Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.6e-71 271.2 141 100.0
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.4e-48 196.4 121 82.6
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 7.1e-48 194.1 122 80.3
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 5.8e-42 174.5 110 80.0
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.5e-18 96.7 125 47.2
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 3.4e-18 95.5 127 44.9
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 4.5e-18 95.1 126 43.7
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 1.3e-17 93.6 109 47.7
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 2.9e-17 92.4 126 48.4
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.1e-16 90.5 131 45.8
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 6.1e-15 84.7 130 44.6
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.4e-14 83.6 130 44.6
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.8e-14 83.2 131 41.2
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.0e-14 82.4 129 41.1
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.9e-14 82.0 131 41.2
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 5.2e-14 81.6 121 43.8
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.1e-13 80.5 128 39.8
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 1.1e-13 80.5 119 46.2
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.1e-13 80.5 134 42.5
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.5e-13 80.1 113 43.4
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.5e-13 80.1 119 45.4
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 1.5e-13 80.1 123 41.5
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 2.0e-13 79.7 101 49.5
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.6e-13 79.3 131 44.3
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 3.3e-13 79.0 125 40.8
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 3.3e-13 79.0 118 43.2
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 4.4e-13 78.6 107 45.8
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 5.7e-13 78.2 130 44.6
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 5.7e-13 78.2 120 45.8
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 5.7e-13 78.2 130 40.8
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 2.8e-12 75.9 109 42.2
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.8e-12 75.9 123 43.1
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 3.7e-12 75.5 142 36.6
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 6.3e-12 74.7 119 39.5
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 8.2e-12 74.3 128 36.7
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 3.1e-11 72.4 120 39.2
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 3.1e-11 72.4 115 40.9
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 4.1e-11 72.0 123 35.8
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 4.1e-11 72.0 126 40.5
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 5.3e-11 71.6 127 42.5
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 5.3e-11 71.6 118 37.3
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 3.5e-10 68.9 134 38.8
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 4.5e-10 68.6 109 37.6
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 7.7e-10 67.8 121 38.0
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 1.0e-09 67.4 109 41.3
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.0e-09 67.4 139 36.7
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.3e-09 67.0 113 38.1
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.7e-09 66.6 114 41.2
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.9e-09 65.9 129 38.8
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 2.9e-09 65.9 114 35.1
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 2.9e-09 65.9 124 38.7
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 6.5e-09 64.7 125 39.2
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 6.5e-09 64.7 108 39.8
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 8.5e-09 64.3 109 44.0
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.5e-08 63.5 129 38.0
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 1.5e-08 63.5 98 37.8
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.5e-08 63.5 124 39.5
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 1.9e-08 63.2 125 34.4
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 2.5e-08 62.8 119 37.8
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 2.5e-08 62.8 112 37.5
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 3.2e-08 62.4 95 41.1
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 3.2e-08 62.4 111 39.6
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 4.2e-08 62.0 117 41.0
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 4.2e-08 62.0 109 36.7
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.2e-08 62.0 101 36.6
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 4.2e-08 62.0 117 36.8
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 4.2e-08 62.0 124 37.1
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 7.2e-08 61.2 134 32.1
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 9.4e-08 60.8 125 37.6
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.2e-07 60.5 118 37.3
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 1.2e-07 60.5 116 36.2
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 1.6e-07 60.1 112 39.3
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 2.1e-07 59.7 132 34.1
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 2.1e-07 59.7 132 34.1
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 2.1e-07 59.7 133 36.1
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 2.1e-07 59.7 132 34.1
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 2.7e-07 59.3 133 36.8
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 2.7e-07 59.3 89 37.1
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.7e-07 59.3 107 35.5
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.7e-07 59.3 120 41.7
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 3.6e-07 58.9 125 35.2
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 3.6e-07 58.9 119 30.3
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 4.7e-07 58.5 135 36.3
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 4.7e-07 58.5 113 36.3
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 6.1e-07 58.2 132 33.3
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 6.1e-07 58.2 97 39.2
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 8.0e-07 57.8 131 33.6
THA.LOC104806292 Tarenaya hassleriana HOM05D001059 ORTHO05D000873 8.0e-07 57.8 121 33.9
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 1.0e-06 57.4 132 36.4
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 1.0e-06 57.4 136 36.0
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.0e-06 57.4 105 36.2
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.4e-06 57.0 113 35.4
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 1.8e-06 56.6 116 33.6
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 2.3e-06 56.2 113 31.9
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 3.0e-06 55.8 102 38.2
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 8.8e-06 54.3 118 36.4


User provided reference genes

Program Settings