57.4 81 44.4
DCAR_003196 Daucus carota HOM05D000365 ORTHO05D000154 7.5e-07 57.4 84 42.9
Haze_02081 Corylus avellana HOM05D000365 ORTHO05D000154 9.7e-07 57.0 86 47.7
Haze_02072 Corylus avellana HOM05D000365 ORTHO05D000154 1.7e-06 56.2 50 62.0
Dinv41904 Davidia involucrata HOM05D000365 ORTHO05D000154 1.7e-06 56.2 82 50.0
Sed0018554 Sechium edule HOM05D000365 ORTHO05D000154 1.7e-06 56.2 120 35.8
QL11p052670 Quercus lobata HOM05D000365 ORTHO05D000154 2.2e-06 55.8 83 48.2
QL11p052746 Quercus lobata HOM05D000365 ORTHO05D000154 2.2e-06 55.8 83 48.2
Hma1.2p1_0315F.1_g122710 Hydrangea macrophylla HOM05D000365 ORTHO05D000154 2.8e-06 55.5 82 45.1
Oeu045085.1 Olea europaea HOM05D000170 ORTHO05D000154 2.8e-06 55.5 84 47.6
Cfa005311 Carpinus fangiana HOM05D000365 ORTHO05D000154 3.7e-06 55.1 50 62.0
Haze_02077 Corylus avellana HOM05D000365 ORTHO05D000154 3.7e-06 55.1 51 60.8
FvH4_2g15840 Fragaria vesca HOM05D000365 ORTHO05D000154 3.7e-06 55.1 83 44.6
QL11p052706 Quercus lobata HOM05D000365 ORTHO05D000154 3.7e-06 55.1 83 47.0
SalBow3G1338 Salvia bowleyana HOM05D000365 ORTHO05D000154 3.7e-06 55.1 78 43.6
Haze_02080 Corylus avellana HOM05D000365 ORTHO05D000154 4.8e-06 54.7 48 62.5
FvH4_2g15880 Fragaria vesca HOM05D000365 ORTHO05D000154 4.8e-06 54.7 83 43.4
FAN24G2335 Fragaria x ananassa HOM05D000365 ORTHO05D000154 4.8e-06 54.7 83 43.4
Sed0021674 Sechium edule HOM05D000365 ORTHO05D000154 4.8e-06 54.7 119 42.0
Thecc.02G052900 Theobroma cacao HOM05D000365 ORTHO05D000154 4.8e-06 54.7 81 43.2
SGA_v2.0_scaffold207G41939 Striga asiatica HOM05D000170 ORTHO05D000154 6.3e-06 54.3 83 42.2
Cfa005313 Carpinus fangiana HOM05D000365 ORTHO05D000154 8.2e-06 53.9 50 60.0


User provided reference genes

Program Settings