Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G001960 Citrullus lanatus HOM05D000008 ORTHO05D000005 2.1e-206 722.2 385 100.0
MELO3C018820.2 Cucumis melo HOM05D000008 ORTHO05D000005 2.1e-174 615.9 383 88.8
CsaV3_7G003540 Cucumis sativus L. HOM05D000008 ORTHO05D000005 1.4e-162 576.6 383 83.6
Sed0028158 Sechium edule HOM05D000008 ORTHO05D000005 1.4e-114 417.2 389 65.8
Sed0019980 Sechium edule HOM05D000008 ORTHO05D000005 1.1e-106 391.0 385 63.4
Cfa014390 Carpinus fangiana HOM05D000008 ORTHO05D000005 6.5e-51 205.7 415 45.1
QL08p032976 Quercus lobata HOM05D000008 ORTHO05D000005 7.1e-50 202.2 410 39.0
CiPaw.03G159500 Carya illinoinensis HOM05D000008 ORTHO05D000005 1.9e-42 177.6 410 38.5
Manes.13G069726 Manihot esculenta HOM05D000008 ORTHO05D000005 2.5e-39 167.2 418 35.4
Ciclev10014958m.g Citrus clementina HOM05D000008 ORTHO05D000005 4.1e-37 159.8 418 36.1
Thecc.02G365400 Theobroma cacao HOM05D000008 ORTHO05D000005 4.2e-34 149.8 408 36.3
Glyma.12G193300 Glycine max HOM05D000008 ORTHO05D000005 1.0e-32 145.2 414 36.0
Glyma.13G309200 Glycine max HOM05D000008 ORTHO05D000005 5.3e-29 132.9 416 34.6
VMungo1080G0107 Vigna mungo HOM05D000008 ORTHO05D000005 1.2e-28 131.7 411 32.4
TAR626G0194 Trochodendron aralioides HOM05D000008 ORTHO05D000005 4.5e-28 129.8 398 32.4
FAN02G4482 Fragaria x ananassa HOM05D000008 ORTHO05D000005 2.5e-26 124.0 430 35.8
Cpa.g.sc87.85 Carica papaya HOM05D000008 ORTHO05D000005 4.2e-26 123.2 443 34.3
CANSAT64G2418 Cannabis sativa HOM05D000008 ORTHO05D000005 1.0e-24 118.6 432 32.6
Phvul.005G115500 Phaseolus vulgaris HOM05D000008 ORTHO05D000005 1.0e-24 118.6 413 31.0
RcHm_v2.0_Chr2g0159111 Rosa chinensis HOM05D000008 ORTHO05D000005 2.3e-24 117.5 420 35.5
FAN05G0616 Fragaria x ananassa HOM05D000008 ORTHO05D000005 3.0e-24 117.1 420 35.5
Ca_01605_v3 Cicer arietinum L. HOM05D000008 ORTHO05D000005 3.9e-24 116.7 399 32.6
FAN09G0468 Fragaria x ananassa HOM05D000008 ORTHO05D000005 8.8e-24 115.5 430 36.0
Haze_12858 Corylus avellana HOM05D000008 ORTHO05D000005 8.2e-22 109.0 290 42.4
Duzib251G0870 Durio zibethinus HOM05D000008 ORTHO05D000005 2.4e-21 107.5 407 32.7
FvH4_6g43080 Fragaria vesca HOM05D000008 ORTHO05D000005 1.2e-20 105.1 423 34.3
Duzib248G1081 Durio zibethinus HOM05D000008 ORTHO05D000005 1.6e-20 104.8 409 36.2
FAN14G4138 Fragaria x ananassa HOM05D000008 ORTHO05D000005 1.6e-20 104.8 423 34.3
Nn1g03504 Nelumbo nucifera HOM05D000008 ORTHO05D000005 1.6e-20 104.8 390 29.2
MD09G1109900 Malus domestica HOM05D000008 ORTHO05D000005 2.6e-20 104.0 362 38.4
GSVIVG01030434001 Vitis vinifera HOM05D000008 ORTHO05D000005 3.5e-20 103.6 254 36.6
Rhsim06G0163100 Rhododendron simsii HOM05D000008 ORTHO05D000005 1.0e-19 102.1 404 32.9
Psat5g263440 Pisum sativum HOM05D000008 ORTHO05D000005 1.7e-19 101.3 401 31.4
Sabra02G0174800 Salix brachista HOM05D000008 ORTHO05D000005 6.5e-19 99.4 379 29.6
Dinv05425 Davidia involucrata HOM05D000008 ORTHO05D000005 8.5e-19 99.0 412 33.7
