Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G002030 Citrullus lanatus HOM05D000304 ORTHO05D000185 6.6e-55 217.6 136 100.0
CsaV3_7G003470 Cucumis sativus L. HOM05D000304 ORTHO05D000185 4.0e-36 155.2 109 89.0
Sed0013409 Sechium edule HOM05D000304 ORTHO05D000185 2.4e-20 102.8 129 67.4
QL08p032171 Quercus lobata HOM05D000304 ORTHO05D000185 1.7e-15 86.7 115 48.7
CSS0030511 Camellia sinensis var. sinensis HOM05D000304 ORTHO05D000185 3.3e-14 82.4 112 56.2
Nitab4.5_0000130g0320 Nicotiana tabacum HOM05D000304 ORTHO05D000185 1.4e-12 77.0 123 40.7
Peaxi162Scf00007g00315 Petunia axillaris HOM05D000304 ORTHO05D000185 4.0e-12 75.5 79 53.2
Cfa014359 Carpinus fangiana HOM05D000304 ORTHO05D000185 5.3e-12 75.1 112 44.6
Manes.13G068100 Manihot esculenta HOM05D000304 ORTHO05D000185 5.3e-12 75.1 114 43.0
Eucgr.K00786 Eucalyptus grandis HOM05D000304 ORTHO05D000185 6.9e-12 74.7 43 81.4
CiPaw.04G114200 Carya illinoinensis HOM05D000304 ORTHO05D000185 2.6e-11 72.8 112 42.0
Manes.12G072800 Manihot esculenta HOM05D000304 ORTHO05D000185 3.4e-11 72.4 77 54.5
Cpa.g.sc87.103 Carica papaya HOM05D000304 ORTHO05D000185 5.8e-11 71.6 128 43.8
CiPaw.03G158300 Carya illinoinensis HOM05D000304 ORTHO05D000185 7.6e-11 71.2 110 40.9
DCAR_019267 Daucus carota HOM05D000304 ORTHO05D000185 9.9e-11 70.9 114 49.1
Actinidia10816 Actinidia chinensis HOM05D000304 ORTHO05D000185 1.3e-10 70.5 111 43.2
DCAR_021163 Daucus carota HOM05D000304 ORTHO05D000185 1.3e-10 70.5 78 51.3
Lalb_Chr01g0005761 Lupinus albus HOM05D000304 ORTHO05D000185 1.3e-10 70.5 47 70.2
MD17G1099000 Malus domestica HOM05D000304 ORTHO05D000185 1.7e-10 70.1 118 42.4
Sabra14G0117400 Salix brachista HOM05D000304 ORTHO05D000185 1.7e-10 70.1 80 50.0
Haze_12811 Corylus avellana HOM05D000304 ORTHO05D000185 2.9e-10 69.3 43 76.7
HanXRQChr16g0506841 Helianthus annuus HOM05D000304 ORTHO05D000185 2.9e-10 69.3 109 39.4
Oeu007116.1 Olea europaea HOM05D000304 ORTHO05D000185 3.8e-10 68.9 77 48.1
CSS0016019 Camellia sinensis var. sinensis HOM05D000304 ORTHO05D000185 4.9e-10 68.6 114 41.2
Solyc07g051840.4 Solanum lycopersicum HOM05D000304 ORTHO05D000185 4.9e-10 68.6 84 45.2
Rhsim06G0164400 Rhododendron simsii HOM05D000304 ORTHO05D000185 6.4e-10 68.2 117 35.9
Lsat_1_v5_gn_7_92541 Lactuca sativa HOM05D000304 ORTHO05D000185 8.4e-10 67.8 76 50.0
Oeu019890.1 Olea europaea HOM05D000304 ORTHO05D000185 8.4e-10 67.8 80 48.8
Prupe.3G214800 Prunus persica HOM05D000304 ORTHO05D000185 8.4e-10 67.8 83 50.6
vmacro12189 Vaccinium macrocarpon HOM05D000304 ORTHO05D000185 1.1e-09 67.4 68 57.4
Cc05_g04000 Coffea canephora HOM05D000304 ORTHO05D000185 1.4e-09 67.0 118 40.7
