Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 6.7e-146 520.8 283 100.0
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 5.3e-135 484.6 305 87.5
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 1.5e-134 483.0 305 87.5
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.1e-108 397.1 297 75.4
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 6.1e-107 391.3 297 74.4
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 1.0e-106 390.6 304 75.0
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 1.8e-106 389.8 290 76.6
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 4.0e-106 388.7 296 75.7
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 6.7e-106 387.9 296 76.0
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 6.7e-106 387.9 292 75.0
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.5e-105 386.7 290 75.9
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 4.4e-105 385.2 307 72.3
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 1.3e-104 383.6 292 75.7
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 1.2e-102 377.1 296 74.0
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 7.7e-102 374.4 287 75.6
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 1.0e-101 374.0 295 73.9
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 1.3e-101 373.6 283 75.6
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 1.7e-101 373.2 303 71.6
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 2.9e-101 372.5 294 72.1
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 6.5e-101 371.3 300 72.0
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 6.5e-101 371.3 308 71.1
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 1.1e-100 370.5 291 73.9
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 1.1e-100 370.5 312 70.8
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 1.5e-100 370.2 299 69.9
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.9e-100 369.8 289 72.3
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 2.5e-100 369.4 284 76.1
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 7.2e-100 367.9 303 70.0
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 1.2e-99 367.1 293 73.7
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 2.1e-99 366.3 291 73.2
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 4.7e-99 365.2 295 72.5
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 1.4e-98 363.6 300 71.7
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 1.8e-98 363.2 293 72.7
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 2.3e-98 362.8 295 71.9
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 3.0e-98 362.5 287 73.9
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 5.2e-98 361.7 307 70.7
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 5.2e-98 361.7 290 73.8
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 6.8e-98 361.3 300 71.3
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 1.5e-97 360.1 310 70.0
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 2.0e-97 359.8 295 72.9
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 2.6e-97 359.4 291 72.5
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 9.8e-97 357.5 303 68.6
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 1.3e-96 357.1 295 71.2
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 1.7e-96 356.7 307 68.7
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 2.2e-96 356.3 299 69.6
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 4.8e-96 355.1 292 71.9
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 4.8e-96 355.1 309 69.9
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 6.3e-96 354.8 290 71.0
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 8.3e-96 354.4 297 70.0
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.1e-95 354.0 307 68.4
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 3.1e-95 352.4 292 71.6
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 3.1e-95 352.4 305 67.5
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 4.1e-95 352.1 290 70.0
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 4.1e-95 352.1 294 70.7
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 1.2e-94 350.5 293 69.6
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 1.2e-94 350.5 287 71.1
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 2.0e-94 349.7 308 68.5
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 3.5e-94 349.0 314 65.0
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 1.3e-93 347.1 298 69.5
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 2.9e-93 345.9 308 67.9
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 8.6e-93 344.4 283 68.9
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 1.5e-92 343.6 313 65.8
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 9.5e-92 340.9 288 67.7
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 8.0e-91 337.8 300 65.7
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 1.4e-90 337.0 296 66.2
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 1.8e-90 336.7 282 69.1
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 4.0e-90 335.5 286 68.5
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 7.5e-89 331.3 266 71.8
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 1.1e-87 327.4 275 70.9
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 4.1e-87 325.5 220 81.4
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 1.2e-86 323.9 301 63.1
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 5.0e-85 318.5 278 65.8
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 2.1e-83 313.2 286 64.7
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 8.0e-83 311.2 283 62.5
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 8.0e-83 311.2 282 63.8
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 2.9e-80 302.8 290 62.4
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 7.3e-76 288.1 238 67.2
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 2.6e-73 279.6 236 67.4
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 2.6e-73 279.6 211 69.2
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 5.8e-73 278.5 284 59.9
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 2.5e-68 263.1 174 81.0
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 5.8e-65 251.9 169 81.1
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 1.2e-57 227.6 163 73.0
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.1e-55 221.1 144 84.0
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 2.3e-53 213.4 193 67.4
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 5.1e-53 212.2 139 84.9
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 1.4e-50 204.1 244 51.6
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 3.2e-47 193.0 268 53.4
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 9.6e-44 181.4 204 55.9
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 5.8e-41 172.2 125 79.2
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 3.8e-32 142.9 97 76.3
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 4.2e-31 139.4 159 56.6
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 2.2e-24 117.1 119 58.8
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 3.9e-21 106.3 130 53.1
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 2.7e-14 83.6 52 88.5


User provided reference genes

Program Settings