Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 4.1e-117 424.9 233 100.0
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 1.0e-99 367.1 217 90.8
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 2.5e-98 362.5 217 88.5
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 9.9e-63 244.2 217 67.3
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 1.3e-51 207.2 188 62.8
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 6.7e-51 204.9 130 75.4
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 3.3e-50 202.6 139 72.7
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 4.3e-50 202.2 138 75.4
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 1.6e-49 200.3 176 62.5
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.1e-49 199.9 130 74.6
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 6.2e-49 198.4 177 61.0
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 6.2e-49 198.4 130 74.6
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 8.2e-49 198.0 229 56.3
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.1e-48 197.6 223 55.2
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 1.4e-48 197.2 171 66.7
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 6.9e-48 194.9 170 58.8
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.6e-47 193.0 130 72.3
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 2.6e-47 193.0 232 57.3
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 4.5e-47 192.2 217 56.2
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 7.6e-47 191.4 144 66.7
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 7.6e-47 191.4 107 84.1
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 2.9e-46 189.5 129 72.1
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 2.9e-46 189.5 220 59.1
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 3.8e-46 189.1 134 72.4
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 6.5e-46 188.3 209 51.7
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 1.4e-45 187.2 132 72.7
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 1.4e-45 187.2 125 72.0
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 1.9e-45 186.8 125 72.0
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 3.2e-45 186.0 108 84.3
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 4.2e-45 185.7 135 66.7
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 5.5e-45 185.3 216 50.5
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 5.5e-45 185.3 143 65.0
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 5.5e-45 185.3 143 65.0
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 7.1e-45 184.9 126 69.8
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 7.1e-45 184.9 132 68.2
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 1.2e-44 184.1 140 65.7
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 1.6e-44 183.7 129 70.5
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.6e-44 183.7 143 64.3
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 2.1e-44 183.3 114 77.2
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 2.1e-44 183.3 135 68.1
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 2.1e-44 183.3 138 65.9
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 3.5e-44 182.6 115 75.7
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 3.5e-44 182.6 131 67.9
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 4.6e-44 182.2 138 65.2
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 4.6e-44 182.2 98 84.7
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.6e-44 182.2 98 84.7
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 6.0e-44 181.8 126 68.3
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 7.9e-44 181.4 131 67.9
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 1.0e-43 181.0 128 69.5
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 1.3e-43 180.6 125 70.4
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 1.8e-43 180.3 103 79.6
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 2.3e-43 179.9 131 67.2
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 2.3e-43 179.9 101 81.2
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 2.3e-43 179.9 122 71.3
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 3.0e-43 179.5 131 67.2
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 3.0e-43 179.5 131 67.2
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 3.0e-43 179.5 100 83.0
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 3.0e-43 179.5 109 76.1
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 5.1e-43 178.7 126 66.7
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 5.1e-43 178.7 112 72.3
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 5.1e-43 178.7 138 63.8
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 1.1e-42 177.6 105 75.2
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.5e-42 177.2 105 78.1
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 2.5e-42 176.4 169 59.2
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 3.3e-42 176.0 121 69.4
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 4.3e-42 175.6 143 61.5
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 5.7e-42 175.3 105 74.3
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 7.4e-42 174.9 134 61.9
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 7.4e-42 174.9 100 79.0
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 1.6e-41 173.7 129 67.4
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 1.6e-41 173.7 114 71.9
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 2.2e-41 173.3 122 67.2
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 3.7e-41 172.6 131 65.6
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 6.3e-41 171.8 98 81.6
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 1.8e-40 170.2 101 74.3
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 6.9e-40 168.3 222 48.6
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 9.0e-40 167.9 105 76.2
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 9.0e-40 167.9 132 58.3
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 1.2e-39 167.5 222 49.5
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 4.5e-39 165.6 105 74.3
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 3.2e-37 159.5 142 56.3
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 7.2e-37 158.3 100 72.0
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 7.2e-37 158.3 135 58.5
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 1.6e-36 157.1 91 78.0
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 3.6e-36 156.0 109 66.1
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 1.8e-35 153.7 123 63.4
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 3.0e-35 152.9 103 68.9
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 3.9e-35 152.5 116 64.7
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 8.7e-35 151.4 103 67.0
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.9e-34 150.2 124 62.1
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.9e-34 150.2 124 62.1
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 2.5e-34 149.8 116 62.1
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 3.3e-34 149.4 103 65.0
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 3.3e-34 149.4 133 54.9
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 4.3e-34 149.1 91 78.0
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 1.3e-33 147.5 84 83.3
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 1.1e-32 144.4 102 65.7
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 1.4e-32 144.1 84 82.1
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 1.4e-32 144.1 83 81.9
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 3.1e-32 142.9 109 62.4
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 4.1e-32 142.5 102 60.8
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 6.9e-32 141.7 102 64.7
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 1.9e-29 133.7 97 61.9
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 4.2e-29 132.5 84 73.8
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 1.2e-28 131.0 132 53.0
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 2.2e-25 120.2 86 64.0
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 8.2e-25 118.2 104 53.8
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 7.7e-23 111.7 108 51.9
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 1.4e-21 107.5 115 50.4
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 1.1e-13 81.3 123 42.3
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 2.5e-13 80.1 223 39.9
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 2.5e-13 80.1 48 72.9
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 1.6e-07 60.8 136 28.7
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 8.5e-06 55.1 79 38.0


User provided reference genes

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