Peaxi162Scf00462g00711 Petunia axillaris HOM05D000304 ORTHO05D000185 1.4e-09 67.0 115 36.5
Potri.014G155100 Populus trichocarpa HOM05D000304 ORTHO05D000185 1.4e-09 67.0 73 53.4
Sopen07g025440 Solanum pennellii HOM05D000304 ORTHO05D000185 1.4e-09 67.0 121 43.0
CAN.G198.1 Capsicum annuum HOM05D000304 ORTHO05D000185 1.9e-09 66.6 47 66.0
Thecc.01G176500 Theobroma cacao HOM05D000304 ORTHO05D000185 1.9e-09 66.6 122 40.2
GSVIVG01030453001 Vitis vinifera HOM05D000304 ORTHO05D000185 2.4e-09 66.2 110 44.5
TWI36G1117 Tripterygium wilfordii HOM05D000304 ORTHO05D000185 3.2e-09 65.9 77 46.8
Gohir.D07G191900 Gossypium hirsutum HOM05D000304 ORTHO05D000185 4.2e-09 65.5 105 39.0
Gorai.001G214800 Gossypium raimondii HOM05D000304 ORTHO05D000185 4.2e-09 65.5 105 39.0
Glyma.06G307700 Glycine max HOM05D000304 ORTHO05D000185 5.5e-09 65.1 59 59.3
Gohir.A07G185200 Gossypium hirsutum HOM05D000304 ORTHO05D000185 5.5e-09 65.1 76 51.3
Nitab4.5_0000696g0030 Nicotiana tabacum HOM05D000304 ORTHO05D000185 5.5e-09 65.1 108 42.6
Atru.chr6.3220 Acer truncatum HOM05D000304 ORTHO05D000185 7.1e-09 64.7 72 52.8
VMungo1080G0428 Vigna mungo HOM05D000304 ORTHO05D000185 7.1e-09 64.7 91 45.1
Phvul.005G116000 Phaseolus vulgaris HOM05D000304 ORTHO05D000185 9.3e-09 64.3 95 46.3
Lj3g0023899 Lotus japonicus HOM05D000304 ORTHO05D000185 1.2e-08 63.9 89 43.8
Lj3g0021430 Lotus japonicus HOM05D000304 ORTHO05D000185 1.6e-08 63.5 48 66.7
Potri.002G228400 Populus trichocarpa HOM05D000304 ORTHO05D000185 1.6e-08 63.5 79 50.6
TAR627G0821 Trochodendron aralioides HOM05D000304 ORTHO05D000185 1.6e-08 63.5 122 40.2
Ca_19497_v3 Cicer arietinum L. HOM05D000304 ORTHO05D000185 2.1e-08 63.2 66 50.0
Ciclev10014665m.g Citrus clementina HOM05D000304 ORTHO05D000185 2.1e-08 63.2 70 50.0
Dinv08756 Davidia involucrata HOM05D000304 ORTHO05D000185 2.1e-08 63.2 83 48.2
ECA236G4454 Erigeron canadensis HOM05D000304 ORTHO05D000185 2.1e-08 63.2 71 46.5
Nitab4.5_0004702g0020 Nicotiana tabacum HOM05D000304 ORTHO05D000185 2.1e-08 63.2 108 37.0
PGSC0003DMG400015015 Solanum tuberosum HOM05D000304 ORTHO05D000185 2.1e-08 63.2 119 37.0
MBI10_g35588_MAGBIO Magnolia biondii HOM05D000304 ORTHO05D000185 2.7e-08 62.8 83 49.4
Nn1g03460 Nelumbo nucifera HOM05D000304 ORTHO05D000185 3.5e-08 62.4 120 40.0
Nitab4.5_0000006g0300 Nicotiana tabacum HOM05D000304 ORTHO05D000185 3.5e-08 62.4 73 46.6
PGR142G0462 Punica granatum HOM05D000304 ORTHO05D000185 3.5e-08 62.4 72 45.8
Duzib133G0553 Durio zibethinus HOM05D000304 ORTHO05D000185 4.6e-08 62.0 121 38.0
FAN09G3742 Fragaria x ananassa HOM05D000304 ORTHO05D000185 7.9e-08 61.2 43 67.4