Prupe.3G216600 Prunus persica HOM05D000008 ORTHO05D000005 5.5e-18 96.3 424 34.0
Dinv39716 Davidia involucrata HOM05D000008 ORTHO05D000005 7.2e-18 95.9 400 32.8
TPR.G4146 Trifolium pratense HOM05D000008 ORTHO05D000005 7.2e-18 95.9 395 29.6
Medtr2g088170 Medicago truncatula HOM05D000008 ORTHO05D000005 2.1e-17 94.4 397 29.7
Lj3g0004857 Lotus japonicus HOM05D000008 ORTHO05D000005 3.6e-17 93.6 395 29.4
TAR627G0664 Trochodendron aralioides HOM05D000008 ORTHO05D000005 3.6e-17 93.6 388 30.4
Potri.002G228700 Populus trichocarpa HOM05D000008 ORTHO05D000005 6.1e-17 92.8 412 28.2
Atru.chr6.3193 Acer truncatum HOM05D000008 ORTHO05D000005 3.0e-16 90.5 270 37.8
Peaxi162Scf00007g00823 Petunia axillaris HOM05D000008 ORTHO05D000005 1.2e-12 78.6 411 27.0
CAN.G2034.1 Capsicum annuum HOM05D000008 ORTHO05D000005 2.0e-12 77.8 357 30.3
Actinidia08388 Actinidia chinensis HOM05D000008 ORTHO05D000005 2.7e-12 77.4 303 31.4
TAR624G0424 Trochodendron aralioides HOM05D000008 ORTHO05D000005 9.4e-10 68.9 393 30.3
Thhalv10016567m.g Eutrema salsugineum HOM05D000008 ORTHO05D000005 1.0e-08 65.5 441 30.8
PGR042G2684 Punica granatum HOM05D000008 ORTHO05D000005 1.0e-08 65.5 402 28.6
COL.COLO4_11249 Corchorus olitorius HOM05D000008 ORTHO05D000005 1.8e-08 64.7 358 27.7
Solyc12g005890.3 Solanum lycopersicum HOM05D000008 ORTHO05D000005 1.8e-08 64.7 359 28.4
Actinidia03604 Actinidia chinensis HOM05D000008 ORTHO05D000005 2.3e-08 64.3 281 29.9
PSO541G5014 Papaver somniferum HOM05D000008 ORTHO05D000005 2.3e-08 64.3 407 26.5
CARHR126290 Cardamine hirsuta HOM05D000008 ORTHO05D000005 3.0e-08 63.9 238 31.5
Nitab4.5_0009259g0010 Nicotiana tabacum HOM05D000008 ORTHO05D000005 4.0e-08 63.5 417 24.9
PSO675G1277 Papaver somniferum HOM05D000008 ORTHO05D000005 5.2e-08 63.2 409 26.2
PGSC0003DMG400013897 Solanum tuberosum HOM05D000008 ORTHO05D000005 5.2e-08 63.2 359 29.0
Sp4g14830 Schrenkiella parvula HOM05D000008 ORTHO05D000005 8.8e-08 62.4 418 28.5
PGSC0003DMG400028949 Solanum tuberosum HOM05D000008 ORTHO05D000005 8.8e-08 62.4 416 26.9
Aqoxy1G02100 Aquilegia oxysepala HOM05D000008 ORTHO05D000005 2.6e-07 60.8 404 29.5
Sopen12g001840 Solanum pennellii HOM05D000008 ORTHO05D000005 2.6e-07 60.8 353 28.6
SalBow7G2498 Salvia bowleyana HOM05D000008 ORTHO05D000005 3.4e-07 60.5 391 27.4
Sopen07g025920 Solanum pennellii HOM05D000008 ORTHO05D000005 7.5e-07 59.3 420 26.4
Lsat_1_v5_gn_7_92401 Lactuca sativa HOM05D000008 ORTHO05D000005 9.8e-07 58.9 408 27.7
PSO210G5549 Papaver somniferum HOM05D000008 ORTHO05D000005 9.8e-07 58.9 394 24.9
SGA_v2.0_scaffold34G13861 Striga asiatica HOM05D000008 ORTHO05D000005 2.2e-06 57.8 404 26.2
BolC3t14503H Brassica oleracea HOM05D000008 ORTHO05D000005 2.8e-06 57.4 346 29.2
BcaC01g05905 Brassica carinata HOM05D000008 ORTHO05D000005 6.3e-06 56.2 346 28.9
C03p21200 Brassica napus HOM05D000008 ORTHO05D000005 8.3e-06 55.8 346 28.9


User provided reference genes

Program Settings