Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 1.2e-43 179.5 95 100.0
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 1.0e-42 176.4 95 97.9
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 1.8e-42 175.6 95 95.8
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 1.9e-36 155.6 95 86.3
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 1.9e-36 155.6 95 85.3
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 4.2e-36 154.5 93 84.9
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 4.2e-36 154.5 95 86.3
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 4.2e-36 154.5 95 86.3
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 4.2e-36 154.5 95 86.3
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.6e-35 152.5 95 84.2
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.1e-35 152.1 95 84.2
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.1e-35 152.1 95 84.2
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 3.6e-35 151.4 95 85.3
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 4.7e-35 151.0 95 83.2
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.7e-35 151.0 95 83.2
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 4.7e-35 151.0 95 84.2
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 7.9e-35 150.2 93 80.6
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 7.9e-35 150.2 95 83.2
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 1.0e-34 149.8 95 82.1
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 1.4e-34 149.4 95 85.3
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 1.8e-34 149.1 95 83.2
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 2.3e-34 148.7 95 78.9
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 2.3e-34 148.7 95 78.9
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 2.3e-34 148.7 88 84.1
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 3.0e-34 148.3 87 85.1
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 3.0e-34 148.3 95 82.1
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 5.2e-34 147.5 93 78.5
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 5.2e-34 147.5 93 79.6
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 5.2e-34 147.5 93 77.4
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 6.7e-34 147.1 95 82.1
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 6.7e-34 147.1 93 78.5
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 8.8e-34 146.7 93 76.3
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 1.1e-33 146.4 95 80.0
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 1.5e-33 146.0 87 83.9
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 1.5e-33 146.0 95 82.1
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 2.0e-33 145.6 95 76.8
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 3.3e-33 144.8 95 81.1
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 4.4e-33 144.4 93 76.3
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 5.7e-33 144.1 87 81.6
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 5.7e-33 144.1 93 76.3
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 5.7e-33 144.1 85 82.4
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 7.4e-33 143.7 95 81.1
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 9.7e-33 143.3 92 79.3
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 9.7e-33 143.3 95 81.1
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.3e-32 142.9 87 81.6
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.7e-32 142.5 95 77.9
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.7e-32 142.5 87 82.8
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 2.2e-32 142.1 87 81.6
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 3.7e-32 141.4 95 78.9
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 4.8e-32 141.0 80 87.5
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 4.8e-32 141.0 95 77.9
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 4.8e-32 141.0 95 77.9
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 4.8e-32 141.0 95 77.9
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 4.8e-32 141.0 85 78.8
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 4.8e-32 141.0 87 81.6
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 6.3e-32 140.6 85 83.5
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 6.3e-32 140.6 95 77.9
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 6.3e-32 140.6 95 76.8
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 6.3e-32 140.6 95 76.8
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 6.3e-32 140.6 93 76.3
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 1.1e-31 139.8 88 80.7
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.4e-31 139.4 87 80.5
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 4.1e-31 137.9 93 78.5
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 4.1e-31 137.9 87 79.3
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 4.1e-31 137.9 87 79.3
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 4.1e-31 137.9 95 76.8
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 4.1e-31 137.9 87 78.2
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 7.0e-31 137.1 87 79.3
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 9.1e-31 136.7 93 76.3
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 2.0e-30 135.6 83 81.9
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 3.5e-30 134.8 91 74.7
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 3.5e-30 134.8 91 74.7
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 3.5e-30 134.8 91 74.7
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 3.5e-30 134.8 93 73.1
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 3.5e-30 134.8 87 78.2
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 7.7e-30 133.7 89 75.3
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 1.0e-29 133.3 91 73.6
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 1.0e-29 133.3 91 74.7
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.7e-29 132.5 85 77.6
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 2.2e-29 132.1 95 73.7
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 2.9e-29 131.7 85 77.6
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 3.8e-29 131.3 96 72.9
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 6.5e-29 130.6 91 73.6
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 8.5e-29 130.2 91 75.8
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 8.5e-29 130.2 91 75.8
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 2.5e-28 128.6 93 67.7
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 5.5e-28 127.5 94 71.3
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 9.4e-28 126.7 84 73.8
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 9.4e-28 126.7 92 75.0
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 2.3e-26 122.1 93 67.7
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 4.0e-26 121.3 81 75.3
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 3.3e-25 118.2 74 83.8
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 4.4e-25 117.9 98 63.3
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 4.4e-25 117.9 158 45.6
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 7.5e-25 117.1 73 79.5
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 9.7e-25 116.7 90 68.9
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 9.7e-25 116.7 95 64.2
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 2.2e-24 115.5 72 79.2
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 3.7e-24 114.8 73 83.6
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 8.2e-24 113.6 72 76.4
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.1e-23 113.2 74 82.4
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.1e-23 113.2 68 83.8
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 2.4e-23 112.1 74 79.7
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 3.1e-23 111.7 74 82.4
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 7.0e-23 110.5 74 78.4
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 9.1e-23 110.2 96 62.5
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 1.6e-22 109.4 69 81.2
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 5.9e-22 107.5 66 80.3
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 1.0e-21 106.7 74 78.4
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 1.1e-20 103.2 75 73.3
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 2.5e-20 102.1 66 74.2
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 9.4e-20 100.1 80 65.0
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 1.2e-19 99.8 91 59.3
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 1.2e-17 93.2 79 62.0
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 2.8e-16 88.6 63 69.8
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 6.3e-16 87.4 110 50.0


User provided reference genes

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