Phvul.011G101900 Phaseolus vulgaris HOM05D000304 ORTHO05D000185 7.9e-08 61.2 40 72.5
Actinidia09725 Actinidia chinensis HOM05D000304 ORTHO05D000185 1.0e-07 60.8 74 51.4
Actinidia02350 Actinidia chinensis HOM05D000304 ORTHO05D000185 1.3e-07 60.5 108 36.1
Duzib138G0310 Durio zibethinus HOM05D000304 ORTHO05D000185 1.3e-07 60.5 42 69.0
Lj1A769T50 Lonicera japonica HOM05D000304 ORTHO05D000185 1.3e-07 60.5 111 38.7
Lj8A126G70 Lonicera japonica HOM05D000304 ORTHO05D000185 1.3e-07 60.5 65 47.7
CiPaw.09G095400 Carya illinoinensis HOM05D000304 ORTHO05D000185 1.8e-07 60.1 87 41.4
Dinv13925 Davidia involucrata HOM05D000304 ORTHO05D000185 1.8e-07 60.1 118 34.7
FAN02G2987 Fragaria x ananassa HOM05D000304 ORTHO05D000185 1.8e-07 60.1 43 65.1
FAN05G1306 Fragaria x ananassa HOM05D000304 ORTHO05D000185 1.8e-07 60.1 43 65.1
Nn1g07216 Nelumbo nucifera HOM05D000304 ORTHO05D000185 2.3e-07 59.7 120 38.3
Dinv39725 Davidia involucrata HOM05D000304 ORTHO05D000185 3.0e-07 59.3 42 64.3
Gohir.A06G149900 Gossypium hirsutum HOM05D000304 ORTHO05D000185 3.0e-07 59.3 106 38.7
DCAR_019758 Daucus carota HOM05D000304 ORTHO05D000185 3.9e-07 58.9 39 64.1
Migut.M01342 Erythranthe guttata HOM05D000304 ORTHO05D000185 3.9e-07 58.9 66 47.0
FvH4_6g42870 Fragaria vesca HOM05D000304 ORTHO05D000185 3.9e-07 58.9 43 62.8
FAN14G5372 Fragaria x ananassa HOM05D000304 ORTHO05D000185 3.9e-07 58.9 43 62.8
Glyma.12G097100 Glycine max HOM05D000304 ORTHO05D000185 3.9e-07 58.9 48 58.3
HanXRQChr10g0306631 Helianthus annuus HOM05D000304 ORTHO05D000185 3.9e-07 58.9 69 47.8
Sabra02G0174000 Salix brachista HOM05D000304 ORTHO05D000185 3.9e-07 58.9 80 45.0
TWI18G0447 Tripterygium wilfordii HOM05D000304 ORTHO05D000185 5.1e-07 58.5 131 35.9
Aqoxy1G03103 Aquilegia oxysepala HOM05D000304 ORTHO05D000185 6.7e-07 58.2 82 43.9
Thecc.06G224800 Theobroma cacao HOM05D000304 ORTHO05D000185 6.7e-07 58.2 80 46.2
Duzib192G0983 Durio zibethinus HOM05D000304 ORTHO05D000185 8.7e-07 57.8 89 41.6
PSO541G6364 Papaver somniferum HOM05D000304 ORTHO05D000185 8.7e-07 57.8 85 41.2
PSO675G2952 Papaver somniferum HOM05D000304 ORTHO05D000185 8.7e-07 57.8 85 41.2
CANSAT64G0686 Cannabis sativa HOM05D000304 ORTHO05D000185 1.1e-06 57.4 120 49.2
CDE02G1737 Ceratophyllum demersum HOM05D000304 ORTHO05D000185 1.1e-06 57.4 71 46.5
COL.COLO4_20014 Corchorus olitorius HOM05D000304 ORTHO05D000185 1.1e-06 57.4 50 64.0
Glyma.13G310100 Glycine max HOM05D000304 ORTHO05D000185 1.1e-06 57.4 93 43.0
MD09G1111200 Malus domestica HOM05D000304 ORTHO05D000185 1.1e-06 57.4 118 37.3
TAR629G3369 Trochodendron aralioides HOM05D000304 ORTHO05D000185 1.1e-06 57.4 85 42.4
CDE09G0227 Ceratophyllum demersum HOM05D000304 ORTHO05D000185 1.5e-06 57.0 71 46.5
Lsat_1_v5_gn_5_124140 Lactuca sativa HOM05D000304 ORTHO05D000185 1.5e-06 57.0 69 43.5
Rhsim04G0052400 Rhododendron simsii HOM05D000304 ORTHO05D000185 1.5e-06 57.0 111 50.5
RcHm_v2.0_Chr2g0158801 Rosa chinensis HOM05D000304 ORTHO05D000185 1.9e-06 56.6 43 60.5
arahy.Tifrunner.gnm1.ann1.BHH2Q1 Arachis hypogaea HOM05D000304 ORTHO05D000185 2.5e-06 56.2 66 45.5
Duzib235G0103 Durio zibethinus HOM05D000304 ORTHO05D000185 2.5e-06 56.2 88 42.0
ECA234G1815 Erigeron canadensis HOM05D000304 ORTHO05D000185 2.5e-06 56.2 71 47.9
HanXRQChr04g0127081 Helianthus annuus HOM05D000304 ORTHO05D000185 2.5e-06 56.2 110 36.4
MBI07_g37844_MAGBIO Magnolia biondii HOM05D000304 ORTHO05D000185 3.3e-06 55.8 77 44.2
Sc21g0001230 Simmondsia chinensis HOM05D000304 ORTHO05D000185 3.3e-06 55.8 70 52.9
Sc21g0001290 Simmondsia chinensis HOM05D000304 ORTHO05D000185 3.3e-06 55.8 70 52.9
VMungo1127G1700 Vigna mungo HOM05D000304 ORTHO05D000185 3.3e-06 55.8 40 62.5
BcaB01g01804 Brassica carinata HOM05D000304 ORTHO05D000185 4.3e-06 55.5 82 41.5
BcaC04g21289 Brassica carinata HOM05D000304 ORTHO05D000185 4.3e-06 55.5 82 41.5
A09p26350 Brassica napus HOM05D000304 ORTHO05D000185 4.3e-06 55.5 82 41.5
C09p33510 Brassica napus HOM05D000304 ORTHO05D000185 4.3e-06 55.5 82 41.5
BolC9t56187H Brassica oleracea HOM05D000304 ORTHO05D000185 4.3e-06 55.5 82 41.5
BraA09t38208Z Brassica rapa HOM05D000304 ORTHO05D000185 4.3e-06 55.5 82 41.5
arahy.Tifrunner.gnm1.ann1.7TT8S3 Arachis hypogaea HOM05D000304 ORTHO05D000185 5.6e-06 55.1 70 45.7
DCAR_004233 Daucus carota HOM05D000304 ORTHO05D000185 5.6e-06 55.1 62 48.4
Duzib211G0305 Durio zibethinus HOM05D000304 ORTHO05D000185 7.4e-06 54.7 39 64.1
Eucgr.E04011 Eucalyptus grandis HOM05D000304 ORTHO05D000185 7.4e-06 54.7 48 60.4
Gohir.D06G156100 Gossypium hirsutum HOM05D000304 ORTHO05D000185 7.4e-06 54.7 106 38.7
Gorai.010G182500 Gossypium raimondii HOM05D000304 ORTHO05D000185 7.4e-06 54.7 106 38.7
Peaxi162Scf00294g01311 Petunia axillaris HOM05D000304 ORTHO05D000185 7.4e-06 54.7 69 44.9
Sp6g04460 Schrenkiella parvula HOM05D000304 ORTHO05D000185 7.4e-06 54.7 84 40.5
SGA_v2.0_scaffold70G23399 Striga asiatica HOM05D000304 ORTHO05D000185 7.4e-06 54.7 78 46.2
THA.LOC104806313 Tarenaya hassleriana HOM05D000304 ORTHO05D000185 7.4e-06 54.7 90 38.9
Lalb_Chr03g0028611 Lupinus albus HOM05D000304 ORTHO05D000185 9.6e-06 54.3 73 50.7


User provided reference genes

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